Lysobacter caseinilyticus: LYSCAS_13080
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Entry
LYSCAS_13080 CDS
T07541
Symbol
tetA
Name
(GenBank) tetracycline resistance MFS efflux pump
KO
K08151
MFS transporter, DHA1 family, tetracycline resistance protein
Organism
lcas
Lysobacter caseinilyticus
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcas02000
]
LYSCAS_13080 (tetA)
01504 Antimicrobial resistance genes [BR:
lcas01504
]
LYSCAS_13080 (tetA)
Transporters [BR:
lcas02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-1 (12 spanner) (DHA1) family [TC:
2.A.1.2
]
LYSCAS_13080 (tetA)
Antimicrobial resistance genes [BR:
lcas01504
]
Gene variants
Tetracycline resistance genes
Transporters
LYSCAS_13080 (tetA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_1_like
Sugar_tr
MFS_2
MFS_4
TRI12
Motif
Other DBs
NCBI-ProteinID:
BCT92284
LinkDB
All DBs
Position
1357713..1359005
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AA seq
430 aa
AA seq
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MTSDAPTGAHPGARKAATVFIFVTVLIDIMAFGLIIPVLPHLVQEMAGGDMVTAAKWVGI
FGVLFAAIQFVSSPVQGAMSDRFGRRPVILLSCLGLGVDFIFMALAQTLPWLLVGRVISA
IFAASFTTANAYIADVTEPSKRAQAFGMLGAAFGLGFIVGPIIGGTLSGIDIRLPFWAAA
GLALVNFCYGLFVLPESLPKARRSARIDWAHAHPFGSMKLLARYPAIWGMVAVVFLLNLA
HYVYPSVFVLFADAAYGWGPRTVGYVLGVVGVLSVIVNAVLVKRVVAKFGERRALLIGLS
CGVVGFAIYGLAPTGAVFLMGMPIMALWALAMPATQSMVTRLVGPEVQGRVQGALTSLAS
LAGIIAPAIYTSVFALFIGPHAPAKLPGAPFLLACALLASAGLVAWRFIRTHAELQVDGP
LPAPANPGEG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtgacttccgacgcccccaccggcgcccatcccggcgcgcgcaaggccgcgaccgtcttc
atcttcgtcaccgtcctgatcgacatcatggcgttcggcctgatcattcccgtgctgccg
cacctggtgcaggagatggccggcggcgacatggtgacggcggcgaaatgggtcggcatc
ttcggcgtgctgttcgccgccatccagttcgtcagctcgccggtgcagggcgcgatgtcc
gatcgcttcgggcgccggccggtgatcctgttgtcgtgcctgggcctgggcgtggacttc
atcttcatggccctggcgcaaacgctgccctggctgctggtggggcgcgtgatttccgcg
atcttcgcggccagcttcaccacggccaacgcctacatcgcggacgtcaccgagccgtcg
aagcgcgcgcaggcgttcggcatgctcggcgccgcattcggcctgggcttcatcgtcggc
ccgatcatcggcggcacgctcagtggcatcgacatccgcctgccgttctgggccgcggcg
ggactggcgctggtcaacttctgctatggcctgttcgtgctgcccgagtcgctgcccaag
gcgcgacgttccgcgcgcatcgactgggcgcacgcccatccgttcggttcgatgaagctg
ctggcgcgctatccggcgatctggggcatggtcgcggtggtgttcctgctcaacctcgcg
cactacgtgtatccgagcgtcttcgtgctgttcgccgatgccgcgtacggctggggcccc
cgcacggtgggttacgtgctcggcgtcgtcggcgtcctcagcgtgatcgtcaacgccgtg
ctggtgaagcgcgtcgtcgcgaagttcggcgaacgccgcgcgttgctgatcgggctgtcg
tgcggcgtggtcggcttcgcgatctacggactggcgcccacgggcgcggtgttcctgatg
ggcatgccgatcatggcgttgtgggcgctggcgatgccggcgacgcaatcgatggtgacg
cgcctggtggggcccgaagtccaggggcgcgtgcagggtgcgttgacgagcctggcgagc
ctggcgggcatcatcgcgccggcgatctacacctcggtgttcgcgctcttcatcggcccg
catgcgccggcgaagttgccgggtgcgccgttcctgctggcctgcgcgttgctggccagc
gcgggcctggtggcgtggcgcttcatccgcacgcacgccgaactgcaagtggacggtccg
ctgcccgcgcccgcgaatccaggcgaaggctga
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