Lemur catta (Ring-tailed lemur): 123620681
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Entry
123620681 CDS
T08326
Symbol
RPA1
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03030
DNA replication
lcat03420
Nucleotide excision repair
lcat03430
Mismatch repair
lcat03440
Homologous recombination
lcat03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
123620681 (RPA1)
03420 Nucleotide excision repair
123620681 (RPA1)
03430 Mismatch repair
123620681 (RPA1)
03440 Homologous recombination
123620681 (RPA1)
03460 Fanconi anemia pathway
123620681 (RPA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123620681 (RPA1)
03032 DNA replication proteins [BR:
lcat03032
]
123620681 (RPA1)
03400 DNA repair and recombination proteins [BR:
lcat03400
]
123620681 (RPA1)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123620681 (RPA1)
DNA replication proteins [BR:
lcat03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
123620681 (RPA1)
DNA repair and recombination proteins [BR:
lcat03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
123620681 (RPA1)
MMR (mismatch excision repair)
123620681 (RPA1)
DSBR (double strand breaks repair)
HR (homologous recombination)
123620681 (RPA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
123620681
NCBI-ProteinID:
XP_045382091
LinkDB
All DBs
Position
15:complement(16430644..16488520)
Genome browser
AA seq
631 aa
AA seq
DB search
MVGQLSEGAIAAIMQQGDTTIKPILQVINIRPITTGNSPPRYRLLMSDGLNTLSSFMLAT
QLNPLIEQEQLSSNCICQINRFIVNTLKDGRRVVILMELKVLKSAEEVGLKIGNPVPYNE
VSMESVVISPLVPDIGHGQQQVVPSPVSAASPATNKPQPQNGSLGMGSTVSKAYGVSKTF
GKAGGTSLSNTSGGTQAKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLE
LVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKGTLKIANKQFSAVKNDYEMTFSNETT
VMPCEDDRHLPTVQFDFTGIGDLESKPKDSLVDIIGICKNYEDATKIIVKSNNREVAKRN
IYLMDTSGKVVTATLWGEDADKFDGSRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDI
PEAYKLRGWFDSEGHDLDGVSISDLKSGGVGGSNTNWKTLYDVKAENLGQGDKADYFSSV
ATVVFLRKENSMYQACPTQDCNKKVIDQQNGLYRCEKCNREFPNFKYRMILSVNIADFQD
NQWVTCFQESAEAILGQNTAYLGELKDKNEQAYEEVFQNANFRSFTFKIRVKLENYNDES
RIKATVMDVKPVDYREYGRRLITNIRRNSVM
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggtcggccaactgagcgagggggccattgcggccataatgcaacaaggagatacaacc
ataaaacccatcctccaagtcattaacattcgtcccattaccacagggaatagtccaccc
cgctatcgactacttatgagtgatggattgaacactttatcctctttcatgttggcaaca
cagttgaaccctcttattgagcaagaacaattgtccagcaactgtatttgccagattaac
cgatttattgttaacactctgaaagatggaaggagagtagttattttaatggaattaaaa
gttttgaaatcagctgaagaagttggattaaagattggcaatccagtgccctataacgaa
gtgtctatggaatctgtggtgatctcacctctcgttcccgatattggacatgggcagcag
caagtagttccgtctccagtctcagcagccagtccagcaaccaacaagccccagccacag
aatgggagcttgggaatgggttccactgtttccaaggcttatggtgtctcaaagacattt
ggaaaagctggaggtaccagtctctcgaacacttctgggggcacacaggccaaggtggtg
cccattgccagcctcactccataccagtccaagtggactatttgtgctcgtgtaaccaac
aaaagtcagatccgtacctggagcaattcccgaggagaagggaagcttttctctctagaa
ctagttgatgaaagtggtgaaatcagagctacagctttcaatgagcaagtggacaagttc
tttccccttattgaagtgaacaaggtgtattatttctcaaaaggtaccctgaagattgct
aacaaacaattctcagctgttaaaaatgactatgagatgaccttcagtaacgagaccact
gtcatgccctgtgaagatgatcgtcatttacctacagttcagtttgatttcacagggatt
ggtgacctagagagcaagcccaaagactcacttgtagacataatcgggatctgcaagaac
tatgaagatgccactaaaatcatagtgaagtctaacaacagagaggttgctaagagaaat
atctatctgatggacacttcagggaaagtggtgactgctactctgtggggggaagatgct
gataaatttgatggctctagacagcctgtgatggctatcaaaggagcccgagtttctgat
tttggtggacggagcctgtctgtactgtcttcaagcactatcattgtgaatcctgacatc
ccagaggcctataaacttcgtggatggttcgactcagaaggacacgacttagatggtgtt
tccatctctgatctcaagagtggaggagtaggagggagcaacaccaactggaaaacttta
tatgacgttaaagcagagaacctgggccaaggtgacaaggcagactattttagctcggtg
gcaacagtggtgtttcttcgcaaagagaactctatgtaccaggcctgcccgactcaggac
tgcaataagaaagtgattgatcaacagaatggattataccgttgtgagaagtgtaaccgt
gaatttcccaatttcaagtaccgcatgatcctgtcagtaaatattgcagattttcaagac
aatcagtgggtgacttgtttccaggagtctgctgaagccatcctcggtcaaaacactgct
tatctgggggaactgaaagacaagaatgaacaggcatatgaggaagtttttcaaaatgcc
aattttcgatctttcacgttcaagatcagggtcaaactagagaactacaatgacgagtct
cgaatcaaggccacggtgatggacgtgaagcctgtggactacagagaatatggcagaagg
ctgatcacaaacatcaggagaaactcagtaatgtga
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