Lemur catta (Ring-tailed lemur): 123624042
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Entry
123624042 CDS
T08326
Symbol
CIC
Name
(RefSeq) LOW QUALITY PROTEIN: protein capicua homolog
KO
K20225
capicua transcriptional repressor
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
123624042 (CIC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123624042 (CIC)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123624042 (CIC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4819
HMG_box
HMG_box_2
Zf_WRKY19
Motif
Other DBs
NCBI-GeneID:
123624042
NCBI-ProteinID:
XP_045387532
LinkDB
All DBs
Position
19:complement(27902469..27928691)
Genome browser
AA seq
2519 aa
AA seq
DB search
MKPMKKHSACTGLSGPGSGSKSPPATRAKALRRRGAGEGDKPEEDEDEVQQQQQQPGPEE
AEEAEEEEAEQGPGAEGPPPELHPGDPAPGPAEDPKGDLEAGRWEPSLSRKTATFKSRAP
KKKYVEEHGAGGGGMAGAPEERVRTPEEASALGVPPRPPTSTRSSSTDTASEHSADLEDE
PAEACGPGPWPSSGTSGGYDLRQLRSQRVLARRGDGLFLPAVVRQVRRSQDLGVQFPGDR
ALTFYEGVPGGGVDVVLDATPPPGALVVGTAVCTCVEPGVAAYREGVVVEVATKPAAYKI
RLSPGPSSQPGPPGTLPQPPQPLHREPEEAVWVARSSLRLLRPPWEPEALLRKPPTGPEE
EQAESGATLPPCPAALDPKQPEDAEVSKISFGGNLGAHCEEGEEKHPPALGTPALLPLPP
PQLLSPPPKSPAFAGPGRPGEQPSPCQEGSQGGSRSSSVASLDKGAAPAARARTPLTAAQ
QKYKKGDVVCTPNGIRKKFNGKQWRRLCSRDGCMKESQRRGYCSRHLSMRTKEMEGLADS
GPGGAGRPAGVAAREGSTEFDWGDETSRDSEASSVAARGDSRPRLVAPADLSRFEFDECE
AAVMLVSLGSSRSGTPSFSPVSTQSPFSPAPSPSPSPLFGFRPANFSPINASPVIQRTAV
RSRHLSASTPKAGVLTPPDLGAHPPPPAPRERHSSGILPTFQTNLTFTVPISPGRRKTEL
LPHPGALGAPGAGGGGAAPDFPKSDSLDSGVDSVSHTPTPSTPAGFRAVSPAVPFSRSRQ
PSPLLLLPPPAGLTSDPGPSVRRVPAVQRDSPVIVRNPDVPLPSKFPGEVGTSSEARAGG
PGRGCRETPVPPGVASGKPGLPPPLPAPVPITVPPAAPTAVAQPMPTFGLASSPFQPVAF
HPSPAALLPVLVPSSYTSHPAPKKEVIMGRPGTVWTNVEPRSVAVFPWHSLVPFLAPSQP
DPSVQPSEAQQPASHPVASNQSKEPAESAAVAHEQPPGGTGSADPGRPPGATCPESPGPG
PPHALGVVEPGKGPPPTTEEEAPGPPGEPRLDSETESDHDDAFLSIMSPEIQLPLPPGKR
RTQSLSALPKERDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRT
VSKILGEWWYALGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLA
GGHKETRERSMSETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHAVGGPGS
ARPRAFSHSGVHSLDGGEVDTQALQELTQMVSGPTSYSGPKPSTQYGAPGPFAAPSEGGA
LAASGRPPLLPTRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKE
RVTDSESGDSSGEDPEGNKGFGRKVFSPVIRSSFTHCRPPLDPEPPGPPDPPAAFSKGYG
PAPSSSSSSPASSASAATSFSLGSGTFKAQESGQGSTVGPLRPPPPGAGGPATPSKATRF
LPTDPATFRRKRPESVGGLEPPGPSVIAAPPSGGGSILQTLVLPPNKEEQEGSGARVPSA
PAPSLAYGAPAAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSGRAEASPNDTAGARTE
MGTGSRVPGGSPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPATVTNLLVGTPGY
GAPAPPAVQFIAQGAPGSGTTAGSGAGAGNGPNGPVPLGILQPGALGKAGGITQVQYILP
TLPQQLQVAPAPAPAPGTKAAAPSGPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQ
SVPSAPPPKAQSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFS
VPVQNGAQPPSKIIQLTPVPVSTPSGLVPPLSPATLPGPTSQPQKVLLPSSTRITYVQSA
GGHALPLGTSPASSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQAPLLAPGQV
