Noviluteimonas caseinilytica: LYSCAS_30680
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Entry
LYSCAS_30680 CDS
T07541
Symbol
rluB
Name
(GenBank) ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lcas
Noviluteimonas caseinilytica
Brite
KEGG Orthology (KO) [BR:
lcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcas03009
]
LYSCAS_30680 (rluB)
Enzymes [BR:
lcas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LYSCAS_30680 (rluB)
Ribosome biogenesis [BR:
lcas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LYSCAS_30680 (rluB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BCT94044
LinkDB
All DBs
Position
3186091..3187818
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AA seq
575 aa
AA seq
DB search
MSEQDRPRKLSLKRGATETSADAPRLEERLHKVLAQAGLGSRRALEQRIADGLIRVNGNV
AQVGMSVTGGDKIEIDGRTFVASALTEPARVLIYNKPEGEVTTREDPEGRPTIFESLPAL
KGARWIAIGRLDINTTGLLVLTTDGELANAMMHPSFEVEREYVCRVRAPEGEDTVPDKLV
DRLQRGVLLDDGPAQFNEIERLKGNEDGSHDWFRVLLKEGRNREVRRLWESQGCQVSRLK
RIRYGDVSLPQPLLRGQSQELAPDKVAALRAKVGLEEGAPSSLTLMPVIGQRKAAKSTLH
FGGAKGGGYVGGHNTADEGRELRRFDHVRDDRRPGRGGKKPHGGLTVSGEAAANAGNKAF
KPKGPRQAGQRMRPGESRDAGAPSEFRTWYVPEGVATGPTGHRNPDGARGPRKPYGNKPG
GGAGGPRPGGGGPRPGGGGPRPAGAGGPRPYGNGGAANRGDARGPRGPGGPGGGGGGHRP
YGHPGNAPSFPSDHANPGGFNPYADKPRGPRPAGPGGPRPGGARPGGPRPGGARPGGAPG
GQRPGGRPGGPRPAGPRPGGPRGGGRPGGGRHSGG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcaagaccgcccgcgcaagctttcgctgaagcgcggtgcaaccgaaacgtcc
gccgacgcgccccgcctcgaggagcgcctgcacaaggtgctcgcgcaggccggcctcggc
tcccgccgcgcgctcgagcagcgcatcgccgacggcctgatccgcgtcaacggcaacgtc
gcccaggtcggcatgagcgtcaccggcggcgacaagatcgaaatcgacggccgcacgttc
gtcgccagcgcgctgaccgaaccggcgcgcgtgctgatctacaacaagcccgaaggcgaa
gtcaccacgcgcgaagatcccgaaggccgcccgaccatcttcgaatccctgcccgccctg
aagggtgcgcgctggatcgcgatcggccgcctcgacatcaacaccaccggcctgctggtg
ctcaccaccgatggcgaactcgccaacgcgatgatgcatccctccttcgaagtcgaacgc
gagtacgtgtgccgcgtgcgtgcgcccgaaggcgaagacaccgtgccggacaagctggtc
gaccgcctgcagcgcggcgtgctgctcgacgacggcccggcgcagttcaacgaaatcgaa
cgcctgaagggcaacgaagacggatcgcacgactggttccgcgtgctcctcaaggaaggc
cgcaaccgcgaagtgcgccgcctgtgggaatcgcagggctgccaggtctcgcgcctgaag
cgcatccgctacggcgacgtgtcgctgccgcagccgctgctgcgcggccagtcgcaggaa
ctcgcgcccgacaaggtcgccgcgctgcgcgcgaaggtcggcctcgaagaaggcgcgccc
tcctcgctcacgctgatgccggtgatcggccagcgcaaggctgccaagtcgacgctgcat
ttcggcggcgcgaagggcggcggttacgtcggcggccacaacacggcagacgaaggccgc
gaactgcgtcgcttcgaccacgtgcgcgacgatcgtcgcccgggtcgcggcggcaagaag
ccgcatggcggtttgacggtcagcggcgaagccgcggcgaatgccggcaacaaggcgttc
aagccgaagggtccgcgccaggccggccagcgcatgcgtccgggtgaatcgcgcgatgcg
ggtgcgccgagcgaattccgcacgtggtacgtgccggaaggcgtcgccacgggtccgacc
ggccatcgcaatcccgatggtgcgcgcggtccgcgcaagccctacggcaacaagccgggc
ggcggcgcgggtggcccgcgtccggggggtggtggtccgcgtccggggggcggcggtccg
cgtccggccggcgccggtggtccgcgtccgtacggcaacggcggtgcagcgaatcgcggt
gatgcgcgtggtccgcgcggtcccgggggtccgggcggcggcggtggcgggcatcgtccg
tacgggcatcccggcaacgcgccgagcttcccgtccgatcacgcgaatcccggcggtttc
aatccgtacgccgacaagccgcgtggtccgcgtccggcgggtccgggcggtccgcgtcct
ggcggcgcacgccccggcggtccgcgtccgggtggcgcacgtcccggcggtgcgcctggc
ggccagcgtccgggcggtcgtcccggtggtccgcgtcccgcgggtccgcgtccgggcggt
ccgcgcggtggcgggcgtcccggtggcggtcgccattcgggcggctga
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