Lemur catta (Ring-tailed lemur): 123622621
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Entry
123622621 CDS
T08326
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04512
ECM-receptor interaction
lcat04514
Cell adhesion molecule (CAM) interaction
lcat04820
Cytoskeleton in muscle cells
lcat05205
Proteoglycans in cancer
lcat05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123622621 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
123622621 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123622621 (SDC4)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
123622621 (SDC4)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
123622621 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcat00535
]
123622621 (SDC4)
Proteoglycans [BR:
lcat00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
123622621 (SDC4)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Syndecan
DUF8063
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
123622621
NCBI-ProteinID:
XP_045385092
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All DBs
Position
17:14763456..14783448
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AA seq
199 aa
AA seq
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MAPARLLALLLLFLGAPAAAESIRETEVIDPQDLLEGRYSGALPDDEDVGGPGQEPDDLE
LSGSGEPDDSEDPKVFSEVIHPLVPVDNHIPERAGPGRQVPTEPKELEENEVIPKRISPF
DGEEDVSNKVSMSSTAQNSNIFERTEVLAALIVGGVVGILFAVFLILLLVYRMKKKDEGS
YDLGKKPIYKKAPTNEFYA
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgcccgcctgctcgcgctactcctgctcttcttgggcgcccccgccgccgcc
gagtcgatacgggagactgaggtcatcgacccccaggacctcctggaaggccggtactcg
ggagccctaccagatgatgaggatgtggggggccctgggcaggaacccgatgacttggag
ctgtccggctctggagaaccggatgactcagaggaccccaaagtcttctctgaagtgatc
caccccttggtgcctgtagataaccacatccctgagagggcagggcctgggcgccaggtc
cccaccgaacccaaggaactggaggagaacgaggttatccccaagaggatctcacccttt
gatggggaagaggatgtgtccaacaaggtgtccatgtccagcactgcccagaacagcaac
atctttgagagaacagaggtcctggcagctctgattgtgggtggcgtggtgggcatcctc
ttcgccgtgttcctgatcctgctgctggtgtaccgcatgaagaagaaggacgagggcagc
tatgacctgggcaagaaacccatctacaaaaaagcccccaccaatgagttctacgcatga
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