GVSPVPSPQLPPACAAPGGPVITAFYPGSPAPSSSAPLAQPSQAPPSLVYTVATSTTPPA
ATILPKGPPAPATATPAPTSPFPSATGSMTYSLVAPKAQRPSPKAPQKVKAAIASIPVGS
FEAGASGRPGPASRQPLEPGPVREPTAPESELEGQPTPPAPPPPPETWTPTARSSPPPPP
PAEERTSAKGPETMASKFPSSSSDWRVPGQGLESRGEPPTPPSPAPAPATAPGGSSGSSE
GSSGRAAGDTPERKEAASTGKKVKVRPPPLKKTFDSVDKVLSEVDFEERFAELPEFRPEE
VLPSPTLQSLATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKS
AKCEGDIFTFDRTGTEAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQA
TAAFQARYADIFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAASAP
TPSPAGGPDPTSPGSDSGTAQAAPPLPPPPESGPGQPGWEGAPQPSPPPPGPSTAVTGR
NT seq
7560 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatgaagaagcactcagcatgcaccggcctttcaggtcctggcagcggtagc
aagtccccaccagccacgagggccaaggctctgagacggcgaggggctggggagggtgac
aagccagaggaggacgaagatgaggtccagcagcagcagcagcagcctgggccagaagaa
gcagaggaggctgaggaggaggaggctgagcagggccctggggctgaggggccgcccccg
gagctgcaccctggtgacccagccccaggcccagccgaagaccccaagggagacttggag
gcaggccgatgggagccttcactcagccgaaagacagccacgttcaagtctcgagcaccc
aagaagaagtatgtggaggagcatggggctggtggcggtggcatggctggggcccctgaa
gaacgggtgaggacccctgaggaggccagtgccctgggtgtacctccacggccacccact
tctacccgctcttcctccaccgacacagccagtgagcactcagcagacctggaggacgag
ccagctgaggcttgtggtccaggcccctggccctccagtggcaccagtggtggctatgac
ctacggcagctgcggtcccagcgggtgctggctcggcgtggtgatggactcttcctgcca
gctgtagtgcgccaggtgcgccgaagccaggacctgggtgtgcagttccctggtgaccgg
gccctgactttctatgagggggtgccaggtggtggtgtggatgtggttttggatgccaca
ccaccgcctggcgcgctggtggtaggcacagccgtctgtacctgtgtggagcccggtgtg
gctgcctaccgggaaggtgtggtggtggaggtggccaccaagccagctgcctacaagatc
cgtctcagccctggccccagctcccagccaggcccaccgggcaccctaccacagccccca
cagccactgcaccgtgagcccgaggaggccgtgtgggtggcccgctccagtctgcgcctg
ctgcggcccccctgggaacctgaggccctgctgaggaagccccccacaggccctgaggaa
gaacaggctgagtctggggccaccctgccaccctgccctgctgccctagacccgaagcag
cccgaggatgctgaggtttccaagatcagctttggtggcaatctgggcgctcactgcgag
gagggtgaggagaagcacccaccagccctgggcaccccagccctgctcccgctgccccca
ccccagctcctgtcgccaccacccaagtctccagcctttgccggtcctggccgccctggt
gagcagccctcgccctgccaggaagggagccagggcggcagccgtagcagcagtgtggcc
tcgctggataagggggccgcaccagcagcccgggcccgcacacctttgacagccgcccag
cagaagtacaagaaaggtgatgtggtctgcacacccaatggaatccgaaagaagttcaac
ggcaagcagtggcgacggctgtgctcacgagatgggtgcatgaaggagtcacagcggcga
ggctactgctcacgccacctgtccatgcgaaccaaagagatggagggcctggcagacagt
gggcctggtggggcggggcggccagccggcgtggcagcccgtgagggcagcaccgagttc
gactggggtgatgagacatctcgggacagtgaggccagcagcgtggcagcccgtggagac
tctcggccacgcctcgtggcccctgctgacttgtcacgctttgagtttgacgaatgtgag
gcggccgtgatgttggtgtcattgggcagctcacgctcgggcacaccctccttctcgcct
gtctctacgcagtcgcccttctcgccagccccgtcaccctcaccctcacctctcttcggc
ttccgccctgccaatttcagtcccatcaatgcctcgccggtcatccagcgcacagctgtt
cgcagtcgccacctgagcgccagcacgcctaaggcaggcgtgctgactccaccagacctg
ggtgcccacccaccaccacctgccccccgagagcgccattcctctggcatcctacccacc
