Lemur catta (Ring-tailed lemur): 123624311
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Entry
123624311 CDS
T08326
Name
(RefSeq) spectrin beta chain, non-erythrocytic 4
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04517
IgSF CAM signaling
lcat04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
123624311
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
123624311
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcat04812
]
123624311
Cytoskeleton proteins [BR:
lcat04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
123624311
Intermediate filaments
Intermediate filament-binding proteins
123624311
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
RASSF_helical
Helical_needle
Rv3651-like_N
FlgK_D1
Motif
Other DBs
NCBI-GeneID:
123624311
NCBI-ProteinID:
XP_045387920
LinkDB
All DBs
Position
19:complement(29193602..29255893)
Genome browser
AA seq
1999 aa
AA seq
DB search
MAQVPGEVDNMEGLPAPNNNNLAARWDSPDRGWEREQPASSTAAASLFECSRIKALADER
EAVQKKTFTKWVNSHLARVGCHIADLYADLRDGFVLTRLLEVLSGEQLPRPTRGRMRIHS
LENVDKALQFLKEQRVHLENVGSHDIVDGNHRLTLGLVWTIILRFQIQVIKIETEDNRET
RSAKDALLLWCQMKTAGYPEVNIQNFTTSWRDGLAFNALIHRHRPDLVDFSKLTKSNANY
NLQRAFRTAEQHLGLARLLDPEDVNMEAPDEKSIITYVVSFYHYFSKMKALAVEGKRIGK
VLDQVLEVGKIIERYEELAAELLAWIHRTVGLISNQKFANSLSGVQQQLQAFTAYCTLEK
PVKFQEKGNLEVLLFSIQSKLRACNRRLFVPREGCGIWDIDKAWGQLEKAEHEREAALRA
ELIRQEKLELLAQRFDHKVAMRESWLNENQRLVSQDNFGYELPAVEAAMKKHEAIEADIA
AYEERVQGVAELAQALAAEGYYDARRVAAQRDSVLRQWALLTGLVGARRTRLEQNLALQK
VFQEMVYMVDWMEEMQAQLLSRECGQHLVEADDLLQKHGLLEADIAAQSERVEALNAAAL
RFSQLQGYQPCDPQVICNRVNHVHGCLAELQEQAARRRAELEASRSLWALLQELEEAESW
ARDKERLLEAAGGGGGAAGAAGAAGGAHDLSSTARLLAQHKILQGELGGRRALLQQALRR
GEELAAAGGSVGLGAETVHLAGLAERVSSARRRWQRLEEAAVRRERRLQEARALHQFGAD
LDGLLDWLRDAYRLAAAGDFGHDEASSRRLARQHRALTGEVEAHRGPVGSLRRQLATLGG
ASGAGPLVVALQVRVVEAEQLFAEVTEVAALRRQWLRDALAVYRMFGEVHACELWIGEKE
QWLLSMRVPDSLDDVEVVQHRFESLDQEMNSLMGRVLDVNHTVQELVEGGHPSSDEVRSC
QDHLNSRWNRIVELVEQRKEEVSAVLLVENHVLEVAEVRAQVREKRRAVESAPRAGGALQ
WRLSGLEAALQALEPRQAALLEEAALLAARFPTQAARLHQGAEQLGTEWGGLASSAQACG
EAVAAAGRLQRFLHDLDAFLDWLVRAQEAAGGSEGPLPSSLEEADALLARHAALKEEVDQ
REEDYARIVAASEALLANDGADLGPGLALDEWLPHLELGWHKLLGLWEARREALVQAHVY
QLFLRDLRQALAVLRNQEMALSSAELPSTVESVEEALKRHRDFLTTMELNQQKMQVAVQA
AEGLLRQGNVYGEQAQEAVTRLLEKSQENQLRAHQWLQKLHDQLELQHFLRDCHELDGWI
HEKMLMARDGTREDSHKLHKRWLRHQAFMAELAQNKEWLEKIEREGQQLMQEKPELAASV
