Noviluteimonas caseinilytica: LYSCAS_11340
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Entry
LYSCAS_11340 CDS
T07541
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lcas
Noviluteimonas caseinilytica
Pathway
lcas03030
DNA replication
lcas03410
Base excision repair
lcas03420
Nucleotide excision repair
lcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSCAS_11340 (polA)
03410 Base excision repair
LYSCAS_11340 (polA)
03420 Nucleotide excision repair
LYSCAS_11340 (polA)
03440 Homologous recombination
LYSCAS_11340 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcas03032
]
LYSCAS_11340 (polA)
03400 DNA repair and recombination proteins [BR:
lcas03400
]
LYSCAS_11340 (polA)
Enzymes [BR:
lcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYSCAS_11340 (polA)
DNA replication proteins [BR:
lcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LYSCAS_11340 (polA)
DNA repair and recombination proteins [BR:
lcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LYSCAS_11340 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LYSCAS_11340 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
BCT92110
UniProt:
A0ABM7Q481
LinkDB
All DBs
Position
complement(1163603..1166383)
Genome browser
AA seq
926 aa
AA seq
DB search
MPRLVLIDGSSYLYRAFHALPPLTNSAGEPTGALFGVVNMLRATLAEQPDCAAFVVDAPG
KTFRDDLYPEYKANRAAMPDDLRAQIAPMCEIVQALGFPILRVDGVEADDVIGTLALEAA
RDGADVTISTGDKDFAQLVRVQGGGLGAISLVNTMSGSVLDNDGKVFDKFGVHAHQIVDM
LALMGDAVDNVPGVDKCGPKTAAKWLAEYGSLDGVMENAAKIGGKIGENLRAALPRLPLN
RELVTIKTDVALELPAKALKLRARDVDALRVLYARYGFNAALRELDGTPAPAAARKTSMR
GTEAGYARTGSAAPDGAIDPKLSEPGEYETILTRDRLDAWIAQVQAAEAFAFDTETDSLD
ALCANLVGISLAVEAGRACYIPLGHTYPGAPAQLPLADTLDALRPLFADANRRKIGQHGK
YDLHVLRCHGMDVHGYAEDTMLESFVWNAGASRHDMDSLAKRYLGYDAVKYEDVAGKGAK
QILFSQVSLEDGTRYAAEDADITLRLHSVLRPKVASEPTLDRVYREIEMPLVPVLERVEA
NGVLVDVVELKRQSADLGKRMLDAQQRATELAGRTFSLDSPKQVGQLLFEELKLPVQVKT
PSGQPSVNEEALEAIADMHELPRIILEYRGLAKLRSTYTDKLPDMVNRNTGRVHTSYHQA
GAATGRLASSDPNLQNIPIRTEDGRRIRRAFIAPAGRSIVACDYSQIELRIMAHLSEDEN
LLRAFTSGADIHRATAAEVFGKTIEEVSGNERRAAKAINFGLMYGMSAFGLARQLGIGRG
EAQDYIALYFSRYPGVRDFMERTRQEARERGFVETVFGRRLHLENIASRNQGLRAGAERA
AINAPMQGTAADIVKRAMIEIDRWLAGLGGRALMILQVHDELVFDVEDGFVDDLVDGAKA
RMAAAADLRVPLVVDAGKGANWDEAH
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgccaagactggtcctgatcgacgggtcctcgtacctgtatcgcgcgttccacgcgctt
ccccctctcaccaacagcgccggcgagcccacgggcgccctgttcggcgtcgtgaacatg
ctgcgcgccacgctggccgagcagccggactgcgccgccttcgtcgtcgacgcgcccggc
aagacgttccgtgacgacctctatcccgaatacaaggccaatcgcgccgcgatgccggac
gacctgcgcgcgcagatcgcgcccatgtgcgagatcgtgcaggcgctcggcttccccatc
ctgcgcgtggatggcgtggaagcggacgacgtgatcggcacgctcgcgctggaagccgcg
