Lemur catta (Ring-tailed lemur): 123623123
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Entry
123623123 CDS
T08326
Symbol
PDZRN3
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcat04121
]
123623123 (PDZRN3)
Enzymes [BR:
lcat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123623123 (PDZRN3)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
123623123 (PDZRN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-TRAF
Sina_ZnF
zf-C3HC4_4
zf-RING_5
TRAF3_RING
Prok-RING_4
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
123623123
NCBI-ProteinID:
XP_045385849
LinkDB
All DBs
Position
18:18955552..19181282
Genome browser
AA seq
1067 aa
AA seq
DB search
MGFELDRFDGDVDPDLKCALCHKVLEDPLTTPCGHVFCAGCVLPWVVQEGSCPARCRGRL
SAKELNHVLPLKRLILKLDIKCAHAARGCARVVKLQQLPEHLERCDFAPARCRHAGCGQV
LLRRDVEAHMRDACDARPVGRCQEGCGLPLTHGEQRAGGHCCARALRAHNGALQARLGAL
HKALKKEALRAGKREKSLVAQLAAAQLELQMTALRYQKKFTEYSARLDSLSRCLAAPPGG
KGEETKSLTLVLHRDSGSLGFNIIGGRPNVDNQDGSSSEGIFVSKIVDSGPAAKEGGLQI
HDRIIEVNGKDLSRATHDQAVEAFKTAKEPIVVQVLRRTPRTKMFTPPSESQLVDTGTQT
DITFEHIMALTKMSPPSPPVLNPYLLPEEHPSAHEYYDPNDYIGDIHQEMDREELELEEV
DLYRMNSQDKLGLTVCYRTDDEDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQN
REEAVALLTSEENKNFSLLIARPELQLDEGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTA
NVLQQKKHEEDGGTTDTATILSNQHEKDSGVGRTDESTRNDESSEQENNGDDATASSDPL
AGQRKLTCSQDTLGSGDLPFSSESFISADCTDADCLGIPVDECERFRELLELKCQVKRAA
PYGLSYPGGGLDAGRSEPESVDKELELLNEELRSIELECLSIVRAHKMQQLREQCREPWM
LHHGGFRNYNTSIDVRRHELPDITELPERSDKDSSSAYNTGESCRSTPLALEISPDNSLR
RVAEGISCPGGEGAVGIPEAYGPSPKNLLAITEDPEVGTPTYSPSPQELDPGQSLENKER
RGSDGSRSPTPSPKPGGAYPATSHHSPYRHAHIPAHAQHYQSYMQLIQQKSAVEYAQSQM
SLVSMCKDLASAGPAEPPRTEWKVKIRSDGSRYITKRPVRDRLLRERALKIREERSGVTT
DDDAVSELKMGRYWSKEERKQHLVKAKEQRRRREFMLQSRLDCLREQQAADDRKEMNILE
LSHKKMMKRRNKKILDNWMTIQELLTHGTKSPDGTRVYNSFLSVTTV
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgagctggaccgcttcgacggcgacgtggacccggacctgaagtgcgcgctc
tgccacaaggtcctggaggacccgctgaccacgccgtgcggccacgtcttctgcgccggc
tgcgtgctgccctgggtggtgcaggagggcagctgcccggcgcgctgccgcggtcgcctg
tcggccaaggagctcaaccacgtcctgccgctcaagcgcctcatcctcaagctggacatc
aagtgcgcgcacgcggcgcgcggctgcgcccgggtggtcaagctgcagcagctgcccgag
cacctcgagcgctgcgacttcgcgcccgcgcgttgccgccacgcgggctgcggccaggtg
ctgctgcggcgcgacgtggaggcgcacatgcgcgatgcgtgcgacgcgcggcccgtgggc
cgctgccaggagggctgcgggctgcccctgacgcacggcgagcagcgcgcggggggccac
tgctgcgcacgggcgctgcgggcgcacaacggcgcgctgcaggctcgcctgggcgcgctg
cacaaggcgctcaagaaggaggcgctgcgcgcgggcaagcgggagaagtcgctggtggct
cagctggccgccgcgcagctcgagctgcagatgaccgcgctgcgctaccagaagaagttc
accgagtacagcgcgcgcctggactcgctcagccgctgcttggccgcgccgcccggcggc
