Noviluteimonas caseinilytica: LYSCAS_10530
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Entry
LYSCAS_10530 CDS
T07541
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcas03032
]
LYSCAS_10530 (topA)
03400 DNA repair and recombination proteins [BR:
lcas03400
]
LYSCAS_10530 (topA)
Enzymes [BR:
lcas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LYSCAS_10530 (topA)
DNA replication proteins [BR:
lcas03032
]
Prokaryotic type
DNA Topoisomerases
LYSCAS_10530 (topA)
DNA repair and recombination proteins [BR:
lcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LYSCAS_10530 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
DUF7384
HC2
Motif
Other DBs
NCBI-ProteinID:
BCT92029
LinkDB
All DBs
Position
complement(1073055..1075547)
Genome browser
AA seq
830 aa
AA seq
DB search
MAKNLLIVESPAKAKTINKYLGKDFTVLASYGHVRDLVPKEGAVDPENGFAMRYDLIEKN
EKHVDAIAKAAKGADALFLATDPDREGEAISWHIAEILRERGLLKDKTLQRVVFTEITPR
AIKEAMTQPRQIATDLVDAQQARRALDYLVGFNLSPVLWRKVQRGLSAGRVQSPALRMIV
EREEEIEAFIAREYWSIEAELAHASQAFTAKLTKLDGKKFEQFTVTDGDTAEAARERILK
AASGALHVTDVASKERKRRPAPPFTTSTLQQEAARKLGFTTKRTMQVAQKLYEGVAIGDE
GTVGLISYMRTDSVHLSVDALGELRDVIARDFGTRALPDKPNFYQTKSKNAQEAHEAVRP
TSALRTPSQVSRYLTDDERRLYELVWKRTVASQMVPAILNTVSVDLAAGSEHSFRASGTT
VIDPGFLAVYEEGKDTKTSDDEDEGRKLPAMKPGERVPLDRVHADQHFTQPPPRFTEAAL
VKALEEYGIGRPSTYASIIQTLLFRKYVEMESRSFRPSDVGRAVSNFLSSHFTRYVDYDF
TAKLEDELDAVSRGEENWVPLMEKFWGPFKELVDDKTESVDRSEATGARELGTDPKSGKP
VSVRLGRYGPYAQIGTADDEDKPTFASLRPGQSMHTISLEDSLELFKLPRKLGQDKEEEV
SVGIGRFGAFAKRGAVYASLKKEDDPYTIDLARAVFLIEEKEEIARNRVIKAFDGSDIQV
LNGRYGPYISDGRLNGRIPKDREPSSLTLDEVIKLMEETGKPMRGRFGKKVAKKAPAKKA
AVAKAPAAKKAPAKKAAKKATKKIAKKSAKKATKKVAKKAVAKQAAANPV
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaatctcctcatcgtcgagtcgcccgccaaggccaagacgatcaacaagtac
ctcggcaaggacttcaccgtcctggcctcctatggccacgtgcgcgacctggtcccgaag
gaaggcgcggtcgatcccgagaacgggttcgccatgcgctacgacctcatcgagaagaac
gaaaagcacgtcgatgcgatcgccaaggccgccaagggcgccgacgcgctgttcctcgcg
accgacccggatcgcgagggcgaggccatcagctggcacatcgcggagatcctgcgcgaa
cgcggcctgctgaaggacaagacgctgcagcgcgtggtcttcaccgagatcacgccgcgc
gccatcaaggaagcgatgacgcagccgcgccagatcgccacggacctggtcgatgcgcag
caggcgcgccgcgcgctggattacctcgtcggcttcaacctctcgcccgtgttgtggcgc
aaggtgcagcgcggcctgtccgcgggccgcgtgcagtcgccggcgctgcgcatgatcgtg
gagcgcgaggaagagatcgaagcgttcatcgcgcgcgagtactggagcatcgaagccgag
ctcgcgcacgcctcgcaggccttcaccgcgaagctgacgaaactcgacggcaagaagttc
gaacagttcaccgtcaccgacggcgacaccgccgaagccgcgcgcgaacgcatcctcaag
gccgccagcggcgcgctgcatgtcaccgacgtggcgagcaaggagcgcaagcgccgtccc
gcgccgccgttcaccacctccacgctgcagcaggaagccgcgcgcaagctcgggttcacc
accaagcgcacgatgcaggtcgcgcagaagctctatgaaggcgtggccatcggcgacgaa
ggcaccgtcggcctcatcagctacatgcgtaccgactcggtgcacctgtcggtggacgcg
ctgggcgaactgcgcgacgtgatcgcgcgcgacttcggcacgcgtgcgttgccggacaag
cccaatttctaccagaccaagtcgaagaacgcgcaggaagcgcacgaagccgtgcgtccc
acctccgcgctgcgcacgccctcgcaggtgtcgcgctacctcaccgacgacgagcgccgc
ctgtacgaactggtgtggaagcgcaccgtcgcctcgcagatggtgccggcgatcctcaac
accgtcagcgtcgacctggccgccggcagcgaacacagcttccgcgccagcggcacgacc
gtgatcgatccgggcttcctcgccgtgtacgaggaaggcaaggacaccaagaccagcgac
gacgaagacgaaggccgcaagctgccggcgatgaagcccggcgagcgcgtgccgctcgat
cgcgttcacgccgaccagcatttcacccagccgccgccgcgcttcaccgaagccgcgctg
gtgaaggcgctcgaggaatacggcatcggccgtccgtccacgtacgcctcgatcatccag
acgctgctgttccgcaagtacgtcgagatggaaagccgcagcttccgtccgagcgacgtc
ggccgcgcggtgtccaacttcctcagcagccacttcacccgctacgtcgattacgacttc
accgccaagctcgaagacgagctggatgcggtgtcgcgcggcgaggaaaactgggtgccg
ctgatggagaagttctggggcccgttcaaggaactggtggacgacaagaccgagagcgtc
gatcgctccgaggccaccggcgcccgcgaactcggcaccgatccgaaatccggcaagccg
gtcagcgtgcgcctcggccgttacgggccgtacgcgcagatcggcacggcggacgacgaa
gacaagccgacgttcgcgtcgctccgtcccggccagagcatgcacacgatctcgctcgag
gattcgctggagctgttcaagctgccgcgcaagctcgggcaggacaaggaagaagaggtg
agcgtcggcatcggccgcttcggcgcgttcgccaagcgcggcgcggtgtatgcctcgctc
aagaaggaagacgatccgtacacgatcgacctggcgcgcgcggtgttcctgatcgaagag
aaggaagagatcgcgcgcaaccgcgtcatcaaggccttcgacggcagcgacatccaggtg
ctcaacgggcgctacggtccgtacatcagcgacggccgcctcaacgggcgcatcccgaag
gatcgcgagccgagctcgttgacgctcgacgaagtgatcaagctgatggaagaaaccggc
aagccgatgcgcgggcgtttcgggaagaaggtcgccaagaaggcgccggcgaagaaggcc
gcggtcgcgaaggcgccggcggcgaagaaggcgcctgcgaagaaggccgccaagaaagcc
acgaagaagatcgcgaagaagtcggcgaagaaggcgaccaagaaggtcgcgaagaaagcg
gtcgcgaagcaggccgccgccaacccggtctga
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