Lemur catta (Ring-tailed lemur): 123625055
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Entry
123625055 CDS
T08326
Symbol
CNOT1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
123625055 (CNOT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123625055 (CNOT1)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
123625055 (CNOT1)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
123625055 (CNOT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
NOT1_connector
ARM_Cnot1
CNOT1_TTP_bind
DUF3819
CNOT1_HEAT
CNOT1_1st
Motif
Other DBs
NCBI-GeneID:
123625055
NCBI-ProteinID:
XP_045389211
LinkDB
All DBs
Position
20:29314126..29394153
Genome browser
AA seq
2379 aa
AA seq
DB search
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNRHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECASLITKPNFISTLSYAIDNPLHYQKSLKPAPHLFAQLSKVLK
LSKVQEVIFGLALLNSSSSDLRGFAAQFIKQKLPDLLRSYIDADVSGNQEGGFQDIAIEV
LHLLLSHLLFGQKGAFGVGQEQIDAFLKTLRRDFPQERCPVVLAPLLYPEKRDILMDRIL
PDSGGVAKTMMESSLADFMQEVGYGFCASIEECRNIIMQFGVREVTAAQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKSDGTQAHTWNVEVLIDVLKELNPSLNFKEVTYE
LDHPGFQIRDSKGLHNVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLINPEIFC
FADYPCHTVATDILKAPPEDDNREIATWKSLDLIESLLRLAEVGQYEQVKQLFSFPIKHC
PDMLVLALLQINTSWHTLRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
AMAEWYMRGEQYDQAKLSRILDVAQDLKALSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACMTFLKRRCPSILGGLAPEKDQPKSAQLPPETLATMLACLQACAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRPPSASSLDAISPVQIDPLAGMASL
SIGGSAAPHTQSMQGFPPNLGSAFSTPQSPAKAFPPLSTPNQTTAFSGIGGLSSQLPVGG
LGTGSLTGALGLPAVNNDPFVQRKLGTSGLNQPTFQQSKMKPSDLSQVWPEANQHFSKEI
DDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSTIKREREVFNCMLRNLFEEYRFFPQ
YPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFKNR
LKDYPQYCQHLASIGHFMQFPHHLQEYIEYGQQSRDPPVKMQGSITTPGSIALAQAQAQA
QVPAKAPLAGQVSTMVTTSTTTTVAKTVTVTRPTGVSFKKDVPPSINTTNIDTLLVATDQ
TERIVEPPENIQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYLVMKRVSIEPN
FHSLYSNFLDTLKNPEFNKMVLNETYRNIKVLLTSDKAAANFSDRSLLKNLGHWLGMITL
AKNKPILHTDLDVKSLLLEAYVKGQQELLYVVPFVAKVLESSIRSVVFRPPNPWTMAIMN
VLAELHQEHDLKLNLKFEIEVLCKNLALDINELKPGNLLKDKDRLKNLDEQLSAPKKDVK
QPEELPPITTTTTSTTPATSTTCTATVPPQPQYSYHDINVYSLAGLAPHITLNPTIPLFQ
AHPQLKQCVRQAIERAVQELVHPVVDRSIKIAMTTCEQIVRKDFALDSEESRMRIAAHHM
MRNLTAGMAMITCREPLLMSISTNLKNSFASALRTASPQQREMMDQAAAQLAQDNCELAC
CFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYCDPVVLTYQAERMPEQIRLKVGGV
DPKQLAVYEEFARNVPGFLPTNDLSQPTGFLAQPMKQAWATDDVAQIYDKCITELEQHLH
AIPPTLAMNPQAQALRSLLEVVVLSRNSRDAIAALGLLQKAVEGLLDATSGADADLLLRY
RECHLLVLKALQDGRAYGSPWCNKQITRCLIECRDEYKYNVEAVELLIRNHLVNMQQYDL
HLAQSMENGLNYMAVAFAMQLVKILLVDERSVAHVTEADLFHTIETLMRINAHSRGNAPE
