Lemur catta (Ring-tailed lemur): 123621651
Help
Entry
123621651 CDS
T08326
Symbol
NPC1
Name
(RefSeq) NPC intracellular cholesterol transporter 1 isoform X1
KO
K12385
Niemann-Pick C1 protein
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
lcat04142
Lysosome
lcat04979
Cholesterol metabolism
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
123621651 (NPC1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
123621651 (NPC1)
09150 Organismal Systems
09154 Digestive system
04979 Cholesterol metabolism
123621651 (NPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lcat02000
]
123621651 (NPC1)
Transporters [BR:
lcat02000
]
Solute carrier family (SLC)
SLC65: NPC-type cholesterol transporter
123621651 (NPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NPC1_MLD
NPC1_N
Sterol-sensing
Patched
MMPL
ACR_tran
Motif
Other DBs
NCBI-GeneID:
123621651
NCBI-ProteinID:
XP_045383504
LinkDB
All DBs
Position
16:complement(16435423..16476994)
Genome browser
AA seq
1294 aa
AA seq
DB search
MGARGPAVGLLLLLLCPAQVFSQSCVWYGECGIASGDKRYNCKYSGPPKPLPKDGYDLVQ
EHCPGFFFDNVSLCCDVQQLRTLKDNLQLPLQFLSRCPSCFYNLLTLFCELTCSPRQSQF
LNVTATEDYVDPATNQTRTNVKELQYYVGQSFANAMYNACRDVEAPSSNDKALGLLCGKD
AAACNATNWIEYMFNKDNGQAPFTITPIFSDLPLHGMEPMNNATKGCDESVDEVTGPCSC
QDCSATCGPKPQPPPPPVPWRLFGLDAMYVIMWLTYMAFLLVFFGGFFAVWCYRKRYFVS
EYTPIDSNIAFSVNASDKGMSRLLTFTLPSSPALPGEASSCDPLGAAFEGCLRRLFTQWG
SFCVRNPGCVIFFSLVFIVACSSGLVFVRVTTNPVDLWSAPASQARLEKEYFDQHFGPFF
RMEQLIIQAPLTKKHTYEPYPSGADVPFGPPLDIDILHQVLDLQTAIENITASYNNETVT
LQDICVAPLSPYNKNCTIMSVLNYFQNSHSVLDHKIGDDFFVYADYHTHFLYCVRAPTSL
NDTSLLHDPCLGTFGGPVFPWLVLGGYDDQNYSNATALVITFPVNNYYNDTEKLQRAQAW
EKEFINFVKNYKNPNLTISFSAERSIEDELNRESNSDIFTVVISYAIMFLYISLALGHIK
SCRRLLVDSKVSLGIAGILIVLSSVTCSLGIFSYIGIPLTLIVIEVIPFLVLAVGVDNIF
ILVQTYQRDERLQGETLDQQLGRVLGEVAPSMFLSSFSETVAFFLGALSMMPAVHTFSLF
AGLAVFIDFLLQITCFVSLLGLDIKRQEKNRLDILCCLRGAEDGTGVQASESCLFRFFKH
SYAPLLLKEWMRPIVIAVFVGVLSFSIAVLNKVEIGLDQHLSMPDDSYVVDYLKSISQYL
HAGPPVYFVLEEGHDYTSPKGQNMVCGGVGCNNDSLVQQIFNAAQLDNYTRIGFAPSSWI
DDYFDWVKPLSTCCRVYNISGQFCNASVVDPACVRCRPLTPEGRQRPQGGDFMRFLPMFL
SDNPNPKCGKGGHAAYSSAVNILGNDTGVGATYFLTYHTMLQTSADFIDALRKARRIASN
ITETMGINGSDYRVFPYSVFYVFYEQYLTIIDDTVFNLGVSLGAVFLVAVVLLGCELCSA
VIMCATIAMVLVNMFGVMWLWGISLNAVSLVNLVMSCGISVEFCSHITRAFTVSTKGSRV
ARAEEALAHMGSSVFSGITLTKFGGIVVLAFAKSQIFQIFYFRMYLAMVLLGATHGLVFL
PVLLSYIGPSINKAKSRATEDRYRGTERERLLNF
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgggcgcgcgcggtccggccgtcggcctcctgctgctgctgctctgcccggcgcaggtg
ttttcacagtcctgtgtttggtatggagaatgtggaattgcatctggggataagaggtac
aattgcaaatattctggcccaccaaaaccattgccgaaggatgggtatgacttagtgcag
gaacactgtccaggattcttctttgacaatgtcagtctctgttgtgatgttcagcagctt
cggacactgaaagacaacctgcagctgcctctacagtttctatccagatgtccatcctgt
ttttataacctgctgaccctgttttgtgagctgacatgtagccctcgacagagtcagttt
ctgaatgttacagcaactgaagattatgtggatcctgctacaaaccagacgaggacaaac
gtgaaagagttacagtactatgttggacagagttttgccaacgcaatgtacaatgcctgc
cgggacgtggaggccccctcaagtaacgacaaggccctgggtctcctgtgtgggaaggat
gctgctgcctgcaatgccaccaactggattgagtacatgttcaataaggacaacggacag
gcaccgttcaccatcacccccatcttttcagatcttccactccacgggatggagcccatg
aataatgccaccaaaggctgtgatgagtctgtagacgaggtcacaggcccgtgcagctgt
caggactgctccgccacctgtggccccaagccccagcccccgccccctccagttccctgg
