Noviluteimonas caseinilytica: LYSCAS_23860
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Entry
LYSCAS_23860 CDS
T07541
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
lcas
Noviluteimonas caseinilytica
Pathway
lcas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LYSCAS_23860 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcas03019
]
LYSCAS_23860 (pcnB)
Enzymes [BR:
lcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LYSCAS_23860 (pcnB)
Messenger RNA biogenesis [BR:
lcas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LYSCAS_23860 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BCT93362
LinkDB
All DBs
Position
2495409..2496737
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AA seq
442 aa
AA seq
DB search
MTLPSAQPILRTIPRDAHAISRKDISPNALRVLYRLREGGFGAFLVGGAVRDLLVGGHPK
DFDVATDATPEQVKALFRNCRLIGRRFRLAHVVYGREIIEVATFRANVDDGSGDREMHEG
GRLLRDNVYGTIEEDAIRRDFTANALYYAIEDFSVRDYTGGFEDVQARVMRLIGDPETRY
REDPVRMLRAVRLAAKLDFTIEPATAAPLPALAPLLRESAPARLFEEALKLFLSGHAVAS
FERLEHHGLLAAFLPETAQALASNRSGALRRMVIEGLRSTDARVANDEPVSPAFLFAVLL
WPAYCRDLMGLQASGVHAAEAQRRAADRVTLHLLNTIALPRRFSLPMQEIWLLQSRFNQR
QRKRVFRLLGHPRFRAAFDFLVLRQHASPEHAEDIAFWTDVQSQPGEAVAAQLEARAIEA
AEAEDAPRKRRRRRRRPEASGG
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcccagtgcgcaaccgatcctgcgcacgatcccgcgcgatgcacacgcgatc
tcgcgcaaggacatcagtccgaatgcgctgcgcgtcctctatcgcctgcgtgagggcggc
ttcggcgcgttcctcgtcggcggcgccgtgcgcgacctgctggtcggcggacatcccaag
gatttcgacgtcgccaccgacgccacgcccgagcaggtgaaggcgctgttccgcaattgc
cgcctgatcggccgccggttccgcctggcgcacgtcgtgtacggccgcgagatcatcgaa
gtggccaccttccgcgccaacgtcgacgacggcagcggcgatcgcgaaatgcacgaaggc
ggccgcctgctgcgcgacaacgtgtacggcacgatcgaggaagatgcgatccgccgcgac
ttcaccgccaacgcgctgtactacgcgatcgaggatttctcggtgcgcgactacaccggc
ggtttcgaggacgtgcaggcgcgcgtgatgcggctgatcggcgatccggaaacgcgttac
cgcgaagatcccgtgcgcatgctgcgcgccgtgcgcctggccgcgaagctcgacttcacg
atcgaacccgccaccgccgcgccgctgcccgcgctcgcgccgctgctgcgcgaatccgcg
ccggcgcgcctgttcgaagaagccttgaagctcttcctctccggccatgcggtcgcgagt
ttcgaacgcctcgaacaccacggcctgctcgccgcgttcctgccggagaccgcgcaggcg
ctcgccagcaatcgcagcggtgccttgcgccgcatggtgatcgaaggcctgcgcagcacc
gatgcgcgcgtggccaacgacgaacccgtctcgcccgcgttcctgttcgccgtgctgctg
tggcccgcgtattgccgcgatttgatgggcctgcaggcctcgggcgtgcacgcggccgaa
gcgcaacgccgcgccgccgatcgcgtcacgctgcacctgctcaacacgattgcgttgccg
cgccgcttctcgctgccgatgcaggaaatctggctgctgcagtcgcgcttcaaccagcgc
cagcgcaagcgcgtgttccgcctgctgggccatccgcgtttccgcgccgcgttcgatttc
ctcgtgctgcgccagcacgcctcgcccgagcacgccgaagacatcgcgttctggaccgac
gtgcagtcgcaaccgggcgaagcggtggccgcgcagctcgaagcgcgcgcgatcgaagcc
gccgaagccgaagacgcaccgcgcaagcgccgtcgtcgtcgtcgccggcccgaagcgagc
ggcggataa
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