GLPQLMEVVRSNYEAMIDRAHGGPNFMMHSGISQASEYDDPPGLREKAEYLLREWVNLYH
SAAAGRDSTKAFSAFVGQVELLERKMHQQGILKTDDLITRFFRLCTEMCVEISYRAQAEQ
QHNPAANPTMIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKINLLNKVLGIVVGVLLQD
HDVRQSEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFCNTFHILRPTKAPGFVYA
WLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLRNVELTKPMQILYKGTLR
VLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNMRLPDPFTPNLKVDMLSE
INIAPRILTNFTGVMPPQFKKDLDSYLKTRSPVTFLSDLRSNLQVSNEPGNRYNLQLINA
LVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDTEGRYLFLNAIANQLRYP
NSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPAFKF
WNHEFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTGAS
NT seq
7140 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgactcgctctcgctggccttgtctcaaatcagctacctggtggacaattta
accaagaaaaactaccgagccagccagcaggaaatacagcatattgtgaatcggcacggt
cctgaggcagacaggcatttattacgctgcctattttcgcatgtggatttcagtggcgat
ggtaaaagcagtggcaaagatttccatcagactcagtttctgattcaggagtgtgcatcg
ctgattacaaagccaaattttatctcaacgttgtcctatgccattgataatccattgcac
tatcagaagagtttaaagcctgcacctcacttatttgcccagctgagtaaagtgctcaag
ttaagcaaagtacaagaggtaatttttggccttgccctgttgaattcttctagctcagat
ctcagaggttttgctgcccagtttatcaaacagaaacttccagatcttctgcgttcttac
attgacgcagacgtcagtggaaatcaagaaggtggcttccaagatatagcaatagaggtc
ctacacctcctcctctcccatctcctctttgggcagaagggagcttttggagttggacag
gagcagatagacgcttttcttaagacactgcgcagagattttccccaagaacgctgtccc
gtggtgctcgcaccacttttataccctgaaaaacgggacattctaatggacaggatcctg
cctgattctggaggggtagctaaaaccatgatggagagctctttggctgatttcatgcaa
gaagtaggctatggcttttgtgcgagtattgaagaatgtcgcaatataatcatgcagttt
ggtgttcgggaggtcacagctgcccaggttgcaagggttttgggaatgatggctcgaact
cattcaggattaacagatggtattccattacagagtatctctgctcctggcagtggtatc
tggagtgacggaaaggataaaagtgatggaacacaggcacacacatggaatgtagaagtc
ttgattgatgttctcaaagaactgaacccgagtttgaatttcaaggaagtaacttatgaa
ctggaccatcctggatttcaaattcgtgacagtaaaggacttcataatgtggtttatggc
attcagaggggtttgggtatggaagtattcccagtagacctcatatatagaccttggaaa
catgcagaaggccagctctccttcattcagcattcccttataaatccagaaatcttctgt
tttgcggattatccctgtcatactgttgccactgatattctgaaagcaccaccggaggat
gacaatcgagaaattgccacatggaagagcttggatttgattgaatctctgctgaggctt
gcagaggttgggcagtatgagcaagtcaaacagctcttcagcttccctatcaaacactgt
ccagacatgctggtattggccttactacaaatcaacacctcctggcataccttgcgccac
gaactcatctccactctgatgccaattttccttggaaaccatcctaactcagctattatt
ttgcactatgcatggcatgggcagggacagtctccctcaattcgccaacttatcatgcat
gcaatggcagaatggtacatgagaggggagcagtatgatcaggccaaattatctcgaata
cttgatgtggcccaggacttgaaggccttgtcaatgctgctaaatggtactcctttcgcc
tttgtgattgaccttgctgcacttgcttcacgtcgtgaatacctcaaacttgacaagtgg
ctcacggataagattcgagagcatggggagccttttatccaagcatgtatgactttttta
aagagacggtgcccttctatattgggtggacttgccccagagaaagaccaacccaaaagt
