Lemur catta (Ring-tailed lemur): 123624763
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Entry
123624763 CDS
T08326
Symbol
TRIM28
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcat01001
]
123624763 (TRIM28)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcat04121
]
123624763 (TRIM28)
Enzymes [BR:
lcat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123624763 (TRIM28)
Protein kinases [BR:
lcat01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
123624763 (TRIM28)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
123624763 (TRIM28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
PHD_2
PHD-1st_NSD
zf-RING_2
YaaC
DUF7615
Motif
Other DBs
NCBI-GeneID:
123624763
NCBI-ProteinID:
XP_045388854
LinkDB
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Position
19:complement(17989289..17995404)
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AA seq
830 aa
AA seq
DB search
MAASAAAAASAAAASAASGSPGSGEGSAGGEKRTAASSAAASASASSPAGGGGEALELLE
HCGVCRERLRPEREPRLLPCLHSACSACLGPAAPAAANSSGDGGAAGDGAVVDCPVCKQQ
CFSKDIVENYFMRDSGSKAATDAQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQR
VKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNAHKDHQYQ
FLEDAVRNQRKLLASLVKRLGDKHATLQKSTKEVRSSIRQVSDVQKRVQVDVKMAILQIM
KELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALLL
SKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGPAPM
APPRAPGTLSKQGSGSGQLMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGLMRK
VPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTAPPGTPGA
PPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGAGAEGPRLASPSGSTSSGLE
VVAPEGTSAPGGGPGTLDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEEW
SCSLCHVLPDLKEEDGNLSLDSDSSGVVAKLSPANQRKCERVLLALFCHEPCRPLHQLAT
DSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQSI
IGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSSQELSGGPGDGP
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcggcctcggcggcggcggcctcggccgcctctggcagc
ccgggctcgggcgagggctcggctggcggcgagaagcgcaccgccgcctcttcggccgcg
gcttcggcctcggcatcgtcgcccgcggggggcggcggtgaggcgctggagctgctggaa
cactgtggcgtgtgccgggagcgcctgcgacccgagagggagccgcgcctgctgccttgc
ttgcactcggcctgcagtgcctgccttggacccgcggcgcccgccgccgccaacagctcg
ggggatggcggtgcggctggcgacggcgctgtggtggactgccctgtgtgcaagcagcaa
tgcttctccaaagacatcgtggagaattacttcatgcgtgatagtggcagcaaggctgcc
actgatgcccaggatgctaaccagtgctgcacgagctgtgaggataatgcaccggccacc
agctactgcgtggagtgctctgagccgctgtgtgagacttgtgtggaggcgcaccagcga
gtgaagtacaccaaggaccacactgtgcgttccactgggccggccaaatctcgggatggt
gagcgtactgtctattgcaacgtacacaagcatgaaccccttgtgctgttctgtgagagc
tgtgacactctcacctgtcgagactgccagcttaatgcccacaaggaccaccagtaccag
ttcctagaggatgcagtgaggaaccagcgaaagctcctggcctcactggtgaagcgcctt
ggggacaaacatgcaacattgcagaagagcaccaaggaggttcgcagctcgatccgccag
gtgtctgatgtacagaagcgtgtgcaggtggatgtcaagatggccatcctgcagatcatg
aaggaactgaacaagcggggccgtgtactagttaatgatgcccagaaggtgactgagggg
cagcaggaacgcctggagcggcagcactggaccatgaccaagatccagaagcaccaggag
cacatcctgcgctttgcctcttgggctctggagagtgacaacaacacagccctactgctt
tctaagaagttgatctacttccagctgcaccgggccctcaagatgatcgtggatcccgtt
gagccacatggcgagatgaagtttcagtgggatctcaacgcctggaccaagagtgctgag
gcctttgggaagattgtggcagagcgtcctggcaccaactcaacgggccctgcacccatg
gctcctccgagagccccagggaccctgagcaagcagggctctggcagtggccagctcatg
gaggtacaggaaggctatggcttcgggtcagatgatccctactcaagtgcagagccccac
gtgtcaggcgtgaagcgatcccgctcgggtgagggtgaggtgagcggcctcatgcgcaag
gtgccacgagtgagccttgaacgcctggacctggacctcacggctgacagccagccccca
gtcttcaaggtcttcccgggcagcaccaccgaggactacaatcttattgttattgagcgg
ggcgctgctgctgcagctgctggccagcccgggactgcgcccccaggaactcctggtgcc
ccaccgttacctggcatggccatcgtcaaggaggaggagacagaggctgccattggagcc
cctcctgctgccactgaaggccctgagaccaaacctgtgctgatggctctggcagagggt
gctggtgctgagggcccccgcctggcctcacctagtggcagcaccagctcaggcctggag
gtggtggctcctgagggtacctcggccccaggtggtggcccaggcaccctggatgacagt
gccaccatttgccgcgtctgtcagaagccaggtgacctggtcatgtgcaaccagtgtgag
ttttgcttccatttagactgccacctgcctgccctgcaggatgtgccaggggaggagtgg
agctgctcactctgccatgtgctccctgacctgaaggaggaggatggcaacctcagcctg
gactcagacagcagtggtgtggtggccaagctctcaccagccaaccagcggaaatgtgag
cgtgtcctgctggccctgttctgtcatgaaccttgccgccccctgcatcagctggctacc
gactctaccttctccttggaccaacctggtggcaccctggatctgaccctcatccgtgcc
cgtctccaggagaagttgtcacccccttacagttccccccaggagtttgcccaggatgtg
ggccgcatgttcaagcagttcaataagttgactgaggacaaggcggacgtgcagtccatc
atcggcctgcagcgcttcttcgagacgcgcatgaatgaggccttcggtgacaccaagttc
tctgctgtgctggtggagcccccgccgctgagcctgcctggtgctggcctgagctcccag
gagctgtctggtggccctggtgatggcccctga
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