Pseudolactococcus carnosus: BHS00_08110
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Entry
BHS00_08110 CDS
T07226
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
lcar
Pseudolactococcus carnosus
Pathway
lcar03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lcar00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BHS00_08110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcar03021
]
BHS00_08110
03400 DNA repair and recombination proteins [BR:
lcar03400
]
BHS00_08110
Enzymes [BR:
lcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BHS00_08110
Transcription machinery [BR:
lcar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BHS00_08110
DNA repair and recombination proteins [BR:
lcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BHS00_08110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
QDJ26512
LinkDB
All DBs
Position
complement(1696934..1700560)
Genome browser
AA seq
1208 aa
AA seq
DB search
MVDVNKFESMQIGIASPQKIRFWSFGEVKKPETINYRTQKPEREGLFDERIFGPSKDWEC
SCGKLKGVFYKNQVCELCGVQVTRAKVRRERMGHIELAAPTSHIWYFKGIPSRMGLALDM
SARSLEEIIYFASYVVIDPKETALEKKQLLTEREYREQMLKNGFGSFVAKMGAEAIQDLL
MAVNLPAEISALKEELQTATGQKRVKAIRRLDVLDAFNKSSNKLEWMVLNVLPVIPPDLR
PMVQLDGGRFATSDLNDLYRRVINRNNRLKRLMELNAPNIIVQNEKRMLQEAVDALVDNG
RRGRPITGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPTLKMYQCGVPR
EMAIELFKPFVMSEVVKRDMAPNIRAAKRKVERQDPDVWDVLEDVIKEHPVLLNRAPTLH
RLGIQAFEPVLIDGRAIRLHPLVCEAYNADFDGDQMAIHLPLSEEAQAEARILMLAAEHI
LNPKDGKPVVTPSQDMVLGNYYITMEEAGREGEGMVFANADEAEVAWRNGFVHLHTRVGI
ATKSLNKPWTDDQNDKIMATTVGKVLFNAIMPEEFPYLNEPTQDNLTAQTDDRFFMAPGE
NVKAFIENLDLVPPFKKKHLGNIIAEVFKRFRTTLTSEMLDRLKDLGYHHSTKAGLTVGI
ADIPVVEDKHLIIDAAHDKVAMITKQFRRGLITDDERYTAVTDVWRGAKEELEHRLIDAQ
DMSNPIVMMMDSGARGNISNFSQLAGMRGLMAAPNGKIMELPIISNFREGLSVLEMFFST
HGARKGMTDTALKTADSGYLTRRLVDVAQDVIIREDDCGSDRGLVISDIATGKEMVEPLS
ERLNGRYTRKSLVHPETGELIIGEDALITEAIAAQIIAADIKEVTIRSVFTCKTRHGVCK
HCYGVNLATGDAVEVGEAVGTIAAQSIGEPGTQLTMRTFHTGGVASSEDITQGLPRIQEI
FEARNPKGEAVITEVTGEVIEITEEAATRKKEVTVKGETDTRTYEVPFASRMHVEVGDFI
HRGTPLTEGSIQPKHLLQVRDTLSVETYLLGEVQKVYRSQGVEIGDKHIEVMVRQMLRKV
RVMDAGDTDLLPGTLMDIGDFEQANQQILFDGGVPATSRPVLMGITKASLETNSFLSAAS
FQETTRVLTDAAIRGKKDPLLGLKENVIIGKIIPAGTGMARYRNLEPLAKKTEAPVLETE
AVVEEVTD
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggtagatgtaaataaatttgagagtatgcaaattgggattgcatcccctcaaaaaatc
cgtttttggtcttttggtgaagtcaaaaaacctgaaacaattaactatcggacacaaaaa
ccagaacgtgaaggcctttttgatgaacgtatctttggtccatctaaagattgggaatgt
agctgtgggaaacttaaaggtgttttctacaaaaaccaagtctgtgaactctgtggtgta
caagttacacgtgcaaaagtacgtcgcgaacgtatggggcatattgagttagcagcgcca
acgtcacatatctggtactttaaaggtatcccatcacgtatgggtctagccttggatatg
agtgcacgttctcttgaagaaattatctattttgcaagttatgtggtcattgatccaaaa
gagacagcacttgagaaaaaacaattattgactgaacgcgagtatcgtgaacaaatgctc
aagaacggttttggttcatttgttgctaaaatgggtgctgaagcgattcaagacttattg
atggctgttaacttacctgctgaaatttctgcacttaaagaagaattacaaacagcaact
ggtcaaaaacgggttaaagcgattcgtcgtttggacgttttagatgcctttaacaaatca
agcaataaactagagtggatggttcttaacgtcttaccagttatcccaccggacttgcgt
ccgatggtacaacttgatggtggtcgttttgcgacgtcagacttgaatgatttataccgt