gctcaacttcctccagaaactctggcgacaatgttggcctgtctgcaggcttgtgcaggg
agtgtttctcaggagttgtcagagaccattcttaccatggtggccaattgtagtaatgtt
atgaataaggccagacaaccaccacctggagttatgccaaaaggacgccctcccagtgct
agcagcttagatgccatttctcccgttcagattgaccctcttgctggaatggcatctctt
agtataggtggttcagctgcccctcacactcagagcatgcagggttttcctccaaatttg
ggttctgcattcagtacccctcagtcaccagcaaaagcatttccacccctttcaacccca
aatcagacaacagcattcagtggtattggaggactttcatcacagcttccagtaggtggt
cttggcacaggcagcctgactggggctcttggactccctgcagtgaataacgaccctttt
gtgcagaggaaactgggcacctctggactgaaccagcctacattccagcagagtaagatg
aaaccttcggacttgtctcaggtatggccagaggcaaaccagcactttagcaaagagata
gatgatgaagcaaacagctatttccagcgaatatataaccacccaccacatccaaccatg
tctgttgatgaggtattagaaatgctacagagatttaaagactctactataaagagggaa
cgagaagtatttaactgtatgctaaggaacttgtttgaagaatatcggttttttcctcag
taccccgataaagagttacatataacagcctgtctgtttggtggaataatcgaaaaagga
ctggtcacttacatggcactgggtctggccctgcgatatgttcttgaagccttacgcaag
ccttttggatccaaaatgtattactttgggattgctgcactagatagatttaaaaataga
ttgaaggactatccccagtattgtcagcatttggcttctattggtcactttatgcagttt
ccacatcatttacaggaatatattgagtatggacagcagtccagagatcctcctgtgaaa
atgcaagggtctatcacaacccctggaagtattgcactggctcaggcacaggctcaggcc
caggttccagcaaaagctcctcttgctggtcaggttagcactatggtaaccacctcaacg
accaccactgttgctaaaacagttacagtcaccaggccaactggagtcagctttaagaaa
gatgtgccaccttctattaatactacaaatatagatacattgcttgtggccacagatcaa
actgagagaattgtggaacccccagaaaatatccaagagaaaattgcatttatcttcaat
aatctttcacagtcgaatatgacacaaaaggttgaagagctaaaggagactgtgaaagaa
gaatttatgccttgggtctcacagtatttggttatgaagagagtcagtattgagccaaac
tttcacagcctatattcaaacttccttgatacgctgaagaatcctgaatttaacaagatg
gtcctgaatgagacctacagaaacatcaaagtcctcttgacttctgacaaagctgcggcc
aatttctcagatcgttctttgcttaagaacttgggacattggttaggaatgatcacatta
gctaaaaataaacccatcttacacactgacttggatgtgaaatctttgctgctagaggct
tatgttaaaggacaacaagaattgctctatgtagtgccatttgttgccaaagtcttagag
tctagcattcgtagtgtggttttcaggccaccaaacccttggacaatggcaattatgaat
gtattagctgagctacatcaggaacatgacttaaagttaaacttgaagtttgagattgaa
gtcctctgcaagaaccttgcattagacatcaatgagctaaaacctggaaacctcctaaag
gataaagatcgcctaaagaacttagatgagcaactctctgctccaaagaaagatgtcaag
cagccagaagaactccctcccattacaaccacaacaacttctacgacaccagctaccagc
accacctgtacagccacagttccaccacagccacagtacagctaccatgacatcaacgtc
tattcccttgcaggcctggcaccacacattactctaaacccaacaattcccttgtttcag
gcccatccacagttgaagcagtgtgtgcgtcaagcaattgaacgggctgtccaagagcta
gtccatcctgtggtagatcgatcaattaagattgccatgactacttgtgagcaaatagtc
aggaaggattttgccctggattctgaggaatctcgaatgcgaatagcagctcatcatatg
atgcggaacttgacagctggaatggctatgattacttgcagggaacctttgctcatgagc
atatctaccaacctgaaaaacagttttgcctcagccctccgtactgcttccccacaacaa
agggaaatgatggatcaggcagcagctcagttagctcaggacaattgtgaattagcttgc
tgttttattcagaagactgcagtagaaaaagcaggccctgagatggacaagagattagca
