Lemur catta (Ring-tailed lemur): 123623936
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Entry
123623936 CDS
T08326
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
KO
K06100
symplekin
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
lcat04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123623936 (SYMPK)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
123623936 (SYMPK)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123623936 (SYMPK)
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123623936 (SYMPK)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
123623936 (SYMPK)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
123623936 (SYMPK)
U7-dependent histone pre-mRNA processing factors
123623936 (SYMPK)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
PDS5
Cnd1
INTS7_N
Motif
Other DBs
NCBI-GeneID:
123623936
NCBI-ProteinID:
XP_045387340
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All DBs
Position
19:25961865..25997348
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AA seq
1250 aa
AA seq
DB search
MANSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLRQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAGDIILLLDSDNDGIR
THAIKFVEGLIVTLSPRVADSEIPRRQEHDISLDRIPRDHPYIQYNMLWEEGKAALEQLL
KFMVHPAISSINLTTALGALANIARQRPMFMSEVIQAYETLHANLPPTLAKSQAQITTLL
VDLGTPQAEIARNMPSSKDARKRPRDDSDSTLKKMKLEPNLGEDDEDKDLEPGPSGTSKA
SAQISGQSDTDITAEFLQPLLTPDNVANLVLISMVYLPEAMPASFQAIYTPVESAGTEAQ
IKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEKVVKPESVLIKRRLPAQGQAISVVGS
LSSMSPLEEEAPQAKRRPEPIIPVTQPRLAGAGGRKKIFRLSDVLKPLTDAQVEAMKLGA
VKRILRAEKAVACSGAAQVRIKILACLVTQFDSGLKAEVLSFILEDVRVRLDLAFAWLYQ
EYNAYLAAGASGTLDKYEDCLIRLLSGLQEKPDQKDGIFTKVVLEAPLITESALEVIRKY
CEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDLSSHEKDKVRSQALLFIKRMYEKEQL
REYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAAPWTEETVKQCLYLYLALLPQNHKLI
HELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPELLLLVENCPKGAETLVTRCLHSLTD
KVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEKKEVIQALPKLIKLNPIVVKEVFNRL
LGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMKSIIKATNLCFAERNVYTSEVLAVVM
QQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNILSRLIMKQVWKYPKVWEGFIKCCQRT
KPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVRSFTPHQQAHIPSSIMTILEASGKQE
PEAKEAPAGSLEEDDLEPLVLGPAPAPRPPQDLIGLRLAQEKALKRQLEEEQKLKPGVVG
APSSSSSSPSSSSARPGPPASEEAMDFREEGPECETPAIFISMDDDSGLTEAALLDSSLE
GPLPKEAAAGGLASKEERSPQPLAPAGEDAVKTPSPAAEEAGEAETKGNS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacagcagtggggacagtgtcacccgccggagtgtggcatcacagtttttcact
caagaagaggggccaggcattgatggcatgaccacctcagagagggtggtggatctcctc
aaccaggcagcgctgatcaccaatgactcaaagatcacagtgctcagacaggtccaggag
ctgatcatcaacaaagaccccacactactggacaacttcctggatgagatcatcgctttc
caggcagacaaatcgatcgaagtgcgaaaatttgtcatcggcttcattgaggaggcatgc
aagcgagacattgagttactactgaaactgattgcaaacctcaacatgctcctgagggat
gagaatgtgaacgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtgaagtcgcgggtcatcagcgagctccaggaggcctgctgggacatg
gtgtctgccatggctggggacatcatcctgctgttggactctgacaacgatggcatccgc
acccatgccatcaagtttgtggagggcctcattgtcaccctgtcaccccgcgtggctgac
tcagagataccccgacgccaggagcacgacatcagcttggaccgtatccctcgggaccac
