KEGG   Lemur catta (Ring-tailed lemur): 123622904
Entry
123622904         CDS       T08326                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor
  KO
K14298  mRNA export factor
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat03013  Nucleocytoplasmic transport
lcat05014  Amyotrophic lateral sclerosis
lcat05164  Influenza A
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    123622904 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    123622904 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    123622904 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcat03019]
    123622904 (RAE1)
   03036 Chromosome and associated proteins [BR:lcat03036]
    123622904 (RAE1)
Messenger RNA biogenesis [BR:lcat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     123622904 (RAE1)
Chromosome and associated proteins [BR:lcat03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    123622904 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_RIG_2nd WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 123622904
NCBI-ProteinID: XP_045385552
LinkDB
Position
17:46607298..46622833
AA seq 368 aa
MSLFGTTSGFGTGGTSMFGSTTTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggaacaacctcgggttttggaactggtggaaccagcatgtttggcagc
acaaccacagataatcacaaccctatgaaggatattgaagtaacatcttctcctgatgat
agcattggttgtctatcttttagcccaccaaccttgcctgggaactttcttattgcagga
tcgtgggctaatgatgttcgctgctgggaagttcaagacaatggacaaaccattccaaaa
gcccagcagatgcacaccgggcctgtgctagatgtctgctggagtgacgatgggagcaaa
gtatttacagcatcgtgtgataaaactgctaaaatgtgggacctcaacagtaatcaagca
atacagattgcgcagcatgatgctcctgttaagaccatacattggatcaaagctccgaac
tacagctgtgtgatgactgggagctgggataagactttaaagttttgggatactcgatca
tcaaatcctatgatggttttgcaactccctgaaaggtgttactgtgctgatgtgatatac
cctatggccgtggtggcgactgcagagaggggcctcattgtctatcagttagagaatcaa
ccctctgagttcaggaggatagaatctccattgaaacatcagcatcgatgtgtagctatt
tttaaagacaaacagaacaaaccaactggttttgccctgggaagtatcgaggggagagtt
gctattcactacatcaaccccccaaatcctgccaaagataactttacctttaaatgtcat
cgatctaacggaaccaacacttcagctcctcaagacatctatgcggtaaatggaatcgca
ttccatcctgttcacggcacccttgcaactgtggggtctgatggtagattcagcttctgg
gacaaagatgccagaacaaaactaaaaacttcagaacagttagatcaaccgatatcggct
tgctgcttcaatcacaatggaaacatatttgcgtatgcttccagctatgactggtcaaag
ggacatgagttttataatccccaaaagaaaaattacattttcctacgtaatgcagcagaa
gagctaaaacccaggaataagaagtag

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