aagggtgaagaaaccaaaagcctgactcttgtcctgcatcgggactctggctccctggga
ttcaatattattggtggccggcccaatgtggacaaccaagatggatcgtccagtgaagga
atctttgtatccaaaatagttgacagtgggcccgcagccaaggaaggaggcctgcaaatt
catgacaggattattgaggtcaacggcaaagacttatccagagcgactcatgaccaggct
gtggaagctttcaagacagccaaggagcccatcgtggtgcaggtgttgaggagaacaccc
aggacaaaaatgttcacgcctccctcagagtcacagctggtggacacaggaacccaaacc
gacatcacctttgaacacatcatggctctcaccaagatgtcccctcccagtccacctgtg
ctgaacccctatctcttgccggaagagcatccctcagcccatgaatactacgatccaaat
gactacatcggggacatccatcaggagatggacagggaggagctggagctggaggaagtg
gacctctacaggatgaacagccaggacaagctgggcctcacggtgtgctaccggacagac
gacgaagacgacattggcatttatatcagtgagattgaccctaacagcattgcagccaag
gacgggcgcatccgagaaggagaccgcattatccagatcaatgggatagaggtacagaat
cgtgaagaggctgtggctcttctaaccagtgaagaaaataagaacttttcactgctgatt
gcaaggcctgaactccagctggacgagggctggatggacgatgacaggaacgacttcctg
gacgacctgcacatggacatgcttgaggagcagcaccaccaggccatgcagttcacggcg
aacgtgctccagcagaagaagcacgaggaagacggtgggaccactgacacagccaccatc
ctgtccaaccagcacgagaaggacagcggtgtggggcggaccgacgagagcacacgcaac
gacgagagctcggagcaggagaacaacggcgatgacgccacggcgtcctccgacccgctg
gcggggcagaggaagctcacgtgcagccaggacaccctgggcagcggagacctgcccttc
agcagcgagtccttcatctcggccgactgcaccgacgccgactgcctggggatcccggtg
gacgagtgcgagcgcttccgcgagctcctggagctcaagtgccaggtgaagcgcgccgcc
ccctacggcctgtcctaccccggcggcggcctggacgccggcaggagcgagcccgagagc
gtggacaaggagctggagctgctgaacgaggagctgcgcagcatcgagctggagtgcctg
agcatcgtgcgcgcccacaagatgcagcagctgcgcgagcagtgccgcgagccctggatg
ctgcaccacggcggcttccgcaactacaacaccagcatcgacgtgcgcaggcacgagctc
ccggacatcaccgagctcccggagaggtccgacaaggacagctccagcgcctacaacacg
ggcgagagctgccggagcaccccgctcgccttggagatctcgcccgacaactccttgagg
cgagtggccgagggcatcagctgcccggggggcgaaggggccgtggggatcccggaagct
tacgggccgtccccgaagaacctgctggccatcacggaagaccccgaggtgggcacccct
acctacagcccgtcgccgcaggagctggaccccggccagtccctggagaacaaggagagg
agaggcagcgacgggagcaggagccccacgcccagcccgaagccgggcggcgcctacccg
gccacctcgcaccactcgccgtacaggcacgcgcacatcccggcgcacgcccagcactac
cagagctacatgcagctgatccagcagaagtcggccgtggagtacgcgcagagccagatg
agcctggtgagcatgtgcaaggacctggcctccgccggccccgcggagccgccgcgcacc
gagtggaaggtgaagatccgcagcgacggctcgcgctacatcaccaagcggccggtgcgc
gaccgcctgctgcgggagcgcgccctcaagatccgcgaggagcgcagcggggtgaccacg
gacgacgacgcggtgagcgagctgaagatggggcgctactggagcaaggaggagcggaag
cagcacctggtgaaggccaaggagcagaggcggcggcgcgagttcatgctgcagagcagg
ctggattgtctgagggagcagcaggcggccgacgacaggaaggagatgaacatcctcgaa
ctgagccacaaaaagatgatgaagaggaggaacaaaaagatcctcgataactggatgacg
atccaagaactcttaacccacggcacgaagtcaccagacggcactagagtatacaattcg
ttcttgtcggtgactactgtataa
DBGET
integrated database retrieval system
