Lemur catta (Ring-tailed lemur): 123621002
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Entry
123621002 CDS
T08326
Symbol
DHX8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
123621002 (DHX8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lcat03041
]
123621002 (DHX8)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
123621002 (DHX8)
Spliceosome [BR:
lcat03041
]
Complex C
Other components
Step II factors
123621002 (DHX8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
Flavi_DEAD
AAA_16
T2SSE
TsaE
PhoH
ABC_tran
Sigma54_activ_2
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
123621002
NCBI-ProteinID:
XP_045382617
LinkDB
All DBs
Position
15:40247783..40278088
Genome browser
AA seq
1223 aa
AA seq
DB search
MAVAVAVAGPVIGSEPGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKN
TTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPPAKPSTSKDPVVKPKTEKEKLKELFP
VLCQPDNPSVRTMLDEDDVKVAVDVLKELEALMPSAAGQEKQRDAEHRDRTKKKKQRSRS
RDRDRDRDRDRDKERNRDRDHKRRHRSRSRSHSRTRERNKGKSRYRSRSRSQSPFKERKD
RDKYGERNLDRWRDKHVDRPPPEEPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHI
SELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMKDVDQETGEDLNPNRRRNLVGE
TNEETSMRNPDRPTHLSLVSAPEVEDDSLERKRLTRISDPEKWEIKQMIAANVLSKEEFP
DFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPIKIVKNPDGSLSQAAM
MQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPDAEGRQIAANMRGIGMMPNDIPE
WKKHAFGGNKASYGKKTQMSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQ
ITQYLAEAGYTSRGKIGCTQPRRVAAMSVAKRVSEEFGCCLGQEVGYTIRFEDCTSPETV
IKYMTDGMLLRECLIDPDLTQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRQDMKLIVTS
ATLDAVKFSQYFYEAPIFTIPGRTYPVEILYTKEPETDYLDASLITVMQIHLTEPPGDIL
VFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVI
ATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPG
KCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITA
MEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNV
FYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQD
IRKQMLGIMDRHKLDVVSCGKSTVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHP
SSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQR
LEPLYNRYEEPNAWRISRAFRRR
NT seq
3672 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggctgtggccgtggcggggcccgtaatcggttcggagccaggccccgcggaa
gaacttgcgaaactcgaatatctgtctttggtgtcgaaggtttgcactgagctggacaat
cacttggggatcaacgacaaggatttagctgaatttgtgatcagtcttgccgagaaaaat
accacctttgatacttttaaggcttctctggtcaaaaatggtgcagaattcacggattct
cttattagtaacttgctgcgtctcatacaaaccatgcggcctccagcaaaaccttctacc
agcaaagatccagttgttaaaccgaaaactgaaaaggaaaagctgaaggaactcttccca
gtcctttgccaaccagacaacccttctgtccggaccatgctggatgaggatgatgtgaaa
gttgctgtggacgtcctgaaagaattggaagctttgatgcccagtgcagcaggccaggaa
aagcaaagagatgctgagcacagggacaggacgaagaagaagaagcagcggagtcgaagc
cgagatcgagacagagacagagatcgagatcgagataaagaacgaaaccgagatagagac
cacaagcggagacaccgatcccgctctcggtcacattccaggacccgggagaggaataaa
gggaagtctagatatcggtccaggagcagaagtcagagtccctttaaagaacggaaggac
cgggataaatatggggagaggaatctggacagatggcgggataaacatgtggaccgtcct