ttccagaccaacctgacctttaccgtgcccatcagccctgggcggcggaagacagagctg
ttgccgcacccaggggccttaggggcccctggcgcagggggtggaggagccgccccagac
ttccccaagagcgacagtttagactctggtgtggactcagtgtcccacacacctacaccc
tctacaccggctggcttccgggctgtgtcacctgccgtgcccttctctcgctcccgccag
ccctcgccgttgctgctgttgcctccacctgctggcctgacctcagatccagggccctcc
gtgcgcagggtgcctgctgtgcagcgggactcacccgtcattgtccgcaaccctgatgtg
ccactgccctccaaattccctggggaggtgggcacttccagtgaggcacgggctggcgga
cctgggcggggctgccgtgagaccccggtgccccccggggtggccagtgggaagcctggc
ctgcccccacctctgccggcccccgtgcccatcactgtgcctccagccgcgccgactgct
gtggcccagccgatgcccacctttggtctggcttcttcacccttccagcctgtggccttc
cacccctcacctgctgccctattgcctgtcctggtgcccagcagctacaccagccatcct
gcccccaagaaggaagtcatcatgggccggcctggaacagtgtggacgaatgtggaacct
cgctctgtggccgtgttcccctggcactccctagtccccttcctggcacccagccagcct
gacccctctgtgcagccgagtgaagctcagcaacctgccagccacccagtggcctccaac
cagagcaaagaacctgctgaatcggcagctgttgctcatgaacagccaccaggtgggaca
gggagtgctgaccctgggcgaccccctggagccacatgccctgagagcccagggcccgga
cccccacatgctttgggggtggtggaacctggtaagggtccccctcccaccactgaggag
gaagcccctggccccccaggagaaccccggttggacagcgagacagagagtgaccacgat
gatgccttcctctccatcatgtctcctgagatccagttgcctctgccacctggaaaacgg
cggacccagtcccttagtgccctgcccaaggaacgggactcatcttccgagaaggatgga
cgcagccccaacaagcgggagaaggaccatatccgacggcccatgaatgccttcatgatc
ttcagcaagcggcaccgggccctggtccaccagcgtcaccccaaccaggacaaccggacc
gtcagcaagatcctgggcgagtggtggtacgccctggggcccaaggagaagcagaagtac
cacgacctggccttccaggtgaaggaggcccacttcaaggcccacccagattggaagtgg
tgcaacaaggaccgaaagaagtccagctcggaggccaagcccacgagcctggggctggca
ggagggcacaaggaaacacgggagcggagcatgtcggagacgggcactgccgctgcccct
ggggtgtcctctgagctcctgtccgtcgcggcccagacactcttgagctcagacaccaag
gctccaggaagcggctcctgtggggcagaacggctgcatgcagttgggggacctggctca
gcccggccccgagccttctcccacagtggggtacacagcctggatggcggcgaagtagac
acccaggcactacaggaactgacgcagatggtgtctggccctacatcgtactccggccca
aagccttccacccagtatggagctccaggcccttttgcagcccccagtgagggaggtgcg
ttggcagccagtgggcggcccccactgttgcccacccgagcctctcgttcccagcgcgca
gccagtgaggacatgaccagtgacgaggaacgcatggtcatctgtgaggaggaaggggat
gatgatgtcattgctgacgatggcttcagcaccactgacattgatctcaagtgcaaggag
cgagtgaccgacagcgagagtggagacagctctggggaggacccagagggcaacaagggc
tttggtcggaaggtgttttcacccgtgatccgttcttcctttacccactgccgtccgccg
ttggaccctgagcccccagggcctccggatccacctgcagccttcagtaaaggctatggt
cccgccccatcctcctcttcgtcttcgcctgcctcctcagcctcggcagcaacgtccttc
tcactgggctcaggaaccttcaaggcccaggagtctggtcagggcagcacagtgggccca
ctacggcccccaccccctggggctgggggcccagcaacaccttccaaggctacccgattc
ctcccaacggatcctgccaccttccggcgcaagagacctgaaagtgtggggggtctggag
ccgccaggcccctcggtcattgcagcgcctcccagtggaggaggaagcatcctgcagaca
ctggtcctgcccccaaacaaggaggagcaggagggcagtggagccagagtgccctcggcc
ccggccccatcactggcctatggggccccggcagctcccttgtcccgccctgctgccacc
atggtcaccaacgtggtgcggcctgtcagcagcactcctgtgcccatcgcctctaagccc
tttcccacctctggccgggctgaggcatctccaaatgacacggcaggtgccaggactgaa
