Pseudolactococcus carnosus: BHS00_08780
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Entry
BHS00_08780 CDS
T07226
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lcar
Pseudolactococcus carnosus
Pathway
lcar03030
DNA replication
lcar03410
Base excision repair
lcar03420
Nucleotide excision repair
lcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHS00_08780
03410 Base excision repair
BHS00_08780
03420 Nucleotide excision repair
BHS00_08780
03440 Homologous recombination
BHS00_08780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcar03032
]
BHS00_08780
03400 DNA repair and recombination proteins [BR:
lcar03400
]
BHS00_08780
Enzymes [BR:
lcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHS00_08780
DNA replication proteins [BR:
lcar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BHS00_08780
DNA repair and recombination proteins [BR:
lcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BHS00_08780
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHS00_08780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QDJ26633
LinkDB
All DBs
Position
complement(1837566..1840181)
Genome browser
AA seq
871 aa
AA seq
DB search
MTNTEKNLLLIDGSSIAFRAFFALYTQIDRFVAPSGLHTNAIFAFHTMLRNVLDKVQPTH
VLVAFDAGKTTFRTEMFADYKAGRAKTPDEFREQMPFIKEMLEAQGITHYDLTNFEADDI
IGTLATQAEKAGFDKVTVVSGDRDLTQLTTEKTTVEITIKGVAELETYTPAYLNEKLGLT
TEQFIDLKALMGDKSDNIPGVTKIGEKTGIKLLLEYGSLAGIYDHVDQMKTSKMKENLIN
DREQAFLSRELATIDLDSPIKIGLDETLYQGADYDKLKAFYKEMGFHKFLEDLEGVTEKV
VEVIDFTVITDKPSPDMFHEDQFFYLEILGDDYHRDEIIGFAWGDDKQIYVSKDTSLLAA
ISFPKNTFDFKKNKVLLARQGIDYPLVSFDTMLAKYLYSTIENNKISTIADLFGYDLADD
ELVYGKGAKRAVPEDAVLFDHLARKIAALVKTKTPLVDKLRENDQEKLLSDIELPLANVL
AKMEITGIKVSGGVLSEIGLENEQVIKALTAEIYELAGEPFNINSPKQLGVILFEKMGLP
AIKKTKTGYSTAVDVLEQLAAQAPIVDKILKFRQISKIQSTYVTGLLGEIMADGKIHTRY
VQDLTQTGRLSSVQPNLQNIPVRLPEGRKIRKAFLPENTDSVLLSSDYSQIELRVLAHIS
GDEHLISAFQKGADIHTSTAMRVFGIDKPEDVTANDRRNAKAVNFGVVYGISDFGLSNNL
GISRKAAKTYIETYFERYPDIKNYMENSVRSARDTGFVETLYHRRRNLPDINARNFSVRS
FAERTAINSPIQGSAADILKVAMINLDKALQAGNYQAKMLLQVHDEIVLDVPNEELSAVQ
ALVKLTMEDAITLAVPLLVDENSGKTWYEAK
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatacagaaaaaaacttactcttaatcgatggttcctcgatcgcctttcgtgct
ttttttgcactctatacacagattgatcgctttgttgcaccatcagggttgcatactaat
gccatttttgcctttcatacgatgttgcgaaatgttttagataaggtgcaaccgacccat
gtcctggttgcttttgatgctgggaaaacgacctttagaactgagatgtttgcagattac
aaagcaggccgtgctaagaccccggatgaatttagagagcagatgccttttattaaggaa
atgcttgaagcacaagggattacccattatgaccttactaattttgaagcagatgatatt
atcggtaccttggcaacccaggctgagaaagctggctttgacaaagtcacagtcgtatct
ggtgaccgagatttaactcagttaacgacagagaaaacaacagtcgaaatcacgatcaag
ggtgttgcggaacttgagacttacacaccagcttatctgaatgaaaaacttggcttaacg
actgaacaatttattgatttaaaagccttgatgggagataaatcagataatattccgggt
gtgacaaaaatcggtgaaaagacgggtattaaactcttgcttgagtatgggtctttagca
ggtatatatgatcatgttgatcagatgaagacctctaaaatgaaagagaatctgattaat
gatcgcgaacaagccttcctatcaagggagcttgcaacgattgatctagattcacctatc
aaaatcggccttgatgagaccctctatcagggtgctgattacgataaactcaaagcattc
tataaggaaatgggcttccataaattcctagaagacttggaaggtgtgacagagaaagtt
gttgaagtcattgattttactgtgataaccgataaaccaagtcctgatatgttccatgag
gatcaatttttctacctagaaattttaggagatgactatcatcgggatgagattattggc
tttgcctggggagatgacaaacagatttatgtgtctaaagatacaagcctgctagcagct
atctctttccctaaaaatacatttgattttaagaaaaacaaagtcctactagcacgtcaa
gggatcgattatccactggttagttttgataccatgttggccaaatatctttactcgacg
attgagaataataaaatttcaaccatcgccgatttgtttggctatgatttagctgatgat
gagttggtctacggtaagggggccaagcgagctgtgccagaagatgctgtcttatttgat
catctggctaggaaaatagctgcccttgttaagacgaaaacaccattagtggataaatta
cgagaaaatgaccaagaaaaactcttgtctgatatcgaattgcccctagcaaatgtcctg
gctaagatggaaatcacagggatcaaagtgtctggtggtgtcctaagcgagattgggtta
gaaaatgagcaagtcatcaaggccttaacggcagagatttatgagcttgcgggtgaacca
tttaatatcaattctcctaagcaattgggcgtcatcttatttgaaaaaatgggtttacct
gccatcaaaaaaacaaagacgggttattcgacagctgttgatgtacttgaacaactcgca
gctcaagcgccgattgtagataaaattttaaaattccgtcagatttctaaaattcagtct
acctatgtgaccggactgctaggtgaaatcatggcagatggcaagattcatacgcgctat
gttcaggatttgacgcaaacaggtcgtttatctagtgtccaacctaatttacaaaatatt
cccgttcgtttgcccgagggacgtaaaattcgcaaagccttcctaccagaaaatacagac
tcagttttgttatcaagcgactattcacagatcgagttgcgcgtgttggctcacatctca
ggagatgaacatctgatttcagccttccaaaaaggggcagatattcatacgtcaacagcc
atgcgtgtatttgggattgataaaccagaagatgtgacagcaaatgatcgtcgtaatgca
aaagcggtcaactttggtgtggtttatggcatctcagactttggcctatccaataatctt
ggtatttctagaaaagcagccaagacctatatcgagacctattttgaacggtatccagat
atcaaaaactacatggaaaatagtgttcgaagtgctagagatacaggttttgttgaaacg
ctctatcacagacgtcgtaatttaccagatatcaatgctagaaatttctctgttcgctca
tttgctgaacggacggcgattaatagcccgattcaaggctcagcagcagatattcttaaa
gtagcgatgattaacttggacaaagccttacaagccggcaactatcaggccaaaatgcta
cttcaggtacacgatgaaattgtactagatgtaccaaatgaggagctttcagcggtacaa
gcactcgtgaaattaacgatggaggatgcgattactctcgctgttcctttactagttgat
gaaaatagtggcaaaacgtggtatgaagctaaatag
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