Lemur catta (Ring-tailed lemur): 123622129
Help
Entry
123622129 CDS
T08326
Symbol
SH3TC1
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123622129 (SH3TC1)
Membrane trafficking [BR:
lcat04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
123622129 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_8
TPR_NPHP3
TPR_2
TPR_1
TPR_7
SH3_2
SH3_1
Csd3_N
Motif
Other DBs
NCBI-GeneID:
123622129
NCBI-ProteinID:
XP_045384200
LinkDB
All DBs
Position
17:4575161..4626505
Genome browser
AA seq
1342 aa
AA seq
DB search
MEGPAKVTTGQLTQMGRGLAGPPGGCSSRDEVQTVAMSSPAGQERAGPEGAKAAVRGDAA
PPPGTPGPAAGSTPGQMGAYPTDLTLQLLAVRRKSGLRDPCLQQALRARLRLLENDSRVV
ARALGELSARLLSIHSDQDRVVVMFKTFEEIWKFSTYHALGFTHHCLENLLVDQAFWLLS
PGEEEETAIRVHVDEDALKLTHESLLMQDGPFFVLCPDYHVRVTTGPGGTGRGPQPLRRA
SGGPQGEVAPEAGLSASPSMSCEEVAAATPEPLIPFHQWALRLHWDPIDDSVGEPATPNT
PLMAVGLAQAVADCQGSGPEEMTFRGGDLIEILGAQVPGLPWCVGRHVASGQVGFVRTHL
ISTQGPASELESVIFLSEEERSFFSNEGRFSEEDARQLLRRMSATDVCTVYSLDRLEETE
LEQLEGQEMPPPCLNPEPHETLQKVKNILEQCKTCPDCPEEPASWGLPAMSSGVSSPDTK
EPAFHLDPEDDWTDPEALGPLLLVLNAPGYRACFRGLYDASLPWLSSVFCSFTDEEELAA
CLAQARGAAKKAGLPMALARLCFLLGRLCARRLKLSQARVYFEEALGALGGSFGDLFLVV
AMYTNLATVYLKQKNKEKSAQAVPKAAALLLGTPGHVGSAEAEAELLKYALRRAVGGRSL
QAEARACFLLARHHVHLKQPEEALPFLERLLLLHRDLGAREASWPSDCYLLLADVYSRKC
LPHLALSCIKVASLQAPCSLASSLRSVDLVLRNAPWLHGQRQAAHSLPSQTAHYLRQALA
SPASGAGCALCGPLYASLAQLHSHHGQHGPAIVFMIQAVEADAVAGVHPVVDHLVALAWL
HVLHGQSQVALDILESILDAAVASVDQEGVIANMAAVALKRTGRTRQAAEGYYRALRVAR
GLGQLRNQAVVLANFGALCLHTGASRLAQHYFLEAVRLFSRLPSRECGRDFTQVLLQLGH
LCTCRTLTQQGKCYYEWAFLVAVETDHLESQLQAVQRLCHFYSTVMPSEAQCVIYHEFQL
ALARRVADKVLEGQLLETISQLYLSLGTERAYKSALDYTKRSLGIFIDLQEKEKEAHAWL
QAGKIYYILRQNELVDLYIQVAQNAALYTGDPNLGLELFEAAGDIFFNGTWEREKAVSFY
RDRALPLAVTTGNQEAELRLCNKLVALLAALEAPQEGLEFAHTALALSITLGDRLNERVA
YHRLATLHHRLGHGELAEHFYLKALSLCSSPLEFDEESLYYVKVYLVLGDIIFYDLKDPF
DAAGYYQLALAAAVDLGNKKAQLKIYTRLATIYHNFLLDREKSLFFYQKARTFATELNVR
RINLAPPRLCGRAPWLAPGHPP
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggagggccccgccaaggtgaccactgggcagctgacccagatggggagggggctggca
gggcccccaggaggctgcagcagcagggacgaggtccagactgtggccatgagctcaccc
gccggccaggagcgagcggggcctgagggggccaaggctgctgtcagaggcgatgcagcc
cctcccccgggcacccctgggcctgctgctgggagcacccccggccagatgggagcatat
cccacagacctgacgctgcagctgctggccgtgcggaggaagagtgggctgcgggacccc
tgcctgcagcaggccctgcgggcccggctccgcctgctggagaacgacagccgggtggtg
gcgcgtgcgctgggggaattatcggcgaggctgttgtctatccacagtgaccaggatcgg
gtcgtggtgatgtttaagactttcgaagaaatctggaagttctccacctaccacgctctt
ggcttcacgcatcattgcctggaaaacctgcttgtggaccaggccttctggctgctctcg
cccggcgaggaggaggagacggccatccgagtccacgtggacgaggacgccttgaagctg
acccacgagagcctcctcatgcaagacgggcccttctttgtcctgtgtcctgactaccac
gtgagagtgacgactggccctgggggtacagggaggggcccccagcccctcaggcgggct
tcggggggtccccagggagaggtggccccagaagcaggcctctcggcgagccccagcatg
tcctgcgaggaagtggcggcggccaccccggaacctctgatcccgtttcatcagtgggct
ctcaggctccactgggaccccatcgatgactccgtgggtgagccagcgacacccaacacc
ccgctgatggctgtgggcctggcccaggcggtggctgactgccagggctcggggcctgaa
gagatgaccttccgaggtggcgacctcattgagatcctcggcgcccaggtgcctggcctg
ccctggtgcgtgggccgacacgtggcctcaggccaggtcgggtttgtgcggacccatctc
