Lemur catta (Ring-tailed lemur): 123620501
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Entry
123620501 CDS
T08326
Symbol
EIF4A3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03013
Nucleocytoplasmic transport
lcat03015
mRNA surveillance pathway
lcat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123620501 (EIF4A3)
09122 Translation
03013 Nucleocytoplasmic transport
123620501 (EIF4A3)
03015 mRNA surveillance pathway
123620501 (EIF4A3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123620501 (EIF4A3)
03041 Spliceosome [BR:
lcat03041
]
123620501 (EIF4A3)
03009 Ribosome biogenesis [BR:
lcat03009
]
123620501 (EIF4A3)
03012 Translation factors [BR:
lcat03012
]
123620501 (EIF4A3)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123620501 (EIF4A3)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
123620501 (EIF4A3)
mRNA cycle factors
Stress granule specific factors
123620501 (EIF4A3)
Spliceosome [BR:
lcat03041
]
Complex C
Other components
EJC/TREX
123620501 (EIF4A3)
Ribosome biogenesis [BR:
lcat03009
]
Eukaryotic type
90S particles
Helicases
123620501 (EIF4A3)
Translation factors [BR:
lcat03012
]
Eukaryotic type
Initiation factors
eIF-4
123620501 (EIF4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
123620501
NCBI-ProteinID:
XP_045381735
LinkDB
All DBs
Position
15:complement(55493390..55507273)
Genome browser
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacctcgggctcggcgcgcaagcggctgctcaaggag
gaagacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacccccacgttc
gacactatgggcctgcgggaggacctgctacgcggcatctacgcctacggttttgaaaaa
ccatcagcaatccaacagcgagccatcaagcagataattaaaggaagagacgtcatcgcg
cagtctcagtctggcacaggcaaaacagccaccttcagtatttcagtgcttcagtgtttg
gatattcaggttcgtgaaacccaggctctgatcttggcccccacgcgagagctggctgtg
cagatccagaagggcctgctcgctctcggcgactacatgaacgtccagtgccatgcctgc
atcgggggcaccaacgtgggcgaggacatcaggaaactggactatgggcagcatgttgtc
gcaggcacaccagggcgtgtctttgatatgattcgtcgaagaagtttaaggacacgagct
atcaagatgttggttttggatgaggctgatgaaatgttgaataaaggtttcaaagagcag
atttatgacgtgtacaggtacttgcctccggccacgcaggtggtcctcatcagtgccacg
ctgccccacgaaatcctggagatgaccaacaagttcatgacggacccaatccgcatcctg
gtgaaacgtgatgaactgaccctggaaggcatcaaacagttttttgtggcagtggagaga
gaagagtggaagtttgacaccctgtgtgatctctacgacacgctgaccatcacgcaggcg
gtcatcttctgcaacaccaagaggaaggttgactggctgacagagaagatgagagaagcc
aatttcactgtgtcctcgatgcacggggacatgccgcagaaggagcgcgagtccatcatg
aaggagttccggtccggcgccagccgagtgctcatttccacagacgtctgggccaggggc
ttggatgtccctcaggtgtccctcatcattaactacgacctgcccaacaacagagagttg
tacatacacagaattgggagatcaggtcgatatggccgaaagggcgtggccatcaatttt
gtcaagaacgacgacatccgcatcctccgcgacatcgagcagtactattccactcagatc
gacgagatgcccatgaacgttgctgatctgatctga
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