Noviluteimonas caseinilytica: LYSCAS_02480
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Entry
LYSCAS_02480 CDS
T07541
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
lcas
Noviluteimonas caseinilytica
Pathway
lcas03030
DNA replication
lcas03430
Mismatch repair
lcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSCAS_02480
03430 Mismatch repair
LYSCAS_02480
03440 Homologous recombination
LYSCAS_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcas03032
]
LYSCAS_02480
03400 DNA repair and recombination proteins [BR:
lcas03400
]
LYSCAS_02480
Enzymes [BR:
lcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYSCAS_02480
DNA replication proteins [BR:
lcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LYSCAS_02480
DNA repair and recombination proteins [BR:
lcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LYSCAS_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
AAA
RuvB_N
AAA_22
AAA_16
DNA_pol3_tau_5
AAA_5
AAA_14
AAA_18
AAA_30
Mg_chelatase
AAA_7
nSTAND3
TsaE
AAA_assoc_2
AAA_19
PIF1
AAA_2
Rad17
Motif
Other DBs
NCBI-ProteinID:
BCT91224
LinkDB
All DBs
Position
complement(241978..243738)
Genome browser
AA seq
586 aa
AA seq
DB search
MSYLVLARKWRPKKFAELVGQEHVVRALTNALESGRVHHAFLFTGTRGVGKTTIARIFAK
SLNCERGTSAEPCGECNSCRDIDAGRFIDLLEIDAASNTGVDDVREVIDNAQYMPSRGRV
KVYLIDEVHMLSKSAFNALLKTLEEPPGHVKFLLATTDPQKLPVTVLSRCLQFNLKRLDE
AQISGQISKILDAEGIAVEPGAVRLLARAADGSLRDGLSLLDQAIAYTGGQLNDAGVATM
LGTVDRTQVAGMLDALAAGDGARLLDTVAALADFSPDWNGVLDALADALHRVQVRQLVPG
ANVEDDGIAVDVLAERLRPELVQLWYQMALNGRRDLPLAPSPRAGFEMCVLRMLAFRPGE
QGPGTGDQGPGKGESVKGPAAARAALAAAPTARKESAAAIVMPQVSAPPVAPVPVAPSPV
ASTPVAASPVSAPAPAAVPGPRSPVPGPAASAATDANLDADTWPDYVARCPLGGPARELA
AHAGFVSYDDGVLRLSLPAADDHLKAPGLVKRFADALGALLGRTPDIKFEAAPAAGETLH
QRSARERDARQVAAETAFLADPGVQRLMTGRGATLVPDSIRPFDDA
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatctcgtccttgcgcggaaatggcgaccgaagaagttcgctgaactggtcggc
caggagcacgtcgtccgtgcgctcaccaatgcgctggaaagcgggcgcgtccaccatgcg
ttcctgttcaccggcacgcgcggggtgggcaagaccacgatcgcgcgcatcttcgccaag
tcgctgaactgcgaacgcggcacgtcggccgaaccctgcggcgaatgcaattcgtgccgc
gacatcgacgccggccgcttcatcgacctgctggaaatcgacgccgccagcaacaccggc
gtggacgacgtgcgcgaggtcatcgacaacgcgcagtacatgcccagccgcggccgcgtg
aaggtctacctgatcgacgaagtccacatgctctcgaagtcggcgttcaacgcgctgctc
aagacgctggaggaaccgccgggccacgtgaagttcctgctcgccaccaccgacccgcag
aagctgccggtcaccgtgctgtcgcgctgcctgcagttcaacctcaagcgcctcgacgaa
gcgcagatctccggccagatcagcaagatcctcgacgccgaaggcatcgcggtggagccg
ggcgccgtgcgcctgctcgcgcgcgccgccgacggcagcctgcgcgatggcctgtcgctg
ctcgaccaggcgatcgcctacaccggcggccagctcaacgatgcgggcgtggcgacgatg
ctcggcacggtcgatcgcacgcaggtcgcgggcatgctcgatgcgctcgccgcgggcgac
ggcgcgcgcctgctcgatacggtggccgcgctcgcggatttctcgcccgactggaacggc
gtgctcgacgccctcgccgatgccttgcatcgcgtgcaggtgcgccagctcgtgccgggc
gcgaacgtggaagacgacggcatcgcggtcgacgtgctcgccgaacggctgcgtcccgaa
ctcgtgcagctctggtaccagatggcgctcaacggacgtcgcgatttgccgctggcgccg
agcccgcgcgcaggcttcgaaatgtgcgtgttgcggatgctggcgttccggcccggagag
cagggaccggggaccggggaccagggaccggggaagggtgaaagcgtgaagggaccggct
gccgcgcgtgcggcgttggcggctgcgccgacggcgcgcaaggaaagtgcggctgcgatc
gtgatgccgcaggtgtcggcgccgcccgttgcccccgttcctgttgcaccgtctcccgtt
gcatcgacaccagtcgcagcgtcacctgtttccgcgccggcacccgccgctgttcctggt
ccccggtccccggtccccggtcccgctgcatccgccgccaccgacgcaaacctcgacgcc
gacacctggccagactacgtcgcccgctgccccctcggtggccctgcgcgcgaactcgcc
gcgcatgccggcttcgtgtcctacgacgatggcgtgctgcgcctgtcgctgcccgccgcc
gacgatcacctgaaggccccgggcctggtgaaacgtttcgccgatgcattgggcgccttg
ctcggccgcacgcccgacatcaagttcgaagccgcgcctgccgcgggcgaaaccctgcac
cagcgcagcgcgcgcgaacgcgatgcgcgccaggtcgcggcggaaaccgcgttcctcgcc
gatcccggcgtgcagcgcctgatgaccggtcgcggcgcgacgctcgtgcccgattccatc
cgtcccttcgacgacgcctga
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