Noviluteimonas caseinilytica: LYSCAS_04540
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Entry
LYSCAS_04540 CDS
T07541
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcas03009
]
LYSCAS_04540
Enzymes [BR:
lcas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LYSCAS_04540
Ribosome biogenesis [BR:
lcas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LYSCAS_04540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BCT91430
LinkDB
All DBs
Position
complement(466211..466939)
Genome browser
AA seq
242 aa
AA seq
DB search
MPGATPRHGLARALSKRGVCSRTQAAEWIRAGRVRVDGRIVRDPEFPTIAGRHRITVDEQ
PLDAAAPLYLVLNKPRGLVTTARDEHDRDTVYTCFESAGLPWIAPVGRLDKASEGLLLFS
NDPAWAARITDPATGPDKRYHVQVDRRPDDDTLDALADGILADGEPLHAKSIALLRAGDR
TAWLDIVLDEGRNRQIRRLLAAFDFDVLRLVRVAIGPLELGDLAKGAWRPLTETEVAALR
GD
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggcgccacgccccgccacggccttgcacgcgcgctgtccaagcgcggcgtgtgt
tcgcgcacgcaggccgccgaatggatccgcgcgggccgtgtgcgcgtcgacgggcgcatc
gtgcgtgatcccgaattcccaacgatcgccggccgccaccggatcacggtggacgagcaa
ccgctcgacgccgccgcgccgctctacctcgtgctcaacaagccgcgcggcctggtgacc
accgcgcgcgacgagcacgaccgcgacaccgtctatacctgtttcgaatccgccggcctg
ccttggatcgcccccgtgggccgcctcgacaaggccagcgaaggcctgctgctgttctcc
aacgatcccgcgtgggccgcgcgcatcaccgatcccgcgaccggtcccgacaagcgctac
cacgtgcaggtcgatcgccgcccggacgacgacacgctcgacgcgctcgccgacggcatc
ctcgccgacggcgaaccgttgcacgccaagtccatcgcgctgctgcgcgcaggcgatcgc
accgcgtggctcgacatcgttttggacgaaggccgcaaccggcagatccgacgtctattg
gccgcgttcgatttcgacgtgttgcgcctggtgcgcgtcgcgatcggcccgctggaactc
ggcgatctcgcgaagggcgcatggcgcccgctgaccgaaacggaagtcgccgcattgcgc
ggcgactga
DBGET
integrated database retrieval system
