Noviluteimonas caseinilytica: LYSCAS_06780
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Entry
LYSCAS_06780 CDS
T07541
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcas03009
]
LYSCAS_06780 (dbpA)
Enzymes [BR:
lcas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LYSCAS_06780 (dbpA)
Ribosome biogenesis [BR:
lcas03009
]
Prokaryotic type
rRNA helicases
LYSCAS_06780 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCT91654
LinkDB
All DBs
Position
692567..693952
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AA seq
461 aa
AA seq
DB search
MTEALEFTDLPLDPALLQGLEALGHVRMTPIQARSLPSLLAGLDVIAQAPTGSGKTAAFG
LALLSRIDLSQFRAQALVLCPTRELADQVAKQVRKLGSGMPNLKLLTLTGGVALGPQLAS
LDVHAPHVVVGTPGRVQELLRKKALDLRGIQVLVLDEADRLLDMGFEEPIREIVKATPKT
RQTLLLSATFPDAVREVARTTMREPVEVTVEGAAEAAPIEQRFYEVEPAMKPAALAGLLL
EHGANNTVVFCNMRRDTEEVVASLSHLGFSALALHGDMEKRDREEVLVCFANRSCTVLVA
SDVAARGLDIADLGAVVNYDVPHDADTYTHRIGRTGRAGRDGLALTLCTPREQPRLRVIE
EALHMRVQPQRPPMAALRANVGPRAPMATLRIDGGRTDKLRPGDIVGALTGEGGLKGDVI
GKIDVFATRSYVAIQHAHAERALKRLQDGKIKAKKFRVRRV
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccctcgaattcaccgatctcccgctcgaccccgcgttgctgcagggcctg
gaggcgctggggcacgtccgcatgacgcccatccaggcgcgcagcctgccttcgctgctc
gcgggcctggacgtcatcgcgcaggcgcccaccggcagcggcaagaccgcggcgttcggg
ctggcgttgctgtcgcgcatcgacctgtcgcagttccgcgcgcaggcgctggtgctgtgc
cccacgcgcgaactcgccgaccaggtggccaagcaggtgcgcaagctcggcagcggcatg
ccgaacctgaaactgctgacgttgacgggcggtgtcgcactcgggccgcaactcgcgtcg
ctcgatgtgcatgcaccacacgtggtggtcggtacgcccggccgcgtgcaggagttgctg
cgcaagaaggcgctggacctgcgcggcatccaggtgctcgtgctggacgaagccgatcgc
ctgctcgacatgggcttcgaagagccgatccgcgagatcgtgaaggcgacgccgaagacg
cgccagacgctgttgctgtccgcgacgttccccgacgccgtgcgcgaagtggcgcgcacc
acgatgcgcgaaccggtggaagtcacggtggagggcgcggccgaggcggcgccgatcgaa
cagcgcttctatgaagtcgaaccggcgatgaaacccgccgccctcgccggcctgctgctg
gagcacggcgccaacaacaccgtcgtgttctgcaacatgcgccgcgatacggaagaagtg
gtcgcatcgctgtcgcacctcggcttctccgcgctcgcgctgcacggcgacatggagaaa
cgcgatcgcgaggaagtgctggtgtgcttcgccaatcgcagctgcacggtgctggtggcc
agcgacgtcgcggcacgtggcctcgacatcgcggacctcggcgcggtcgtcaactacgac
gtgccgcacgacgccgacacctacacgcatcgcatcggccgcaccggccgcgccgggcgc
gatggcctggcgctcacgctgtgcacgccgcgcgagcaaccgcgcctgcgcgtgatcgaa
gaagccctgcacatgcgcgtccagccgcagcgcccgccgatggccgcgttgcgcgccaac
gtcgggccgcgtgcgccgatggcaacgctgcgcatcgacggcggacgcaccgacaagctg
cgcccgggcgacatcgtcggcgcgctcactggcgaaggcgggctcaagggcgacgtgatc
ggcaagatcgacgtgttcgccacgcgcagttacgtcgcgatccagcacgcgcacgcggag
cgcgcgttgaagcggttgcaggacgggaagatcaaggcgaagaagttccgggtgcgacgc
gtgtga
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