Lemur catta (Ring-tailed lemur): 123622760
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Entry
123622760 CDS
T08326
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04151
PI3K-Akt signaling pathway
lcat04510
Focal adhesion
lcat04512
ECM-receptor interaction
lcat04820
Cytoskeleton in muscle cells
lcat04974
Protein digestion and absorption
lcat05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
123622760 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
123622760 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
123622760 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
123622760 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
123622760 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
123622760 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lcat00535
]
123622760 (COL9A3)
Proteoglycans [BR:
lcat00535
]
Extracellular matrix (ECM) proteoglycans
Others
123622760 (COL9A3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
123622760
NCBI-ProteinID:
XP_045385292
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Position
17:50510727..50530787
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AA seq
680 aa
AA seq
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MARAPALALLLLGPLLAAAGAQKVGPPGPPGPQGPPGKPGKDGIDGEAGPPGLPGPPGPK
GAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGNLGPPGPPGLGGKGLPGPPG
EAGVSGLPGGIGLRGPPGPSGPPGLPGPPGPPGPPGHPGVLPEGATDLQCPSVCPPGPPG
PPGMPGFKGPTGYKGEPGEVGKDGEKGDPGPPGPAGIPGTVGQQGPRGLRGLPGPLGPPG
DRGPIGFRGPPGTPGVPGKAGDRGERGPEGFRGPKGDLGRPGPKGAPGVAGPAGEPGMPG
KDGRDGVPGLDGEKGEAGRNGGPGEKGPNGLPGLPGQAGSKGEKGELGRAGELGEAGRSG
EPGVPGDVGVPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGRKGSMGDPGLPGPQGLRG
EVGDRGPGGAAGSKGDQGIAGSDGLPGDKGEMGPSGPVGSKGESGSRGEPGPKGIQGPNG
TSGVQGVPGPPGPLGFQGVQGVPGITGKPGVPGKEASEQRIRELCGGVISEQIAQLAAHL
RKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGSQGDRGDK
GAAGAGLDGPDGDRGLPGSQGVPGVSKDGQDGALGEPGLPGDPGLPGAVGAQGTPGICDT
SACQGAVLGGGQEKSGPRSS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcgcccgcgctcgccctgctcctgctgggaccgctgctggcggccgccggg
gcgcagaaagtgggacctcctggcccccctggcccccaagggccacctgggaagccaggc
aaggatggcatcgatggagaagctggtcctccaggtctgcctgggcccccgggaccaaaa
ggggccccagggaagccggggaaaccaggagaggccgggctgccaggactgcccggcgtg
gacggcctgaccgggcgcgatggaccccctggacccaagggcgcccctggagaacgggga
aatctgggacctccggggccacccgggcttgggggcaaaggcctccccggaccccccgga
gaggcaggagtgagcggcctcccaggcgggattggcctccgcggccccccaggaccctct
ggacccccaggcctccctggccccccaggacctcctggaccccctggacacccaggagtc
ctccccgaaggcgctaccgaccttcagtgcccaagtgtctgcccgccaggcccccctggg
cccccgggaatgccagggttcaagggccccactggctacaaaggggagccgggagaagtc
ggcaaggatggcgagaagggggaccccggcccccctgggcccgccggcatccccggcacc
gtggggcagcagggcccccgggggctacgaggactgccaggcccactcgggccccccgga
gaccggggtcccattgggttccgagggccgcccgggacccctggagtgcccgggaaagcg
ggtgacagaggcgagaggggccccgagggtttccgcggccccaagggcgacctgggcaga
cctggtcccaagggagcccccggagtggccgggccagctggagagccgggcatgccgggc
aaggacggccgggacggagtgccaggactcgacggcgagaagggagaggctggtcgcaat
ggtggtccgggagagaagggtcccaacgggctgccggggctccccggacaagcagggtcc
aaaggcgagaagggagaactgggcagagccggggagctgggcgaggccggccgctcggga
gaaccaggcgtccctggggacgtcggtgtgcccggggagcgcggcgaggctggccacaga
ggctcagcgggggcccttggcccgcaaggccctcccggggcccccggcgtccgaggcttc
cagggccggaagggcagcatgggagaccccggccttccaggcccccagggcctccgtggc
gaagtgggcgacaggggtcctggaggcgctgcgggctctaagggagaccagggcatcgcg
ggctccgacggtcttcccggggataaaggcgagatgggtcccagcggccccgtcggatca
aaaggagagtctggcagtcgaggggagccgggccccaaaggcatccagggtcccaacggc
accagcggtgtccagggtgtccccggccccccggggcccctgggcttccagggcgtgcag
ggcgttcctggcatcaccgggaagccaggcgttccggggaaagaagccagtgagcagcgc
atcagggagctgtgcgggggcgtgataagtgaacaaatcgcacagttagctgctcacctg
aggaagcccttagcgccggggtccatcggccggcctggcccagccggcccccccgggccc
ccgggccccccaggctccatcggccaccctggagctcgaggacccccgggataccgcggt
cccactggtgagctgggcgaccccgggcccagagggagccagggtgaccgaggggacaaa
ggcgcggcgggcgcagggctggacgggcctgacggcgaccgggggctgccaggatcgcag
ggcgtgcccggagtcagcaaagacggccaggacggtgctctcggcgagcccgggctgccc
ggcgacccgggactgcccggcgctgtcggtgctcaggggactccagggatctgtgacacc
tcagcctgccagggcgccgtgttaggagggggccaggagaaatcaggtcctagaagctca
tga
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