ccctacatccagtacaacatgctgtgggaagagggaaaggcagccctggagcagctgctc
aagttcatggtgcaccccgccatctcctccatcaacctgaccacagcactgggtgccctc
gccaatatcgcccgccagagacccatgttcatgtccgaggtgatccaggcctatgaaacc
ctgcatgccaacctccccccgacgctggccaaatcgcaggcccagatcaccaccctgctg
gtggacctgggcacacctcaggccgagattgcccgcaacatgcccagcagcaaggatgcc
cgcaagcggccccgagatgactcagattccacactcaagaagatgaagctagagcccaac
ctgggggaagacgatgaggacaaggacttggagccaggcccatcgggcacctcgaaggcc
tcagcccagatctcaggccagtcagacacagatatcacagccgagttcttacagcctctg
ctgacaccggacaacgtggccaatctggttctcatcagcatggtgtacctgcctgaggcc
atgcctgcctccttccaagccatctacacgcccgtggagtccgcaggcaccgaagcccag
atcaagcacctggctcggctcatggccacacagatgacggccgcaggactagggccaggc
gtggagcaaaccaagcagtgcaaggaggagcccaaggaggagaaggtggtgaagcccgag
agcgtcctgatcaagcggcgcctgccagcccagggccaggccatctcggtggtgggctcc
ctgagctccatgtcccctctggaggaggaggcgccccaggccaagaggaggccggagccc
atcattcctgtcacccagccccggttggcaggtgctggtgggcgcaagaaaatcttccgt
ctcagcgacgtgctgaagcccctgactgatgcccaggttgaggccatgaagctaggtgct
gtgaagcggatcctgcgggctgagaaggctgtggcctgcagcggggcagcccaggtgcgc
ataaagatcctggcctgcctggtgacgcagttcgactcgggcctaaaggccgaggtcctg
tccttcatcctagaggatgtgcgggtgcgcctggacctggcctttgcctggctctaccag
gagtacaatgcctacctggcagccggggcctcgggcaccctggacaagtatgaggactgc
ctcatccgcctgctgtctggcctgcaggagaaaccggaccagaaggatgggatcttcacc
aaggtggtgttggaggctccgctcatcactgagagtgccctggaggtgattcgcaagtac
tgcgaggacgagagtcgcacctacctgggcatgtccacgcttcgagacctgatctttaag
cgcccgtcccgccagttccagtatctgcacgtcctcctagacctcagctcccatgagaag
gacaaggtgcgttcccaggccttgcttttcatcaaacgcatgtacgaaaaggagcaacta
cgagagtacgtggagaaatttgccctcaactacctgcagctcttggtccaccccaaccca
ccgtctgtactgttcggagccgacaaggacacagaggtggcagcgccctggaccgaggag
acggtgaagcagtgtctgtacctctacctggcccttctgcctcagaaccacaagctgatc
cacgagctggcggccgtgtacactgaggccattgctgacatcaagcggacggtgctgaga
gtgatcgagcagccgatccgaggaatgggcatgaactccccagagctgctgctcctggtg
gaaaactgtcccaagggagcagaaacgctggtcacccgatgtctacacagcctcacagac
aaagtcccgccgtccccagagctggtgaagcgggtccgcgatctctaccacaagcggcta
ccagacgtccgcttcctcatccccgtgctcaatgggctggagaagaaagaggtgatccag
gcgctgcctaaactcatcaagctcaaccccatcgtggtgaaggaggtcttcaaccgcctg
ctgggcacccagcacggtgaagggaactcggccttgtcccccctgaaccccggagagctc
ctgatcgcattacacaacattgactcagtgaagtgtgacatgaagtccatcatcaaagcc
accaacctgtgctttgcggagcggaacgtgtacacgtcggaggtgctggccgtggtgatg
cagcagctgatggagcagagccccctgcccatgctgctcatgaggaccgtcatccagtcc
ctgaccatgtacccccgcctggggggcttcgtcatgaacatcctttcccgcctcatcatg
aagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaagtgctgccagcgcacc
aagccccagagcttccaggtcatcctgcagctgccgccccagcagctgggagccgtcttt
gacaagtgccccgagctccgggagcccctgctggcccatgtccgctccttcacccctcac
cagcaagcacacatccccagctccatcatgaccatcttggaggccagcggcaagcaggag
ccggaggccaaggaggcacctgcagggtccctggaagaggacgacctggagcccctggtc
ctgggtccggccccagcgccccggccccctcaggacctcatcggcctgcggctggcccag
gaaaaggccttaaagcggcagctggaggaggaacagaagctgaagcccggagtagtggga
gccccttcctcttcctcctcgtctccctcctcttcttctgcccggcccggccccccagcg
tcggaggaagccatggatttccgggaggaggggcctgagtgcgagaccccggccatcttc
atcagcatggatgacgactcggggctgacggaggccgcgctcctggactccagcctggag
gggcccctccctaaggaggcggcggcgggcgggttggcctcaaaggaagagcggagcccc
cagcccctcgcccctgccggagaagacgccgtgaagacccccagcccggccgccgaggaa
gcgggggaagccgagaccaaggggaacagctga
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