cgcgacggcgcggacgtcacgatctccaccggcgacaaggacttcgcgcagctggtgcgc
gtgcagggcggcggcctcggcgcgatctccctcgtcaacacgatgagcggcagcgtgctc
gacaacgacggcaaggtgttcgacaagttcggcgtgcacgcgcaccagatcgtcgacatg
ctcgcgctgatgggcgatgcggtcgacaacgtgcccggcgtcgacaagtgcggccccaag
acggcggcgaagtggctcgccgaatacggctcgctcgacggcgtgatggaaaacgcggcg
aagatcggcggcaagatcggcgagaacctgcgcgcggcgttgccgcggctgccgctgaat
cgcgaactggtgacgatcaagaccgacgttgcgctggaattgcccgcaaaggcgctcaag
ctgcgcgcacgcgacgtcgatgcgctgcgcgtgctgtacgcccgctacgggttcaacgcg
gccttgcgcgaactcgacggcacgcccgcgcccgcggcggcgcgcaagacctcgatgcgc
ggcaccgaagctggatacgcgcgcacgggatccgcggcgcccgacggtgcgatcgatccg
aagctgtcggaaccgggcgaatacgaaaccatcctcacgcgcgatcgcctggacgcgtgg
atcgcgcaggtgcaggccgccgaggccttcgcgttcgatacggaaaccgattcgctcgac
gcgttgtgcgccaacctggtgggcatcagcctggcggtggaagccgggcgcgcgtgctac
atcccgctcggccacacctatccgggcgcgccggcgcagttgccgctcgccgacacgctg
gatgcattgcgtccgctgttcgcggacgcgaacaggcgcaagatcgggcagcacggcaag
tacgacctgcacgtcctgcgttgccacggcatggacgtgcacggttacgccgaggacacg
atgctggaaagcttcgtgtggaacgcgggcgcgagccgccacgacatggattcgctcgcc
aagcgctacctcggctacgacgcggtcaagtacgaagacgtcgcgggcaagggcgccaag
cagatcctgttctcgcaggtgtcgctggaagacggcacgcgctacgcggcggaagacgcc
gacatcaccctgcgcctgcattcggtgctgcgcccgaaggtggcgtcggaacccacgctc
gatcgcgtctatcgcgaaatcgaaatgccgctcgtgcccgtgctggagcgcgtggaagcc
aacggcgtgttggtcgacgtcgtggagctcaagcgccagtccgcggacctcggcaagcgc
atgctcgacgcgcagcagcgcgcgaccgaactcgccggccgcaccttcagcctggactcg
ccgaagcaggtgggccagttgctgttcgaggaattgaagctgcccgtgcaggtgaagacg
ccgagcggccagcccagcgtcaacgaagaagcgctggaggccatcgcggacatgcacgag
ctgccgcgcatcatcctggagtaccgcggcctggcgaagctgcgcagcacgtacaccgac
aagctgccggacatggtcaaccgcaacaccggccgcgtgcacaccagctaccaccaggcg
ggcgccgcgacgggccggttggcgtcctccgatcccaacctgcagaacatcccgatccgc
accgaggacggccgccgcatccgccgcgcattcatcgccccggcggggcgcagcatcgtg
gcgtgcgactactcgcagatcgagttgcggatcatggcgcacctgtcggaagacgagaac
ctgctgcgcgcattcacctccggcgccgacatccatcgcgcgaccgcggcggaagtgttc
ggcaagaccatcgaagaggtctccggcaacgagcgtcgcgccgcgaaggcgatcaatttc
ggcctgatgtacggtatgagcgcattcggtttagcgcgccaactcggcatcgggcgcggc
gaagcgcaggactacatcgccttgtatttctcgcgctatccgggcgtgcgcgatttcatg
gagcgcacgcggcaggaagcgcgcgagcgcggcttcgtcgaaacggtgttcgggcgccgg
ctgcacctggaaaacatcgcctcgcgcaaccagggcctgcgcgcgggcgccgaacgcgcg
gcgatcaacgcgccgatgcaggggactgcggcggatatcgtgaagcgggcgatgatcgag
atcgatcgctggctcgcgggcctcggcgggcgcgcgctgatgatcctgcaggtgcacgac
gaactcgtgttcgacgtggaggacggattcgtggacgatctggtcgatggcgcgaaggcg
cgcatggccgccgccgccgacttgcgcgtgcccctcgtggtcgatgcaggcaagggcgcc
aattgggatgaagcccactga
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integrated database retrieval system