atcagcacgcagggcccggcttccgaattggaaagtgtgatctttctcagtgaggaagaa
aggtcattcttcagcaacgagggccgcttttctgaagaggacgccaggcagttactgagg
agaatgtcggccacagacgtctgcaccgtgtacagcctggacagattagaagaaactgag
cttgagcagctggaaggacaagaaatgcctccaccttgcctgaacccagagcctcatgag
accctgcagaaggtgaagaatattctagaacaatgcaagacctgcccggactgccctgag
gagccagcatcctggggtctccctgcaatgtccagtggtgtgagctcgccagacacaaag
gagcccgccttccacctggaccctgaggacgactggactgacccagaggccctgggccca
ctgctgctggtcctgaacgcccctgggtatcgggcctgcttccgcggcctgtacgacgcc
tctctgccgtggctgagcagcgtgttctgcagcttcactgacgaggaggagctggctgca
tgcctggcgcaggcccggggagcagccaagaaagccggcctgcccatggccctggccagg
ctctgcttcctcctgggccggctgtgcgccaggaggctcaagctgtcccaggcccgggtg
tacttcgaggaagccctgggggccctggggggcagctttggggacctcttcctggtggtg
gccatgtataccaacctggccaccgtttacctgaagcagaagaacaaggagaagagcgca
caggcggtgcccaaagccgcggccctgctcctggggacgcccggccacgtgggcagcgcc
gaggcagaggcagagctcctcaagtacgcgctgcggcgggccgtgggtggccggagcctg
caggccgaggcccgggcctgcttcctgctggccaggcaccatgtccacctcaagcagccc
gaggaggccctgcccttcctggagagactgctgcttctgcacagggacttgggggcccgg
gaggcctcgtggccctcggactgctacctgctcctggcggacgtctatagccggaagtgc
ctgccccacctggccctcagctgcatcaaggtggcctcgctgcaggcaccgtgctccctg
gccagctcgctgaggagcgtagacctggtgctccggaatgccccctggctccacggccag
aggcaggcggcccacagcctcccctcccagacagcccactacctcaggcaggcgctggcc
tccccggcctcgggtgcggggtgtgcactgtgcggccccctctacgccagcctggcccag
ctacacagccaccacgggcagcacgggccggccatcgtcttcatgatccaggcggtggaa
gcggatgccgtggccggagtccaccctgttgtggaccacctggtggcccttgcctggctg
cacgtgcttcatgggcagagccaggtggctctggacatcctggagtccatcctggatgca
gcagtggccagcgtggaccaggagggcgtgatcgccaacatggcagctgtggccctgaag
aggaccggcaggacccggcaggcggccgagggctactaccgcgccctgcgtgtggccagg
ggcctgggccagctgcggaaccaggcagtggtgctggccaacttcggggcgctgtgtctg
cacacgggtgccagcaggctggcccagcactacttcctggaggccgtccggctcttctcc
aggctgcccagcagagagtgtggccgggacttcacccaggtgctcctgcagctgggccac
ctctgcacctgccggaccctcactcagcagggcaagtgctactacgagtgggcctttctg
gtcgccgtggagacggaccacctagagagccagctgcaagccgtccagcggctgtgccac
ttctacagcaccgtcatgcccagtgaggcccagtgcgtcatctaccacgagttccagctc
gcgctggcccgcagggtggctgataaggtgctggaggggcagcttctggagaccatcagc
cagctctacctgtccctgggcacagagcgggcctacaaatccgccctggactacaccaag
cggagtctggggatattcatcgacctccaggagaaggagaaggaggcacatgcctggctg
caggcggggaagatctactatatcctgcggcagaacgagctggtggacctatacatccag
gtggcgcagaatgcggccctgtacacaggcgaccccaacctggggctggaactgttcgag
gcagctggagacatcttcttcaacgggacctgggagcgggagaaggctgtgtccttctac
cgggaccgggcactgcccctggcagtgaccacgggcaaccaggaggcagagctgcggcta
tgcaacaagctggtggcactgctggctgcactagaggcgccccaggagggcctggagttt
gcacacacggccctggctctcagcatcaccctgggggaccggttgaacgagcgcgtggcc
tatcaccggctggccaccctgcaccaccgcctgggccacggcgagctggctgagcacttc
tacctcaaggcgctgtcactctgcagctctccgctggagtttgacgaggagagcctgtac
tacgtgaaggtgtacctggtgctcggagacatcatcttctacgacctcaaggacccattc
gatgcggccgggtactatcagctggcgctggcggcggccgtggacctgggcaacaagaag
gcccagctgaagatctacacgcggctggccaccatctaccacaacttcctcctggaccgt
gagaagtccctcttcttctaccagaaggcacggaccttcgccaccgagctcaacgtccgc
aggatcaacctggctcccccgaggctctgtgggcgggccccctggctggcacctggccac
ccaccctga
DBGET
integrated database retrieval system
