Lemur catta (Ring-tailed lemur): 123620239
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Entry
123620239 CDS
T08326
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04082
Neuroactive ligand signaling
lcat04721
Synaptic vesicle cycle
lcat04726
Serotonergic synapse
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
123620239 (SLC6A4)
09150 Organismal Systems
09156 Nervous system
04726 Serotonergic synapse
123620239 (SLC6A4)
04721 Synaptic vesicle cycle
123620239 (SLC6A4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123620239 (SLC6A4)
Transporters [BR:
lcat02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
123620239 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
Motif
Other DBs
NCBI-GeneID:
123620239
NCBI-ProteinID:
XP_045381245
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Position
15:18061689..18086911
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AA seq
630 aa
AA seq
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METTPLNSQKEVSACKDGEDCQENGVLQKGVPAPGDKAESGQISNGYSAVPSPGAGDDMQ
HSIPAATTTLVAEVHQGERETWGKKVDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLP
YTIMAIFGGIPLFYMELALGQYHRNGCISIWRKICPIFKGIGYTICIIAFYIASYYNTIM
AWALYYLFSSFTDQLPWTSCKNSWNTGNCTNYFSEGNITWTLHSTSPAEEFYTRHVLQIH
RSKGLQDLGGISWQLALCIMLIFTIIYFSIWKGVKTSGKVVWVTATFPYIILSVLLVRGA
TLPGAWRGVLFYLKPNWQKLLETGVWVDAAAQIFFSLGPGFGVLLAFASYNKFHNNCYQD
ALVTSVVNCMTSFVSGFVIFTVLGYMAEMRNEDVSEVAKDAGPSLLFITYAEAIANMPAS
TFFAIIFFLMLITLGLDSTFAGLEGVITAVLDEFPHIWAKRREWFVLAVVITCFFGSLIT
LTFGGAYVVKLLEEYATGPAVLTVVLIEAVAVSWFYGITQFCSDVKEMLGFSPGWFWRIC
WVAISPVFLLFILCSFLMSPPQLRLFHYNYPHWTVILGYCIGTSSFICIPTYITYRLIIT
PGTFKERIIKSITPETPTEIPCGDIRLNVV
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccacgcccttaaattctcagaaggaggtctcagcctgtaaggacggagaagat
tgtcaggaaaacggagttctacagaagggtgtccctgccccaggagataaagcagagtcc
ggccaaatatccaatgggtactcagcggttccgagccctggtgcaggggatgacatgcag
cactccatcccggctgccaccaccaccctagtggctgaggtccaccaaggagagcgggag
acctggggcaaaaaggtggatttcctcctttcagtcattggctacgctgtggacctgggc
aacgtctggcgctttccctacatatgttaccagaacggagggggggcgttcctcctcccc
tacaccatcatggccatttttggggggatcccgctcttttacatggagcttgcgctgggg
cagtaccatcgaaatggatgcatttcaatttggaggaaaatctgcccaatttttaaaggg
atcggctataccatttgcatcattgccttttacattgcctcctactacaacaccatcatg
gcctgggcactgtactacctcttctcctccttcacggaccagctgccctggaccagctgc
aagaactcctggaacactggcaactgcaccaactacttctctgagggcaacatcacctgg
acactccattccacgtcccctgctgaagagttttacacgcgccatgtcctgcagatccac
cggtccaagggactccaggacctggggggcatcagctggcagcttgccctctgcatcatg
ctgatcttcactattatctacttcagcatctggaaaggtgtcaaaacatctggcaaggtg
gtgtgggtgacagccaccttcccttacatcatcctttctgtcctgctggtgaggggggcc
accctaccgggagcctggaggggtgttctcttctacttgaaacccaactggcagaaactc
ctggagacaggggtatgggtggacgctgctgctcagatcttcttctctcttggtccgggc
tttggggtcctactggcttttgctagctacaacaaattccacaacaactgttaccaagat
gccctggtgaccagtgtggtgaactgcatgacaagcttcgtttcgggatttgtcatcttc
acggtgctggggtacatggctgagatgaggaacgaagatgtgtctgaggtggccaaagat
gcaggccccagcctcctcttcatcacatatgcggaagctatagccaacatgccagcatcc
acgttctttgccatcatcttcttcctgatgttaatcacactgggcttggacagcacattt
gcaggcttagagggcgtgatcacggctgtgttggatgaattcccacatatctgggccaaa
cgccgggagtggtttgtactcgctgtggtcattacctgcttcttcggatccctgatcacc
ctgacttttggcggggcctacgtggtgaagctgctggaggagtatgccacagggcctgcc
gtgcttactgtcgtacttatagaagccgttgctgtgtcttggttctatggcatcactcag
ttctgcagtgacgtgaaggaaatgcttggcttcagccctggatggttttggaggatctgc
tgggtagccatcagccctgtgtttctcctgttcatcctttgcagttttttgatgagccca
ccacagctacgacttttccattacaattatccccactggactgtcatcctggggtactgc
ataggaacttcatctttcatctgtatccccacatacataacttatcggctgatcatcact
ccagggacatttaaggagcgcattatcaaaagtatcactccagaaacaccaacagaaatt
ccgtgtggggacatccgcttgaatgttgtgtaa
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