Lemur catta (Ring-tailed lemur): 123620949
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Entry
123620949 CDS
T08326
Symbol
DHX58
Name
(RefSeq) probable ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
123620949 (DHX58)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcat04054
]
123620949 (DHX58)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123620949 (DHX58)
Pattern recognition receptors [BR:
lcat04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
123620949 (DHX58)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
Helicase_C
ResIII
DEAD
SWI2_SNF2
AAA_19
Terminase_6N
Motif
Other DBs
NCBI-GeneID:
123620949
NCBI-ProteinID:
XP_045382511
LinkDB
All DBs
Position
15:complement(39358543..39371905)
Genome browser
AA seq
678 aa
AA seq
DB search
MELRPYQWEVIMPALEGKNIIIWLPTGAGKTRAAAYVAKRHLETVDGAKVVVLVNRVHLV
TQHGEEFSRMLDGRWTMTTLRGDMGPRAGFGHLARCHDLLICTAQLLQMALTSTEEEEHV
ELTAFSLLIVDECHHTHKDTVYNVILSRYLENKLWRACPIPQVLGLTASPGTGRASKLDG
AIDHILQLCANLDTWRIMSPQNSRPQLQEHNQRPCKQYDLCNRRSQDPFGDLLKELMGQI
HDHLEMPELSRDFGTQTYEQRVMELSQDAAKAGLQQRRVHALHLRRYNDALLIHDTVRAV
DALDTLQDFYDRERITKTQILCAERWLLALFHDHKNALARLATHGPENPKLEMLEKILRK
QFSSPNSPRGIIFTRTRQSAHSLLLWLHQQPGLRTMDIRAQLLIGAGNNSQSTHMTQSNQ
EEVIQKFRDGTLNLLVATSVAEEGLDIPQCNVVVRYGLLTNEISMVQARGRARAGQSVYS
FVAAEGSRELRRELTNEALETLMEQAVAAVQNMDQAEYQAKIRDLQQAALVKRAAQVAQR
ESRRQQFSAEHVQLLCINCMVAVGHGSDLKKVEGAHHVNVNPNFSIYYTVSQEPVVINRV
FKDWKPGGAVRCRNCGEGWGMQIIYKSVKLPALKVRSMLLQTPQGRIQAKKWSCVPFPVP
DFDFLQHCAQNLQDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcgaccctatcaatgggaagtgatcatgcctgccctggagggcaagaatatc
atcatatggctgcccacgggtgctgggaagacccgggcagctgcttacgtggccaagagg
catctagagactgtggatggagccaaggtcgttgtgttggtcaatagggtgcacctggtg
acccagcacggtgaagagttcagccgcatgttggacggacgctggaccatgacaaccctg
cgaggagacatggggccacgtgctggctttggccacctggcccggtgccacgacctgctc
atctgcacagctcagctgctgcagatggcactgactagcactgaggaggaggagcacgtg
gagctcaccgccttctccctgctcatagtggatgagtgtcaccacacgcacaaggatact
gtctacaatgtcatcctgagccggtacctagagaacaaactctggagggcatgccctata
ccccaggtgctgggtctcacagcctccccaggcaccggcagggcctctaagctcgatggg
gccattgaccacatccttcagctgtgtgccaacttggacacgtggcgcatcatgtcaccc
cagaactcccgcccccagctgcaggagcacaaccagcggccctgcaaacagtatgacctc
tgcaacaggcgcagccaggatccatttggggacttgctaaaggaactcatgggccaaatc
catgaccacctcgagatgcctgagttgagccgggactttgggacgcagacttatgagcag
cgagtgatggagttgagtcaggacgccgctaaggccgggctgcagcagcggcgcgtgcat
gcacttcacctgcggcgctacaacgacgcgctgctcatccacgacacggtccgcgccgtg
gacgccctggacacgctgcaggatttctacgacagggagcgcatcactaaaacccagatc
ctgtgtgccgagcgctggctgctggcgctgttccatgaccacaagaatgcactggcccgc
ttggcaactcacggcccagagaatccaaaactggagatgttggaaaagatccttcgaaag
cagttctcaagccccaacagcccccggggcatcatcttcacccgcacccgccagagcgct
cactccctcctgctctggctccaccagcagccgggcctgcggaccatggatatcagagcc
cagctgctgattggggccgggaacaacagccaaagcacccacatgacccagagtaaccag
gaagaagtgatccagaagttccgggatggcaccctgaaccttctggtggccacgagcgtg
gcggaggaggggctggacatcccccagtgcaacgtggtggtgcgctatgggctcctgacc
aatgagatctccatggtccaggcaaggggccgtgcccgggcgggtcagagcgtgtactcc
tttgtagcggctgagggcagtcgggagctgcggcgggagctgaccaacgaggcactggag
acgctgatggagcaggcagtggctgctgtgcagaacatggaccaggccgagtaccaggcc
aagatccgggatctgcagcaggcagccctggtcaagcgggcagcccaggtggcccagcgg
gagagtcggcggcagcagttctccgcagagcatgtgcagctactctgcatcaactgcatg
gtggccgtgggccacgggagtgacctgaagaaggtggagggtgcccaccacgtcaatgtg
aaccccaacttctcgatctactacactgtctcccaggagcctgtggtcatcaacagagtc
ttcaaggactggaagcccgggggtgctgttcgctgcaggaactgtggggagggctggggt
atgcagataatctacaagtccgtgaagctgccagcgctcaaagtccgcagcatgctgctg
cagacccctcaagggcggatccaggccaaaaagtggtcctgcgtgcccttccctgtgcct
gacttcgacttcctgcagcactgtgcccagaacctgcaggacctctccctggactga
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