RKKLGEIRQCWAELESTTQAKARQLFEASKADQLVQSFAELDKKLLHMESQLQDVDPGGD
LATVNSQLKKLQSMESQVEEWYREVGELQAQTAALPLEPASKELVGERQNAVGERLVRLL
EPLQERRRLLLASKELHQVAHDIDDELVWVQERLPLAMQTERGSGLQAVQQHIKKNQGLR
REIQAHGPRLEEVLERAGALASLRSPEAEAVRCGLEQLQGAWAGLREAAERRQQALDAAF
QVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQLLKKHLQLEQGVENYEESIAQLS
RQCRALLEMGHPDSEQISRRQSQVDRLYVALKELGEERRVGLEQQYWLYQLSRQVDELEH
WIAEKEVVAGSPELGQDFEHVSVLQEKFSEFANETGTAGRERLAAVNQMVDELIECGHTA
AATMAEWKDGLNEAWAELLELMGTRAQLLAASRELHKFFSDARELQGQIEEKRRRLPRLT
APPEPRPSASSMQRTLRAFEHDLQLLVSQVRQLQEGAAQLRTVYAGEHAEAIASREQEVL
QGWKELLAACEDARLHVSSTADALRFHSQARDLLSWMDGIAGQIGAADKPRCPSSLLGLP
TCLWQPPLATPSPSTIPFP
NT seq
6000 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggtaccaggggaagtggacaacatggagggcctgcctgcccctaacaacaac
aaccttgccgcccgctgggacagtccagaccggggctgggagagggagcagccagcctcc
tccaccgcagccgcctcactctttgagtgctcccggatcaaggccttggcagatgagcgc
gaggctgtgcagaagaaaaccttcaccaagtgggtgaactcgcacctcgcccgcgtgggc
tgccacatcgcggacctctatgcggacctccgggacggcttcgtgctcacgcggctcctg
gaagtgctgtccggggagcagttgccgaggcccacgcgcggccgcatgcggatccactcg
ctggagaacgtggacaaggcgctgcagttcctgaaggagcagcgcgtgcacctggagaac
gtgggatcgcatgacatcgtggatggaaaccaccggctgacgctggggctggtctggacc
ataatcctgcgcttccagattcaagtcatcaaaattgaaactgaggacaacagagagacg
cgctcagccaaggatgctctgctcttatggtgtcagatgaagacagctggttaccccgag
gtaaacattcagaatttcaccaccagctggcgggatggcttggccttcaatgccctcatt
caccggcacaggcctgatctcgtggacttcagcaaactcaccaagtccaacgccaactac
aacctgcagagagccttccgcacagctgaacagcacctggggctggcgcgtctgctggac
cctgaagatgtgaacatggaggctccagatgagaagtccatcatcacctatgtggtctct
ttctaccactatttctccaagatgaaggctctggctgtggaggggaagcgcattgggaag
gtcctggaccaggtgttggaggtgggaaagatcatagagcgctatgaggagctggcggct
gagctgctggcctggatccaccgcaccgtgggcctcatcagcaaccagaagtttgccaac
tcattaagtggggtgcagcagcagcttcaggctttcacggcctattgcacactggagaag
cccgtcaagtttcaggagaaggggaacctggaggtgctgcttttcagcatccaaagcaaa
ctccgtgcctgcaaccgtcgcctcttcgtgcctcgggagggctgtggcatctgggatatt
gataaggcatggggccagctggagaaggcagagcatgagcgggaggctgccctaagggct
gagctgatccgacaagagaaactggaactactggcccagaggtttgaccacaaggtggct
atgagggagagctggctgaatgagaaccagcgcctggtctcccaggacaactttgggtat
gagctgccagcagtggaggcagccatgaagaaacacgaagctattgaggcagacattgca
gcctacgaggagcgggtacagggtgttgcagagctggcccaggcattggcggctgaaggc
tactatgatgcccggcgggtggcggcccagcgtgacagtgtcctgcgccagtgggccctg
