Noviluteimonas caseinilytica: LYSCAS_03710
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Entry
LYSCAS_03710 CDS
T07541
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcas03016
]
LYSCAS_03710 (truD)
Enzymes [BR:
lcas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
LYSCAS_03710 (truD)
Transfer RNA biogenesis [BR:
lcas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LYSCAS_03710 (truD)
Prokaryotic type
LYSCAS_03710 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BCT91347
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All DBs
Position
complement(377801..378850)
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AA seq
349 aa
AA seq
DB search
MPAYPEVNASPAMRAHGPAVLSARLRATPEDFRVDELDAFEASGQGEHLLLTIDKRGMNT
AFAAKRLAQWAGIPEMGVSYAGMKDRHAVTRQRFTVHLPKKVAPDLALLESDDMHVVDAH
WHARKLPRGALAGNAFVLVLRDVVGERDAIDARLQAIAARGVPNAFGVQRFGRTGDNVAQ
ALAMFGGRRVKRDQRSVLLSAARSALFNRVLDARVAAGTWDQAIDGDVWMLDGSRSVFGP
EPLDAALAERLRTFDIHPTGPLWGRGELRTTGAAQALELQALDDATSLALRTGLESEGMK
QERRALRLLPAKLQWEWQADDVLQLAFELPPGSYATTVLAEIGDFGAID
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgcttatcccgaagtgaacgcaagccccgcgatgcgtgcgcacggccccgccgtg
ttgtctgcgcgcctgcgcgcgacgccggaggatttccgcgtcgacgagctcgacgcgttc
gaggcgagcgggcagggcgagcacctgctgctgacgatcgacaagcgcgggatgaacacc
gcgttcgccgcgaagcgcctcgcgcaatgggcgggcattcccgagatgggcgtgagctac
gcgggcatgaaggatcgccacgcggtgacgcggcagcgcttcaccgtgcacttgccgaag
aaggtcgcgcccgacctggccttgctggagtcggacgacatgcacgtcgtcgacgcgcac
tggcatgcgcgcaagttgccgcgcggtgcgctggcggggaacgcgttcgtgctggtgttg
cgcgatgtcgtgggcgagcgcgatgcgatcgatgcgcgcctgcaggcgatcgcggcgcgc
ggcgtgccgaatgcgttcggcgtgcagcgcttcggtcgcaccggcgacaacgtggcgcag
gcgctggcgatgttcggcgggcggcgcgtgaagcgcgaccagcgttcggtgctgctgtcc
gcggcgcgctcggcattgttcaaccgcgtgctcgatgcgcgcgttgcggccgggacgtgg
gaccaggcgatcgatggcgacgtgtggatgctcgatggatcgcgcagcgtgttcgggccc
gaacccttggacgcggcgttggcggaacgcctgcgcacgttcgacatccatccgaccggc
ccgctgtggggccgcggcgaattgcgcacgacgggcgcggcgcaggcgctggagttgcag
gcgctggacgacgcgacctcgctggcgttgcgcaccggcctggagtcggaaggcatgaag
caggaacgccgagcgctgcgcttgctgccggcgaagctgcagtgggaatggcaagcggac
gacgtgttgcagctcgcgttcgaactgccgccgggcagttacgcgacgacggtgctggcg
gaaatcggcgatttcggcgcgatcgactag
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