Noviluteimonas caseinilytica: LYSCAS_20960
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Entry
LYSCAS_20960 CDS
T07541
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lcas
Noviluteimonas caseinilytica
Pathway
lcas03030
DNA replication
lcas03430
Mismatch repair
lcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LYSCAS_20960 (holA)
03430 Mismatch repair
LYSCAS_20960 (holA)
03440 Homologous recombination
LYSCAS_20960 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcas03032
]
LYSCAS_20960 (holA)
03400 DNA repair and recombination proteins [BR:
lcas03400
]
LYSCAS_20960 (holA)
Enzymes [BR:
lcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LYSCAS_20960 (holA)
DNA replication proteins [BR:
lcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LYSCAS_20960 (holA)
DNA repair and recombination proteins [BR:
lcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LYSCAS_20960 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
HP_1247_M
DNA_pol3_delt_C
DNA_pol3_delta_C
DUF6596
T3SS_needle_F
Motif
Other DBs
NCBI-ProteinID:
BCT93072
UniProt:
A0ABM7Q6W0
LinkDB
All DBs
Position
2184255..2185301
Genome browser
AA seq
348 aa
AA seq
DB search
MSELRPDRLAAQLAAEPLRPAYLVAGPEALVVLEAADAIRAAAREQGIGDREVFDIEGRD
PDWDSLSAAFNAPGLFATRRVVEVRMPTGKPGKEGAEVFTEFAANPPPDVVLLVTCADWS
RQHGGKWSEALGRIGHQVIAWPIKPHELPDWIERRLRARGLRADRDAVQALAERVEGNLL
AAAQEIDKLALLADGNTIDLARMQALVSDSARYDVFRLVDAAMNGEGAQVSRMLHGLRSE
GEAVPALLGMVCMELQRAAALSRVQARGGNLNAEFKAQRIWDSKQAAYTRALQRHDAARW
ERFAAEAGRVDRIAKGRPRWGQDPMDAWIALERVLLAVANPKAMRLLG
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaactccggccggaccggctcgcggcgcaactggcggccgagcccctgcggccc
gcgtacctcgtcgccgggcccgaagccctcgtcgtcctcgaagctgccgacgccatccgc
gccgccgcgcgcgagcagggcatcggcgatcgcgaagtgttcgacatcgaaggccgcgat
cccgactgggattcgttgtccgccgcgttcaatgcgccgggcctgttcgcgacgcgccgc
gtcgtcgaagtgcgcatgcccaccggcaaaccgggcaaggaaggcgcggaagtcttcacc
gaattcgcggccaatccgccgcccgacgtcgtgctgctggtcacctgcgccgactggagc
cgccagcacggcggcaagtggagcgaagcgctgggccgcatcggccaccaggtgatcgcc
tggccgatcaagccgcacgaattgcccgactggatcgaacgccgcctgcgcgcgcgcggc
ctgcgcgccgatcgcgacgcggtgcaggcgctggccgaacgcgtcgaaggcaacttgctc
gccgccgcgcaggaaatcgacaagctggcgttgctcgccgacggcaacacgatcgacctg
gcgcggatgcaggcgctggtgtcggattcggcgcgctacgacgtgttccgcctcgtcgat
gcagcgatgaacggcgagggcgcgcaggtgtcgcgcatgctgcacgggctgcggtccgaa
ggcgaagcggtgcccgccttgctcggcatggtgtgcatggaattgcagcgcgccgcggcg
ctctcgcgcgtgcaggcgcgcggcggcaacctcaacgcggagttcaaggcgcaacgcatc
tgggattcgaagcaggccgcgtacacgcgcgcgttgcagcggcatgacgccgcgcgctgg
gaacgcttcgccgccgaagccgggcgcgtggatcgcatcgcgaaggggcgcccgcgctgg
ggccaggatccgatggatgcgtggatcgcgctcgaacgcgtgctgcttgccgtcgccaat
cccaaagcgatgcggttgctgggctga
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