ctgactgggctggtgggtgctcggcggacgcggcttgagcagaacctggccctgcagaag
gtcttccaggagatggtgtacatggtggactggatggaggagatgcaggcccagctgctg
tcccgggagtgtgggcagcacctggtggaggcagacgacctgctgcagaagcatggactg
ctggaggcggacatcgcggcccagagcgagcgggtggaggcactcaacgctgccgctttg
cgtttctcccagctgcagggctaccagccctgcgacccgcaggtcatctgcaaccgggtg
aaccacgtgcacggctgtctggcggagttgcaggagcaggcggcgcggcggcgcgcggag
ctggaggcctcgcggagcctgtgggcgctgctgcaggagctggaggaggccgaaagctgg
gcacgagacaaggagcgcctcctggaggctgcgggcggcggcggcggcgcggcgggcgcg
gcgggcgcggcgggtggcgctcacgacctgtccagcaccgcgcgcctactggctcagcac
aagatcctgcagggcgagctgggcgggcggcgggcgctgctgcagcaggccctgcggcgc
ggcgaggagctggctgcggcgggcggatccgtgggcctgggcgccgagactgtgcacctg
gcgggcctggcggagcgcgtctctagcgcccggcgccgctggcagcggctggaagaggcg
gcggtgcggcgcgagcggcggctgcaggaggcgcgggcgctgcaccagttcggcgctgac
ctcgacgggctcctggactggcttcgcgacgcttatcgcctggcagccgccggcgacttc
ggccacgacgaagcgtccagccgccgcctggctcgccagcaccgcgcgctcacgggggag
gtggaggcccatcgcgggcccgtgggcagcctgcggcgccagctggcgacactggggggt
gccagtggcgccgggccgctggtggtggcgctgcaggtgcgcgtggtggaggctgagcag
ttgttcgccgaggtgaccgaagtggccgccctgcgacgccagtggctgagggacgcgctc
gctgtatatcgcatgttcggcgaggtgcacgcgtgcgagctgtggatcggggagaaggag
caatggttgctctccatgcgcgtgcccgattcactggacgacgtcgaggtggtgcagcat
cgattcgagagcctggaccaggagatgaacagtctgatgggccgcgttctggatgtgaac
cacacagtgcaggagctggtggaaggaggccaccccagctcagatgaggtgcgctcctgc
caggaccacctcaacagcaggtggaaccgcatagtggagctggtggaacagcgcaaagag
gaagtgagcgcggtgctgctggtggagaaccatgtcctggaggtggccgaggtgcgcgcc
caggtgcgcgagaagcggcgagccgtggagagcgcaccccgcgcagggggcgccctgcag
tggcgccttagcggcctagaggccgctctgcaagcgctcgagccacgccaggcggccctt
ctggaggaggcggccctgctggctgcgcgcttcccgacgcaggcggcgcggctgcaccag
ggcgcagagcagctgggcaccgagtggggcgggctagccagctcggctcaggcctgcggt
gaggcggtggcggcggctgggcgcctacagcgcttcttgcatgacctggacgctttcctg
gactggctcgtgcgcgcccaggaggcggcgggtggcagcgaggggcccctgcccagcagc
ctagaagaggcggacgcgctgctggcgcgccacgctgcgctcaaggaggaggtggaccag
cgcgaggaggactatgcgcgcatcgtggcggccagcgaggcgctgctggcgaacgacggc
gcggacctaggcccgggcctggcgctggacgagtggctgccccacctcgagcttggctgg
cacaaactgctcggcttgtgggaggcgcgcagggaggcgctggtgcaggcccatgtctac
cagctcttcctgcgcgacctacgccaggcactcgccgtgctgcgtaaccaggagatggcg
ctatcgagcgcggagctcccaagcacagtggagtccgtggaagaggcgctgaaacggcac
cgggattttctcaccacgatggagctgaaccagcaaaagatgcaggtggccgtgcaggct
