Lysobacter caseinilyticus: LYSCAS_13170
Help
Entry
LYSCAS_13170 CDS
T07541
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lcas
Lysobacter caseinilyticus
Pathway
lcas03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LYSCAS_13170 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcas03400
]
LYSCAS_13170 (ung)
Enzymes [BR:
lcas01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LYSCAS_13170 (ung)
DNA repair and recombination proteins [BR:
lcas03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LYSCAS_13170 (ung)
Prokaryotic type
LYSCAS_13170 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BCT92293
LinkDB
All DBs
Position
complement(1365594..1366295)
Genome browser
AA seq
233 aa
AA seq
DB search
MTDAPSANTDRVRLEPGWKSRIGDYLLRDDMQALSAFLRERRAKGAQVFPPLPQVFAALD
ATPFDKVKVVILGQDPYHGFGQAHGLCFSVQPGTAIPPSLDNVFKELQRDLGIPRPAHGC
LTHWAEQGVLLLNAVLTVEEGKAGAHAGKGWECFTDRIVEVLANEREHLVFLLWGAYAQA
KGKVIDTGRHRVLKAPHPSPLSAHRGFIGCGHFSKTNEYLVRHGQAPIDWRLP
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgcaccgtccgcgaacaccgaccgcgttcgcctcgaaccgggctggaaatcg
cgcatcggcgattacctgttgcgcgacgacatgcaggcgctgtccgcgttcctgcgcgag
cgtcgggcgaagggcgcgcaggtgttcccgccgttgccgcaggtgttcgccgcgctggac
gccacgccgttcgacaaggtgaaagtggtgatcctcggccaggatccgtaccacggcttc
ggacaggcgcacggcttgtgtttctccgtgcagcccggcaccgcgatcccgccgtcgctc
gacaacgtgttcaaggaattgcagcgcgacctcggcatcccgcggcctgcgcacggctgc
ctcacgcactgggccgaacaaggcgtgctgctgctcaacgccgtgcttaccgtcgaagaa
ggcaaggccggcgcgcacgcggggaaaggctgggaatgcttcaccgaccgcatcgtggaa
gtgctcgccaacgaacgcgagcatctcgtgttcctgctgtggggcgcctatgcgcaggcg
aagggcaaggtgatcgacaccggccgccatcgcgtgctgaaggcgccgcatccttcgccg
ctgagtgcgcaccgcgggttcatcggatgcgggcacttctcgaagacgaacgaatacctg
gtgcggcacgggcaagcgccgatcgactggcgcctgccttga
DBGET
integrated database retrieval system
