Noviluteimonas caseinilytica: LYSCAS_28690
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Entry
LYSCAS_28690 CDS
T07541
Symbol
rpfB
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lcas
Noviluteimonas caseinilytica
Pathway
lcas00061
Fatty acid biosynthesis
lcas00071
Fatty acid degradation
lcas01100
Metabolic pathways
lcas01212
Fatty acid metabolism
lcas02024
Quorum sensing
lcas04146
Peroxisome
Module
lcas_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
LYSCAS_28690 (rpfB)
00071 Fatty acid degradation
LYSCAS_28690 (rpfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
LYSCAS_28690 (rpfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
LYSCAS_28690 (rpfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lcas01004
]
LYSCAS_28690 (rpfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lcas04147
]
LYSCAS_28690 (rpfB)
Enzymes [BR:
lcas01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
LYSCAS_28690 (rpfB)
Lipid biosynthesis proteins [BR:
lcas01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
LYSCAS_28690 (rpfB)
Exosome [BR:
lcas04147
]
Exosomal proteins
Exosomal proteins of breast milk
LYSCAS_28690 (rpfB)
Exosomal proteins of breast cancer cells
LYSCAS_28690 (rpfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
DUF4235
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
BCT93845
UniProt:
A0ABM7Q8S1
LinkDB
All DBs
Position
2959789..2961468
Genome browser
AA seq
559 aa
AA seq
DB search
MQVERPWLSSYPQGVPAEIDVDEFPSIVSVLQSSLEKFRDRPAFANLGKVITYAEIDRLS
QQFAAYLLGELKLKKGDRVAIMMPNCLQYPIATFGVLRAGLTVVNTNPMYTARELKHQLE
DSGASVLVVLDNFGAVVQEVLAETQVRQVVTTGLGDMLGFPKGPLVNFVLRHVKKMVPDY
SLPGAIRFRDALTLGQMHPLPQVAIDAEDLAFLQYTGGTTGVAKGAMLTHRNLVANMQQA
AAWIGTNVRYGEELIITALPLYHIFALTANGLVFMKFGGLNYLITNPRDMPAFVKELKKV
PFTAITGVNTLFNGLLNTPGFDSIDFSRLHLTLGGGMAVQRAVAERWKKITGVTLVEAYG
LTETSPAACINPMDLAEYNGSIGLPVPSTDACLKDESGNRVAQGEVGELCIKGPQVMKGY
WQRPDETANVMDAEGWLHTGDMAKMDEKGFFYIVDRKKDMILVSGFNVYPNEVEDVIAML
PGVLEVGAVGVPDEKSGEAVKVVIVRKDPNLTAEEVKAHAKENLTGYKQPKYVEFRTELP
KTNVGKILRRELRGPTPAA
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttgaacgtccgtggctgtccagttatccgcagggcgtgcccgcggagatcgat
gtcgacgaattcccgtcgatcgtctccgtgctgcagtcctcgctggagaaattccgcgac
cggcccgcgttcgccaacctcggcaaggtgatcacctacgccgagatcgatcgcctcagc
cagcagttcgccgcctacctgctgggcgagctcaagctcaagaagggcgatcgcgtcgcg
atcatgatgcccaactgcctgcagtaccccatcgccaccttcggcgtgctgcgcgcgggc
ctcaccgtcgtcaacaccaatccgatgtacacggcacgcgagctcaagcaccagcttgaa
gactccggcgccagcgtgctggtcgtgctcgacaacttcggcgccgtcgtccaggaagtg
cttgcggaaacgcaggtgcgccaggtggtcaccacgggcctgggcgacatgctcggtttc
ccgaagggcccgctggtcaatttcgtgctgcgccacgtcaagaagatggtgccggactat
tcgctgccgggcgccatccgcttccgcgatgcgctcaccctcggccagatgcatccgctg
ccgcaggtggccatcgatgccgaagacctcgccttcctgcagtacaccggcggcaccacc
ggcgttgcgaagggcgcgatgctcacgcaccgcaacctcgtggccaacatgcagcaggcc
gcggcgtggatcggcaccaacgtgcgctatggcgaagaattgatcatcaccgcgttgccg
ctgtaccacatcttcgcgttgacggcgaacggcctggtcttcatgaagttcggcggcctc
aattacctgatcaccaatccgcgcgacatgcccgcgttcgtgaaggaactcaagaaagtc
cccttcaccgccatcaccggcgtcaacacgctgttcaacgggttgctcaacacgccgggc
ttcgactcgatcgacttctcgcgcctgcacctcaccctcggcggcggcatggccgtgcag
cgcgcggtggccgagcgctggaagaagatcaccggcgtcaccctggtcgaggcctacggc
ctgaccgaaacctcgcccgccgcgtgcatcaacccgatggacctggccgagtacaacggc
tcgatcggcctgcccgtcccgtccaccgatgcgtgcctgaaggacgaatccggcaaccgc
gtcgcccagggcgaagtcggcgagctgtgcatcaagggcccgcaggtcatgaagggctac
tggcagcggccggacgaaacggccaacgtcatggacgccgaaggctggctgcacaccggc
gacatggcgaagatggacgagaagggtttcttctacatcgtggaccggaagaaggacatg
atcctggtgtccggcttcaatgtttatcccaacgaagtggaagacgtgatcgcgatgctt
cccggggtcctggaagtcggcgcggtcggcgtgccggacgagaagtccggcgaggcggtc
aaggtggtcatcgtccgcaaggaccccaacctcaccgccgaagaggtcaaggcgcacgcc
aaggaaaacctcaccggctacaagcagccgaagtacgtggagttccgcaccgagctgccg
aagaccaacgtgggcaagatcctgcgtcgcgaactgcgcggacccacgcccgcggcctga
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