Noviluteimonas caseinilytica: LYSCAS_03630
Help
Entry
LYSCAS_03630 CDS
T07541
Symbol
rlmE
Name
(GenBank) ribosomal RNA large subunit methyltransferase E
KO
K02427
23S rRNA (uridine2552-2'-O)-methyltransferase [EC:
2.1.1.166
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcas03009
]
LYSCAS_03630 (rlmE)
Enzymes [BR:
lcas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.166 23S rRNA (uridine2552-2'-O)-methyltransferase
LYSCAS_03630 (rlmE)
Ribosome biogenesis [BR:
lcas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LYSCAS_03630 (rlmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_23
Methyltransf_31
SUV3_C
Motif
Other DBs
NCBI-ProteinID:
BCT91339
LinkDB
All DBs
Position
complement(372839..373483)
Genome browser
AA seq
214 aa
AA seq
DB search
MATRSKSSQRWLKEHFSDPFVKKAQAEGLRSRAAYKLEELVDRDKLLKPGMVVVDLGAAP
GGWSQWVRAELDRMAKGQDAAGRVIALDILEMPTLAGVEFLHGDFRDDDVLSALEFALGG
KPVDLVLSDMAPNKSGVDAVDQPRAMHLAELAMEFADRHLKPGGTFLIKLFQGVGFDDYV
RSLRQRYARVAIRKPAASRKRSPEVYALAQGRLS
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccacccgcagcaagtccagccagcgttggttgaaggaacacttctccgatcccttc
gtgaagaaggcacaggccgagggcctgcgctcgcgcgccgcgtacaagctggaggagctg
gtcgaccgcgacaagctgctcaagccgggcatggtggtggtggacctgggcgccgccccg
ggcggctggtcccagtgggtccgggccgagctggaccgcatggcgaagggccaggatgcg
gcgggccgcgtgatcgcgctcgacatcctggagatgcccaccctggccggggtggagttc
cttcatggcgatttcagggacgatgacgtgttatcggcgctggaattcgcgctgggcggg
aagcccgtggaccttgttctgtccgacatggcccccaacaagagtggtgtggacgcggtg
gaccagccgcgtgcgatgcaccttgcagaactggcgatggagttcgccgaccgccatctg
aagcccggcggtacgttcctgatcaagctgttccagggcgtgggtttcgacgattacgtg
cggtcgctccggcagcggtatgccagggtggccatccgcaagcccgcggcgtcgcgcaag
cgttcgcccgaggtttacgccctcgcgcagggcagactttcgtga
DBGET
integrated database retrieval system
