Lemur catta (Ring-tailed lemur): 123624340
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Entry
123624340 CDS
T08326
Symbol
SUPT5H
Name
(RefSeq) transcription elongation factor SPT5
KO
K15172
transcription elongation factor SPT5
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
123624340 (SUPT5H)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lcat03021
]
123624340 (SUPT5H)
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123624340 (SUPT5H)
Transcription machinery [BR:
lcat03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
123624340 (SUPT5H)
RNA polymerase I system
123624340 (SUPT5H)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
123624340 (SUPT5H)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KOW
KOW4_SPT5
KOW5_SPT5
KOW2_Spt5
KOW7_SPT5
Spt5-NGN
KOW6_SPT5
KOWx_SPT5
Spt5_N
KOW1_SPT5
GPKOW_C
DUF3912
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
123624340
NCBI-ProteinID:
XP_045387985
LinkDB
All DBs
Position
19:complement(29739150..29767045)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEEQRSAAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMHGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLYRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNSTMG
GFSPMSPRISSPMHPSAGGQCGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtccgacagcgaggatagcaacttctccgaggaggaggacagcgagcgcagcagtgat
ggcgaggaggccgaggtagaggaagagcagcggagtgcagcgggcagtgagaaggaggaa
gagcccgaggaagaagaggaggaggaagaggaggaagaatatgatgaagaagaggaggag
gaagatgatgaccggcctcccaagaaaccccgccatggtggcttcattttggatgaggct
gatgtggatgatgagtatgaggacgaggaccagtgggaggatggagcagaggacatccta
gagaaagaagagattgaagcttccaatattgacaatgttgtcctggatgaagaccgctct
ggggctcgccgcctacaaaacctctggagggaccagcgagaagaagaactgggcgagtat
tacatgaagaaatatgccaagtcgtctgtgggcgagacggtatacggaggatctgatgag
ctctcggatgacatcacccagcagcagctgctcccaggagtcaaggatcccaacctgtgg
actgtcaagtgtaagattggggaggaacgggccacagccatttccctgatgcgcaagttc
attgcctaccagttcacagacacacccctgcagattaagtcagtagtggcaccagagcat
gtgaagggctacatctacgtggaggcctacaagcagacccacgtgaagcaggccattgag
ggtgtgggcaacctgcggcttggctactggaaccagcagatggtgcccatcaaggagatg
acagacgtgctcaaagtggtgaaggaggtggccaacctgaaaccaaagtcctgggtccgc
ctcaagcggggcatttacaaggatgacatcgctcaggtggactacgtggagcccagccag
aacaccatctccttgaagatgatcccgcgcatcgactatgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacaaaggctgttt
gacgctgagaagatcaggtccctggggggtgatgttgcctctgatggtgacttcctcatc
ttcgaggggaaccgttacagccggaagggctttctgttcaagagcttcgccatgtctgct
gtgatcacggagggtgtgaagcccacgctctcggagctggagaagtttgaggaccagcca
gagggcatcgacctggaggtggtgactgagagcacagggaaggagcgggagcacaacttc
caacctggggacaatgtggaggtctgtgagggtgagctcatcaacctgcagggcaagatc
ctcagcgtggacggcaacaagatcaccatcatgcccaagcatgaggacctcaaggacatg
ctggagttcccggcccaggaacttcggaaatacttcaagatgggggaccatgtgaaggtg
attgccggccgatttgaaggcgacacgggcctcattgtgcgggtggaggagaactttgtc
atcctcttctccgacctcaccatgcatgagctgaaggtgctgccccgggacctgcagctc
tgctcggagacagcatcaggtgtggatgttgggggccagcatgaatggggtgagctggta
cagctggacccccagaccgtgggtgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgcacgggaaggtggtgactgtcaggcatcaggctgtgactcggaagaaggac
aaccgctttgctgtggcgctagactcagaacagaacaacattcacgtgaaagatatcgtc
aaggtcattgacggcccccattcaggccgggagggggagattcgacatctttatcgcagc
ttcgccttcctgcattgcaagaaactggtggagaacgggggcatgtttgtctgcaagacc
cgccacctggtgctggccgggggctccaagccccgcgatgtgaccaactccaccatgggt
ggcttttcccctatgagcccccggatcagcagccccatgcaccccagtgctggaggtcag
tgtggcggctttggtagcccaggtggtggcagtggcggcatgagcaggggccggggtcgg
agagacaacgaactcatcggccagactgtgcgcatctcccaggggccctacaaaggttac
attggcgtggtgaaggatgccacagagtccacggcccgtgtggagctgcactccacctgc
cagaccatctctgtggaccgtcagcgcctcaccacagtgggctcacggcgcccgggtggc
atgacctcgacctatgggcggacacccatgtatggctcccagacgcccatgtacggctct
ggctcccgtacacccatgtacggctcacagacacctctccaggatggcagccgcacccca
cattacggctcgcagacgcccctgcatgacggcagccgcactcctgcccagagcggggcc
tgggaccccaacaaccctaatacgccgtcacgggctgaggaagaatatgagtatgccttc
gatgatgaacccaccccgtccccacaggcttatgggggaacccccaatccccagacacct
ggctacccagacccctcatccccacaggtcaacccacagtacaacccacagacgccaggg
acgccagccatgtataacacagaccagttctccccctatgccgccccctccccgcaaggc
tcctatcagcctagcccaagcccccagagctaccaccaggtggcacctagcccagctggg
taccagaacacccactctccggccagctaccatcccacgccctcgcccatggcctatcag
gctagtcccagccccagccctgttgggtacagtccgatgacacctggagccccctcccct
ggtggctacaacccccacacaccaggctcaggcattgagcagaactctagcgactgggta
accactgacatccaggtgaaggtgcgggacacctacctggatacacaggtggtgggacag
acgggtgtcatccgcagcgtcacgggaggcatgtgctctgtgtacctgaaggacagtgag
aaggttgtcagcatttccagtgagcacctggagcccatcacccccaccaagaataacaag
gtaaaagtgatcctgggtgaggatcgggaagccacaggtgtcctattgagcatcgatggt
gaggatggcattgtccgcatggaccttgatgagcagctcaagattctcaacctccgcttc
ctggggaagctcctggaagcctaa
DBGET
integrated database retrieval system