cgtgttatcaaccggaacaaccgtttgaaacgcttgatggaattaaatgcaccgaatatc
attgttcaaaatgaaaaacggatgttacaagaagccgttgatgccttggttgataacggt
cgtcgtggtcgtccaatcactggaccgggtaaccgcccacttaaatcacttagccatatg
ttaaaagggaaacaaggtcgtttccgtcaaaacttacttggtaaacgtgtcgactactct
ggtcgttcagttatcgtcgtaggtccgacattgaaaatgtatcaatgtggtgtcccacgt
gaaatggcaatcgaattgtttaaaccattcgtcatgagcgaagtggttaaacgtgatatg
gcaccaaatatccgtgctgcaaaacgtaaagttgagcgccaggatccagatgtttgggat
gtattggaagatgtgattaaagagcatccagtattgcttaaccgcgcaccgacacttcac
cgtcttggtatccaagcctttgaaccagtattgatcgatggtcgtgcgattcgtcttcac
ccacttgtatgtgaagcctacaatgccgatttcgatggtgaccaaatggcgattcactta
ccactttctgaagaagcccaagcagaagcacgtattttaatgcttgctgctgagcatatt
ctaaacccgaaagacggtaagccagtcgttacaccatcacaggatatggtcttgggtaac
tactacatcaccatggaagaagcgggtcgtgaaggcgaaggcatggtatttgctaacgct
gatgaagccgaagtagcttggcgcaatgggttcgttcacctgcacacacgtgttggtatc
gcaaccaaatcattgaacaagccttggactgatgaccaaaatgataaaatcatggcgaca
actgttggtaaagtacttttcaacgcgatcatgcctgaagaattcccttacttgaatgag
ccaacacaagataatttaacagcgcaaactgatgaccgtttctttatggcaccaggtgaa
aatgttaaggcctttatcgaaaatcttgacttggtaccaccatttaagaaaaaacattta
ggaaatatcatcgcagaagtcttcaaacgtttccgtacgacattgacttctgaaatgctt
gaccgtttgaaagacttagggtaccatcactcaactaaagccggtttaactgtaggtatt
gcagatatccctgttgttgaagacaagcatttgattattgatgctgcccatgataaagtt
gccatgattaccaagcaattccgtcgtggtttgatcactgatgacgaacggtatacagca
gttacagatgtctggcgtggtgctaaagaagaacttgagcatcgattaattgatgcccag
gatatgtcaaatccgatcgttatgatgatggactctggtgcccgtggtaatatctccaac
ttctcccaacttgcggggatgcgtggattgatggcagcgccgaatggtaaaatcatggag
cttccaattatctctaacttccgtgaaggcctatccgttttggaaatgttcttctctacc
catggtgcccgtaaagggatgaccgatacggcccttaaaacagccgattctggttacttg
acacgtcgtttggttgacgttgcccaggatgtcatcattcgtgaagatgattgtggctct
gaccgtggacttgtcattagcgatatcgcgactggtaaagaaatggttgaaccattgtca
gaacgtcttaacggtcgttatacacgtaaatcactcgtgcatcctgaaactggtgaatta
atcatcggtgaagatgcgttgattactgaagcaattgctgcacaaatcattgcagctgat
atcaaagaagtaacaatccgttcagtctttacatgtaaaacacgtcatggtgtatgtaaa
cattgttatggtgttaacttagcaacaggcgatgctgttgaagttggtgaagcagttggt
acaattgcagcccaatctatcggtgaacctggtacacagttgacaatgcgtaccttccac
acgggtggtgtagcatcatctgaagatatcacacaaggtctccctcgtatccaagaaatc
tttgaagcgcgtaaccctaaaggggaagcagtgattactgaggtaaccggtgaagtcatc
gaaattactgaagaagctgcgacacgtaaaaaagaagtgacggttaaaggcgaaacagat
acaagaacatacgaagtgccatttgcatcacgtatgcatgttgaagttggtgactttatc
caccgtggtacaccgttaactgaaggctctattcaacctaaacacttgcttcaagttcgt
gatacactttcagttgaaacgtatctccttggggaagtgcaaaaagtttatagaagtcaa
ggggttgaaatcggcgacaaacatatcgaagttatggtgcgtcaaatgctccgtaaagtt
cgtgtgatggatgctggtgatacagatctcttgcctggtactctgatggatattggtgat
ttcgaacaggccaaccaacaaattctatttgatggtggtgtacctgcgacatctcgtcct
gtccttatggggattactaaagcatctcttgaaacaaattcattcttatctgctgcatca
ttccaggaaacaactcgagtgcttacagatgctgcgattcgtggtaagaaagacccatta
cttggtctcaaagaaaatgttatcattggtaaaatcatcccagctggtactggtatggca
cgctatcgtaatcttgaaccactagcaaaaaaaactgaagcgccagttctcgaaacagag
gctgttgttgaagaagtaactgattaa
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integrated database retrieval system
