Lemur catta (Ring-tailed lemur): 123620535
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Entry
123620535 CDS
T08326
Symbol
DDX5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03040
Spliceosome
lcat05202
Transcriptional misregulation in cancer
lcat05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123620535 (DDX5)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
123620535 (DDX5)
05205 Proteoglycans in cancer
123620535 (DDX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcat03041
]
123620535 (DDX5)
03009 Ribosome biogenesis [BR:
lcat03009
]
123620535 (DDX5)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123620535 (DDX5)
Spliceosome [BR:
lcat03041
]
Complex A
U1 snRNP components
U1 related factors
123620535 (DDX5)
Complex B
123620535 (DDX5)
Ribosome biogenesis [BR:
lcat03009
]
Eukaryotic type
Pre-60S particles
Helicases
123620535 (DDX5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
Cas3-like_C_2
ERCC3_RAD25_C
BNIP2
Motif
Other DBs
NCBI-GeneID:
123620535
NCBI-ProteinID:
XP_045381792
LinkDB
All DBs
Position
15:complement(44620698..44627792)
Genome browser
AA seq
614 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSTANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVPNMHNGMNQQAYAYPATAA
APMIGYPMPTGYSQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggttattcgagtgaccgagaccgcggccgggatcgagggtttggtgcacctcgg
tttggaggaagtagggcagggcccctatctggaaagaagtttggaaaccctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcaa
gagcaccctgatttggctaggcgcacagcacaagaggtggagacatacagaagaagcaag
gaaattacagttagaggtcacaattgcccaaagccagttctgaatttttatgaagcaaac
ttccctgcaaatgtcatggatgtgattgcaagacagaactttactgaacccactgctatt
caagctcagggatggccggttgctctaagtggattggatatggttggagtagcacaaact
ggatctgggaaaacattgtcttatttgctgcctgccattgtccacatcaatcatcagcca
ttcctagagagaggcgatgggcctatttgcttggtgctggcaccaactcgggaactggcc
caacaagtgcagcaagtagctgctgaatactgtagagcatgtcgtttgaaatcaacttgc
atctatggtggtgctcctaagggaccacaaatacgtgatttggaaagaggtgtagaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgaga
agaactacctaccttgtccttgatgaagcagatagaatgcttgatatgggctttgagccc
cagataaggaagattgtggatcagataagacctgataggcaaaccctaatgtggagtgcg
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactacattcatata
aacattggtgcactagaactaagtgcaaaccacaacattcttcagattgtggatgtatgt
catgatgtagaaaaagatgaaaaacttattcgtctaatggaagagatcatgagtgagaag
gaaaataaaaccattgtttttgttgaaaccaagagaagatgtgatgagcttaccagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggaacgt
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctcccgagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtaagcgaccttatctctgttctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgtcgggacagatactctgcgggc
aaaaggggtggatttaatacctttagagacagggagaattatgacagaggttattctagc
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtactgcaaattac
accaatgggagctttgggagtaattttgtgtctgctggtatacagaccagttttaggact
ggtaatccaacagggacttaccagaatggttatgatagcactcagcagtatggaagtaat
gttcccaatatgcacaatggtatgaaccaacaggcatatgcatatcctgctactgctgcc
gcacctatgattggttatccaatgccaactggatattctcaataa
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