actgaatttgagctgagaaaacatgccaggcaagaagggcgcagatactgtgatcctgtt
gtgttaacatatcaagccgagcggatgccagagcaaatcaggctgaaagttggtggtgtg
gatccaaagcagctggctgtttatgaagagtttgcacgcaatgtgcctggctttttgcct
acaaatgacttaagtcagcctacaggatttttagctcagcccatgaagcaagcttgggca
acagatgatgtggcacagatttatgataagtgcattacagaactggagcagcacctacat
gccatcccaccaactttagccatgaaccctcaagctcaggctcttcgaagtcttttggag
gttgtagtattatctcgaaactctcgggatgccatagctgctcttggattgctccagaag
gctgtagagggcttgctagatgccacaagtggtgctgatgctgaccttctgctgcgctac
agggaatgccacctcttggtcctgaaagctctgcaggatggccgagcatatgggtcccca
tggtgcaacaaacagatcacaaggtgcctaattgaatgtcgagatgaatataaatataat
gtggaggctgtggagttgctaattcgcaatcatttggttaatatgcagcagtacgatctt
cacctagctcagtcaatggaaaatggtttaaactacatggctgtggcatttgctatgcaa
ttggtcaaaatcctgctggtggatgaaaggagtgttgcccatgttactgaggcagatctc
ttccacaccattgaaacccttatgaggattaatgctcattccagaggcaacgctccagaa
ggattgccccagctgatggaagtagtgcgatccaactatgaagcaatgattgatcgtgct
catggaggccctaactttatgatgcattctgggatatctcaagcctcagagtatgatgac
cctccaggcctgagggagaaggcagagtatcttctgagggaatgggtgaatctctaccat
tcagcagcagctggccgtgacagcactaaagctttctctgcatttgttggacaggtagag
cttttggaaagaaagatgcaccagcaaggaatactgaagaccgatgatctcataactagg
ttctttcgtctgtgtactgaaatgtgcgttgaaatcagttaccgtgctcaggctgagcag
cagcacaatcctgctgctaatcccaccatgatccgagccaagtgctatcacaacctggat
gcctttgttcgactcattgcactgctagtgaaacactcaggggaggccaccaacactgtc
acaaagattaatctgctgaacaaggtccttggtatagtagtgggagttctcctgcaggat
catgatgttcggcaaagtgaatttcagcagcttccctaccatcgaatttttatcatgctg
ctcttggaactcaatgcacccgaacatgtgttggaaaccattaatttccagacacttaca
gctttctgcaatacattccacatcttgaggcctaccaaagctcctggctttgtatatgcc
tggcttgaactcatctcccatcggatatttattgcaagaatgctggcacatacaccacag
cagaagggatggcctatgtatgcacagctactgattgatttattcaagtatttagcgcct
ttccttagaaatgtggaactcaccaaacctatgcaaatcctctacaagggcactttaaga
gtgctgctggttcttttgcatgatttcccagagttcctttgtgattaccattatgggttc
tgtgatgtgatcccacctaattgtatccagttaagaaatttgatcctgagtgccttccca
agaaacatgaggctcccagacccattcactcctaatctgaaggtggacatgttgagtgaa
attaacatcgcaccccggatactcaccaatttcactggagtgatgccacctcagttcaaa
aaggatttggattcctatcttaaaactcgatcgccagtcacttttctgtctgatctgcgc
agcaacttgcaggtatccaatgagcctggcaatcgctacaacctccagctcatcaatgca
ttggtgctctatgtaggaactcaggccattgcgcacatccacaacaagggcagcacacct
tcaatgagcaccatcacccattcagcacacatggatatcttccagaacctggctgtggac
ttggacactgagggtcgatacctcttcttgaatgcaattgcaaaccagctgcggtaccca
aatagccacactcactacttcagctgcaccatgctgtacctttttgcagaggccaacact
gaagctatccaggaacagatcacaagggttctcttggaacggttgattgtaaataggcca
catccttggggtcttcttattacctttattgagctgattaaaaatccagcgtttaagttc
tggaaccacgagtttgtacactgtgccccagaaatcgaaaagttattccagtcggttgca
cagtgctgcatgggacagaagcaggctcagcaagtaatggaagggacaggtgccagttag
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integrated database retrieval system
