Lemur catta (Ring-tailed lemur): 123620596
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Entry
123620596 CDS
T08326
Symbol
SMARCD2
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03082
ATP-dependent chromatin remodeling
lcat04714
Thermogenesis
lcat05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123620596 (SMARCD2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
123620596 (SMARCD2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
123620596 (SMARCD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123620596 (SMARCD2)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123620596 (SMARCD2)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
123620596 (SMARCD2)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
123620596 (SMARCD2)
PBAF complex
123620596 (SMARCD2)
GBAF(ncBAF) complex
123620596 (SMARCD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
123620596
NCBI-ProteinID:
XP_045381940
LinkDB
All DBs
Position
15:complement(44125878..44135990)
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AA seq
531 aa
AA seq
DB search
MSGRGAGGFPLPPLSPGGGAVAAALGGPPPPAGPGMMPGPALRGPGPAGGVGGPGAAAFR
PMGPAGPAAQYQRPGMSPGSRMPMAGLQVGPPAGSPFGTAAPLRPGMPPTMMDPFRKRLL
VPQAQPPMPTQRRGLKRRKMADKVLPQRIRELVPESQAYMDLLAFERKLDQTIARKRMEI
QEAIKKPLTQKRKLRIYISNTFSPSKADGDSAGTTGTPGGTPAGDKVASWELRVEGKLLD
DPSKQKRKFSSFFKSLVIELDKELYGPDNHLVEWHRMPTTQETDGFQVKRPGDLNVKCTL
LLMLDHQPPQYKLDPRLARLLGVHTQTRAAIMQALWLYIKHNQLQDGHEREYINCNRYFR
QIFSCGRLRFSEIPMKLAGLLQHPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKAQM
SNFLASTTNQQEIASLDVKIHETIESINQLKTQRDFMLSFSTDPQDFIQEWLRSQRRDLK
IIADVIGNPEEERRAAFYHQPWAQEAVGRHIFAKVQQRRQELEQVLGIRLT
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcgaggcgcgggcgggttcccgctgcccccgctgagccctggcggcggcgcc
gttgccgcggccctgggagggccgcctcccccagcaggaccaggcatgatgcctggaccg
gcgctccggggaccgggaccggctggaggcgtgggcggcccgggggccgccgccttccgc
cccatgggccccgcgggccccgcggcgcagtaccagcggcctggcatgtcaccagggagc
cggatgcccatggctggcttgcaggtgggaccccctgctggctccccgtttggcactgct
gctccacttcgacctggcatgccacccaccatgatggatccattccgaaaacgcctgctt
gtgccccaggcccagcccccgatgcccacccagcgccgggggttaaagaggaggaagatg
gcagataaggttctacctcagcgaattcgggagcttgtcccagagtctcaggcatacatg
gatctcttggcttttgagcggaagctggaccagaccattgctcgcaagcggatggagatc
caggaggccatcaaaaagcctctgacgcaaaagcgaaaacttcggatctacatttccaat
acgttcagtcccagcaaggcagacggcgatagtgcaggaactacagggacccctggggga
accccagcaggggacaaggtggcttcctgggaactccgagtggaaggaaaactgctggat
gatcctagcaaacagaagaggaagttttcttcattctttaagagcctcgtcattgagctg
gacaaggaactgtacgggcctgacaatcacctggtggagtggcaccggatgcccaccacc
caggagacagatggcttccaggtaaaacggcctggagacctcaacgtcaagtgcaccctc
ctgctcatgctggatcatcagccaccccagtacaaactggacccccgactggcgaggctg
ctgggagtgcacacacagacacgggccgccatcatgcaggccctgtggctttacatcaaa
cacaaccagctgcaagatgggcacgagcgagagtacatcaattgcaaccgttacttccgc
cagatctttagttgtggccgactccgtttctccgagattcccatgaagctggctgggttg
ctgcagcatccagaccccattgtcatcaaccatgtcattagtgtggaccctaatgaccag
aagaaaacagcctgttatgacattgatgtggaggtcgacgacccactaaaggcccagatg
agcaattttctggcctctaccaccaatcagcaggagattgcctcccttgatgtcaagatc
catgagaccattgagtccatcaaccagctgaagacccagagggatttcatgctcagcttt
agcactgacccccaggacttcatccaggaatggctccgttcccagcgccgagacctcaag
atcatcgctgatgtgattggaaatcctgaggaggagagacgagctgctttctaccaccag
ccctgggcccaggaagcagtggggaggcatatctttgccaaggtgcagcagcgaaggcag
gaactggaacaggtgctgggaattcgcctgacctaa
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