Noviluteimonas caseinilytica: LYSCAS_24850
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Entry
LYSCAS_24850 CDS
T07541
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcas03016
]
LYSCAS_24850 (truB)
Enzymes [BR:
lcas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LYSCAS_24850 (truB)
Transfer RNA biogenesis [BR:
lcas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LYSCAS_24850 (truB)
Prokaryotic type
LYSCAS_24850 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BCT93461
LinkDB
All DBs
Position
2601079..2602086
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AA seq
335 aa
AA seq
DB search
MDPSPEPRVPSPGKRTRFRKLDGILLLDKPRGLSSNQALQRVRHLFRAEKGGHTGSLDPL
ATGLLPVCFGEATKIAGGLLGARKGYETVARLGIVTDTDDAEGAPLRERPVPALTIPVID
AALATLTGAQMQRPPIYSALKRGGEPMYARARRGEVLEVEPRPVDVHAFELISAADLLHG
DEPLLRLHVECGSGTYVRSLVRDLGELLGCGAHVAELRRLWVDPFRDPRMWTLEALQELA
DRGERMLDACLLPIETGMTAWPHLRVSAAQAMRLARGQSVAGASSTPGRVALYDDAGRAL
GLGQVDETGCLRPQRLFTWAAALGQPAPTVAKPLS
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ttggacccgagccccgagccccgagtcccgagccccggcaagcgcacgcgcttccgcaag
ctcgacggcatcctgctcctcgacaaaccccgcggcctgagttccaaccaggcgttgcag
cgcgtgcgccatctgttccgcgcggagaagggcggccacaccggcagcctcgatccgctc
gccaccggcctgctgccggtgtgcttcggcgaagcgacgaagatcgccggcggcctgctc
ggcgcgcgcaaggggtacgaaaccgtcgcgcgcctgggcatcgtcaccgacaccgatgac
gccgaaggcgcgccgctgcgcgaacggccggtgcccgccctcacgattcccgtcatcgac
gccgcgttggcgacgctcactggcgcgcagatgcagcggccgccgatctattccgcgctc
aagcgcggcggcgaacccatgtatgcccgcgcgcgccgcggcgaagtgctcgaagtcgag
ccacggccggtcgacgtccacgccttcgaactgatctccgccgccgacctgctgcacggc
gacgaaccgctgctgcgcctgcacgtggaatgcggctcgggcacctacgtgcgcagcctc
gtgcgggacctgggcgaactgctggggtgcggcgcgcacgtggccgagctgcgccgcctg
tgggtcgatcccttccgcgatccgcgcatgtggacgctggaagccctgcaggaactcgcc
gaccgcggcgaacgcatgctcgacgcctgcctgctcccgatcgaaaccggcatgaccgcg
tggccgcacctgcgcgtctcggccgcgcaggccatgcgcctggcgcgcggccagtcggtg
gccggcgcctcgtccacgcccggccgcgtcgcgctgtacgacgacgcgggccgcgcgctc
ggcctgggccaggtggatgaaaccggctgcctgcgcccgcaacgcctgttcacgtgggcg
gccgcactgggccagcccgctccgaccgtcgctaaacccttgtcctga
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