aggctcttcggcttggacgccatgtatgtcatcatgtggctcacctacatggcatttttg
cttgtgttctttggaggattttttgcagtgtggtgctacagaaaacggtattttgtctcc
gagtacactcccattgatagcaacatagctttttctgtgaatgccagtgataaaggaatg
tcacggctcttaaccttcaccctcccttcctctcccgcccttccaggggaggcgtccagc
tgcgacccactgggcgcagcatttgagggctgtttgaggcggctgttcacgcagtggggg
tctttctgcgtccgaaaccccggctgtgtcattttcttctctctggtcttcatcgtggca
tgttcttcaggcctggtgtttgtccgggtcacgaccaacccagtcgacctctggtcggcc
ccagccagccaagctcgcctggagaaagagtactttgaccagcactttgggcctttcttc
cggatggagcagctcatcatccaggccccgctcaccaaaaaacacacctacgagccctac
ccctcaggagccgacgtgccatttggacctccgcttgacatagacattttgcaccaggtt
cttgacttacaaacagccattgaaaacattactgcctcttataacaacgaaactgtgact
cttcaggacatctgcgtagcccctctctcaccatataacaagaactgcaccattatgagt
gtgttaaattacttccagaacagccactctgtgctggaccacaaaataggggacgacttc
tttgtgtatgctgattaccacacacactttctgtactgtgtacgggcccctacctctctg
aatgatacaagtctgctccatgatccctgtctggggacgtttggtggaccagtgttcccg
tggcttgtgttaggcggctatgatgatcaaaactacagtaacgccactgcccttgtgatt
accttccctgtcaataattactataatgatacagagaagctccagagggcccaggcctgg
gaaaaagagtttattaattttgtgaaaaactacaagaatccaaatctgaccatttctttc
tctgctgaacgaagtattgaagatgaactaaatcgtgaaagtaacagtgatatcttcacc
gttgtaattagctatgccattatgtttctatatatttccctggccttggggcacatcaaa
agctgtcgcaggcttctggtggattcgaaggtctccctaggcatcgcgggcatcctgatc
gtgttgagttcggtgacatgctcgttgggcatcttcagctacattgggatccccctgacc
ctcatcgtgattgaagtcatcccgttcctggtgctggctgtcggggtggacaacatcttc
atcctggtgcagacctaccagagagatgaacgtcttcaaggggaaaccctggatcagcag
ctgggcagggtcctaggagaagtggctcccagtatgttcctgtcatccttttctgagact
gtagcgtttttcttaggagcactgtccatgatgccagccgtgcacaccttctccctgttc
gcgggactggccgtcttcattgacttcctcctgcagattacctgttttgtgagtctcttg
gggttagacattaaacgccaagagaaaaatcggctagacatcctctgctgcttgaggggc
gcggaggacggcacaggcgtgcaggcctcagagagctgtttgtttcgcttcttcaaacac
tcctatgccccactcctgctgaaggagtggatgcgaccgattgtgatagcagtgtttgtg
ggtgtcctgtcattcagtatcgcagtcctaaacaaagtagaaattggattggatcagcat
ctctcaatgccagacgactcctatgtggtggattatctcaaatccatcagccagtacctg
catgcgggtccgcctgtgtactttgtcctggaggaagggcacgactatacttctccaaag
gggcagaacatggtgtgcggcggcgtgggctgcaacaacgactccctggtgcagcagata
tttaacgcggcgcagctggacaactatacccggataggctttgccccctcgtcctggatc
gacgattatttcgactgggtgaagccgctgtctacgtgctgcagggtctacaatatcagt
ggccagttctgcaatgcctcggtggttgacccggcgtgcgtccgctgccggcctctgact
ccggagggcagacagaggcctcagggcggggacttcatgagattcctgcccatgttcctc
tctgataaccccaaccccaagtgtggcaaagggggacatgctgcttacagctcggcagtg
aacatcctcggcaatgacactggggtcggagccacgtacttcctgacctaccacaccatg
cttcagacctctgccgacttcatcgacgctctgagaaaagcccgccgtatagccagcaac
atcaccgaaaccatgggcatcaacggcagcgattaccgcgtcttcccgtacagtgtgttt
tatgtcttctacgaacagtacctgaccatcattgacgacacggtcttcaacctcggcgtg
tccctgggagcagtgtttctggtggccgtggttctcctgggctgcgagctgtgctccgcg
gtcatcatgtgtgccaccatcgccatggtcctggtcaacatgttcggagtcatgtggctc
tggggcatcagcctgaacgcagtgtccttggtcaacctggtgatgagctgtggcatctcc
gtggagttctgcagccacatcaccagggcgttcacggtgagcacgaaaggaagccgcgtg
gcccgcgcagaagaggcgctcgcccacatgggcagctccgtattcagtggaatcacactt
acaaagtttggcgggatcgtggtgctggcctttgccaaatctcaaattttccagatattt
tacttcaggatgtatttagcgatggtgttactgggagccacccacggcttagtatttctc
ccggtcttgctcagctacataggaccgtcaataaataaagccaaaagtcgtgccaccgaa
gaccgataccgaggcacagagcgagaacgactcctcaatttctag
DBGET
integrated database retrieval system
