Noviluteimonas caseinilytica: LYSCAS_02170
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Entry
LYSCAS_02170 CDS
T07541
Symbol
rnc
Name
(GenBank) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
lcas
Noviluteimonas caseinilytica
Pathway
lcas03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
LYSCAS_02170 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcas03019
]
LYSCAS_02170 (rnc)
03009 Ribosome biogenesis [BR:
lcas03009
]
LYSCAS_02170 (rnc)
03036 Chromosome and associated proteins [BR:
lcas03036
]
LYSCAS_02170 (rnc)
Enzymes [BR:
lcas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LYSCAS_02170 (rnc)
Messenger RNA biogenesis [BR:
lcas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LYSCAS_02170 (rnc)
Ribosome biogenesis [BR:
lcas03009
]
Eukaryotic type
90S particles
RNase
LYSCAS_02170 (rnc)
Prokaryotic type
rRNA processing factors
LYSCAS_02170 (rnc)
Chromosome and associated proteins [BR:
lcas03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LYSCAS_02170 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
BCT91193
UniProt:
A0ABN6FNQ0
LinkDB
All DBs
Position
complement(213277..213957)
Genome browser
AA seq
226 aa
AA seq
DB search
MARPTDGAPRLPGVEFTDPGLLVQALTHRSAASIHNERLEFLGDALVNLIVAEALYAHWP
KADEGTLTRARAELVRESSLAAIARHMQLGEKLILGPGEMKSGGHRRDSILADALEAIIG
AIHLDAGFEACRAAVLPWFEAAIAALPPPNKLGKDGKTRLQEWVQARQKPLPVYRLLAES
GDEHAKQFSVACTLADPPMECVGEGHSRRAAEQVAAERILATLDPN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgtccgactgacggggcgccgcggctgcccggggtcgaattcaccgaccccggc
ttgctcgtccaggcgctcacccaccgcagcgccgcgtccatccacaacgagcggctggaa
ttcctcggcgacgcgctcgtcaacctgatcgtcgccgaagccctctacgcgcactggccg
aaggccgacgaaggcacgcttacccgcgcccgcgccgaactcgtgcgcgagtcctcgctg
gccgccatcgcgcggcacatgcagctgggcgaaaagctgatcctgggccccggcgagatg
aagtccggcggccatcgccgcgactcgatcctggccgacgcgctggaagcgatcatcggc
gccatccacctggatgccggcttcgaagcgtgccgcgccgccgtcctgccctggttcgaa
gcggccatcgccgcgctgccgccgcccaacaagctcggcaaggacggcaagacgcgcctg
caggaatgggtgcaggcgcgccagaagccgctgccggtctaccgcctgctggccgaatcc
ggcgacgaacacgccaagcagttcagcgtggcctgcacgctggccgatccgccgatggag
tgcgtgggcgagggacattcgcgccgcgccgccgagcaggtcgccgcggaacgcatcctc
gccacgctcgatcccaactga
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