gcggagggcctgctgaggcagggcaatgtctacggggagcaggcccaggaggccgtgacc
cggctgctggagaagagccaagaaaaccagttacgggcccaccagtggctgcagaaacta
cacgaccagcttgagctgcagcacttcctccgagactgccacgagctggatggctggatc
cacgagaagatgctgatggcgagggatggcacgcgggaagacagccacaagctgcataag
agatggctccggcaccaggcattcatggccgagctggctcagaataaggagtggctggag
aagatcgagagggagggccagcaactgatgcaggagaagccagagctggccgcctctgtg
aggaagaagttgggcgagatccggcagtgctgggcggagctggagagtaccacccaggcc
aaggcgcggcagctctttgaggccagcaaggctgaccagctagtgcagagcttcgctgag
ctggacaagaagctccttcacatggaaagccagctgcaagatgtggaccctggcggggac
ctggccaccgtcaacagccaactgaagaagctgcagtccatggagtcccaggtggaggag
tggtaccgcgaggtgggagagttgcaggcgcagacggcggcgctgccgctggaacccgcg
agcaaggagctggtgggcgagcggcagaacgcggtgggcgagcgcctggtgcgcctgctc
gagcccctgcaggagcgccgccgcttgctgctggcctccaaggagctgcaccaggtggcg
cacgacatagacgacgagctggtgtgggttcaggaacggctgccactggccatgcagaca
gagcgaggcagcggtttgcaggccgtccagcagcacatcaaaaagaaccagggcctgcgg
cgggagatccaggcgcacgggcctcgcctggaggaggtgctggagcgcgcgggcgcgctg
gcgtcgctgcgcagccccgaggcggaggccgtgcgctgcggcctggagcagctgcagggc
gcctgggccggcctgcgggaggcggcggagcggcggcagcaggcgctggacgccgccttc
caggtggagcagtactacttcgacgtggccgaggtggaggcgtggctgggcgagcaggag
ctgctcatgatgagtgaggacaagggcaaggacgaacagagcaccctgcagctgctcaag
aaacatctgcagctggagcagggcgtggagaactacgaggaaagcatcgcgcagctgtcg
cgccaatgccgggcgctgctggagatggggcacccggacagcgagcagatcagccggcgg
cagtcgcaggtggaccgcctgtacgtggcgctcaaggagcttggcgaggagcgcagggtg
gggctggagcagcagtactggctgtaccagctcagccgccaggtggacgagctcgagcac
tggattgccgagaaggaggtggtggccggttcccctgagctcggccaggacttcgagcac
gtctcggtgctgcaggagaaattctcagagtttgccaatgagactggcacggcaggccgg
gagcggctggcagctgtgaaccagatggtggatgagctgattgagtgtggccatacggca
gcggccaccatggccgaatggaaggacggcctgaacgaggcctgggcggagctgctcgag
ctcatgggcacacgggcccagctgctggccgcctctcgagagctgcacaagttcttcagc
gacgcccgagagcttcagggacagatcgaggagaagcggaggcggctgccccgcctgacg
gccccaccggagccgagacccagtgccagctccatgcagaggaccctgcgagcctttgag
catgacctgcagctcctcgtgtcccaggtgcggcagctgcaggaaggggcagcccagctg
cggacggtgtacgcgggcgaacacgccgaggccatcgccagccgggagcaggaggtgctg
cagggctggaaggagctgctggcagcctgcgaggacgcccgcctgcacgtcagctccacg
gccgatgccctgcgcttccacagccaagcccgtgacctgctctcctggatggatggtatc
gccggccagattggggcagctgacaagcccaggtgcccctcatccctcctcgggcttcct
acctgtctctggcagcctcccttggccacccccagcccatcaacaatccccttcccatga
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