ccccctgaagagcctgccattggggacatttacaatggcaaagttaccagcatcatgcag
tttggatgctttgtgcagctggaaggactaaggaagcgatgggaaggcctcgtgcacatc
tctgagctccggcgggagggccgagtggccaatgtggctgatgtggtgagcaaaggccag
agggtcaaagtcaaagtgctgtccttcaccgggaccaagactagcctgagcatgaaggac
gtggaccaagagactggagaagatttaaacccaaatcgacggcgaaatcttgttggggag
accaatgaggagacctcaatgcggaatccggacagacccactcacctctcccttgtcagt
gcccctgaagtagaagatgactcactggagcgcaagcgcctcacccgcatctctgatcca
gaaaagtgggagatcaaacagatgattgctgccaatgtcctttccaaagaagaatttcca
gactttgatgaagagactggcattctgcctaaggtggatgatgaagaagatgaggacctg
gagatcgaactggttgaggaagagcctccattcctgagagggcacaccaagcaaagcatg
gacatgagccccattaaaattgttaagaacccagatggctccctctcccaagcagcgatg
atgcagagtgccttagctaaagaaaggcgggaactcaaacaggcacagcgggaagccgag
atggattctattcccatgggactcaacaaacactgggttgatcctctgcctgatgcggaa
ggcaggcagattgctgccaacatgaggggtattgggatgatgcctaacgacattcccgag
tggaagaagcatgcctttgggggcaacaaagcttcttatggaaaaaagacccagatgtca
atccttgagcagagggagagcctgcccatctacaaactgaaggaacagctggtccaggct
gtccatgacaaccagatcctgattgttatcggagagacaggatctgggaagacaacgcag
atcacccagtacctggcagaggccggctacacttccaggggcaagattgggtgtacccag
cccagaagagtggcagccatgtcggtggccaaaagagtatcagaagagtttggttgttgc
ttaggccaagaggtgggctataccattcgatttgaggactgcaccagccccgaaacagtc
atcaagtacatgacagatgggatgttgctcagagagtgcctgattgaccctgacctcact
cagtatgccatcatcatgttggacgaggcacatgagaggacaatccacactgacgtgctc
tttggattgttgaaaaagacagttcagaaacggcaggacatgaagctgattgtcacctca
gccaccttggatgcagtgaagttttctcagtacttctatgaagctcctatcttcaccatc
ccaggtcgaacatatccagtggaaatactgtacacaaaggagcccgagacagattatctg
gatgccagcctgatcactgtcatgcagatccatttaacggagccaccaggtgacatcctg
gtcttcctgactggtcaggaggagatcgatactgcttgcgagatcctgtatgaaagaatg
aaatccctgggacctgacgttccagagttaattatcctcccagtatactctgcccttccc
agcgagatgcagacccgaatctttgatcctgctccaccaggcagcagaaaggttgtgatt
gccaccaacatcgcagagacatcgctgactatagatggcatctactatgtggtggaccct
ggatttgtgaagcagaaagtttataattcgaagacagggattgaccagcttgtggtgacg
cctatttctcaggctcaggcaaagcaacgagctggcagagctgggagaacaggcccaggg
aagtgttacaggctgtacacggaacgtgcctaccgagatgaaatgctgaccaccaacgtg
ccagaaatccagagaaccaacttagccagcacagtgctgtcgctcaaggccatgggcatc
aatgacctgctgtcctttgatttcatggatgccccaccaatggaaactttgatcacagcc
atggagcagctgtacacactgggggccctggacgacgagggcctactcactcgcctgggc
cgcaggatggcagagtttcctctggagccaatgctgtgcaaaatgctcatcatgtctgtg
catctgggctgcagtgaagaaatgctgaccattgtatccatgctgtctgtgcagaacgtc
ttctacaggcccaaggataaacaagcccttgcagatcagaagaaggcaaagtttcaccag
accgagggggaccacctcaccctactggctgtgtacaactcgtggaagaacaacaagttc
tccaacccatggtgctatgagaacttcatccaagctcgttccctgcgccgggcccaggac
attcgcaagcagatgttaggcataatggacagacacaagctggatgtcgtttcttgtggc
aagtccacagtccgagtgcagaaggccatctgcagtgggttcttccgtaatgctgccaag
aaagatcctcaggagggttaccggacactgatcgaccagcaggtggtctacatccatcct
tccagtgctctcttcaacagacagccggaatgggtggtgtaccatgagctggtgctgacc
acgaaggaatacatgcgtgaggtcaccaccattgaccctcggtggcttgtggagtttgct
ccagccttcttcaaggtctccgacccaaccaagctaagcaaacagaagaagcagcagcgg
cttgaacccttgtacaaccgatacgaggagcccaacgcctggagaatatcccgggccttc
cggcggcgctga
DBGET
integrated database retrieval system