atgggcactgggtcccgggtgcctgggggttccccgcttggcgtcagcttagtgtattcg
gacaagaagtcggcagcagccacctcaccagccccacacttggtggctgggcccctactg
ggcaccgtagggaaagcgcctgccactgtcactaacctactggtgggcaccccaggctat
ggggcccctgcaccccctgctgtccagtttattgcccagggggcccctggcagcgggacc
actgcaggctcaggagcaggtgctgggaatggccccaatgggccagtacccctgggcatc
ctgcagccaggtgccctgggcaaggctgggggaatcacccaggtgcagtacatcttgccc
acgctgccccagcagcttcaggtggcacctgccccagcaccggcccctgggaccaaagca
gcggctcccagcggccctgcacccaccaccagcatccgtttcaccctcccgccgggcacc
tccaccaacggcaaggtcctggccgctactgcacccactcctggcatccctatcctgcag
tccgtaccctccgccccgccccctaaagcccagtcagtttctcccgtgcaggccccacct
ccgggtggctcagcccagctgctgcctgggaaggtactagtgcccctggccgcccctagc
atgtcagtgcggggtggaggggctggccagccgctgcccctggtgagcccgcccttctca
gtacctgtacagaatggtgcccagccacccagcaagatcatccagctgactccagtgccc
gtgagcacacccagcggcctggtgccgcccctgagcccggccacgcttcctggacccacc
tcgcagccccagaaagtcctgctgccctcctccaccagaatcacctatgtgcagtcagcg
ggcgggcacgcgctgcccctgggcaccagccctgcgtctagccaggctggaacagtcacc
tcgtacgggcccacgagctctgtagctctaggcttcacctcgctggggcccagtggcccc
gccttcgttcagcccctgctctcagcaggccaagccccgctgctggcccctggccaagtg
ggcgtatcgcctgtgcccagcccccagctgccacctgcctgcgcagcccctggagggccc
gtcataacggcattttatcctggcagccctgcaccctcctcctcagcacccctggcccag
ccatcccaggctcctccaagcctggtctacactgtggccaccagcaccaccccacctgct
gccaccattctgcccaagggcccaccggcccctgccactgccaccccagcccccactagc
cctttccccagtgccacaggctccatgacctacagcttagtggcccccaaggcccagcgg
cccagcccaaaggccccccagaaagtgaaggcggccatcgccagcattcccgtgggttcc
tttgaggcaggtgcctccgggcgccctggccccgcatcccggcagcctctggagcctggc
ccagtccgcgagccaactgccccggagtctgagcttgaggggcagcccacaccaccagct
cctccaccacccccagagacctggactcccacagccaggagcagccccccaccaccccca
cctgctgaggagcggaccagcgccaagggccctgaaaccatggccagcaaattccccagc
tcatcttcagattggcgtgtccctgggcagggcctggagagtcgtggggagcctcccacc
cctcccagcccggccccagctccagccacagcccctggtggcagcagcggcagcagcgag
ggcagcagtgggagggcggccggggacactcctgagcgcaaagaggcagctagtaccggc
aagaaggtgaaggtgcggcccccgcccctgaagaagacctttgactctgtggacaaggtc
ctgtcagaggtagacttcgaagagcgctttgctgagctgcctgagtttcggcctgaggag
gtgctgccctccccgaccctgcagtctctggccacctcaccccgggctattctgggctct
taccgcaagaagaggaagaactctactgacctggactcggcgcccgaggaccccacctcg
cctaagcgcaagatgaggagacgctccagctgcagctcagagcccaacacccccaagagt
gccaagtgcgagggagacatctttacctttgaccgtacaggtacagaagccgaggatgtg
ctcggggagctggagtatgagaaagtgccatactcgtcactgcggcgtaccctggaccag
cgccgggccctggtcatgcagctcttccaggaccacggcttcttcccatcagcccaggcc
accgcagccttccaggcccgctatgcagatatcttcccctccaaggtttgtctacagttg
aagatacgagaagtgcgccagaagatcatgcaggcagccacgcccacggagcagcctcct
ggagctgaggcccctctccctggaccgccccccactggcactgctgctgcctctgccccg
actcccagccctgctgggggccccgaccccacctcacctggctcggactctggcacggcc
caggctgccccgccactgcctccacccccagagtcagggcccggacagcctggctgggag
ggggccccccagccctctcccccacctccaggcccctctacagctgtcacaggcaggtga
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integrated database retrieval system
