KEGG   Lemur catta (Ring-tailed lemur): 123625312
Entry
123625312         CDS       T08326                                 
Symbol
AMFR
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat04137  Mitophagy - animal
lcat04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123625312 (AMFR)
 09140 Cellular Processes
  09141 Transport and catabolism
   04137 Mitophagy - animal
    123625312 (AMFR)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcat04121]
    123625312 (AMFR)
Enzymes [BR:lcat01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     123625312 (AMFR)
Ubiquitin system [BR:lcat04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123625312 (AMFR)
  Multi subunit type E3
   ERAD complex
    123625312 (AMFR)
   LMBR1L-GP78-UBAC2 complex
    123625312 (AMFR)
SSDB
Motif
Pfam: TPR_SYVN1_N G2BR zf-RING_2 zf-C3HC4_2 CUE zf-C3HC4 zf-RING_11 zf-C3HC4_3 zf-RING_UBOX zf-ANAPC11 zf-rbx1 zf-RING_5 zf-RING_16 Prok-RING_4 zf-C3HC4_4 zf-RING_Vps41 zf_RING_Vps8 SVIP
Other DBs
NCBI-GeneID: 123625312
NCBI-ProteinID: XP_045389651
LinkDB
Position
20:30775345..30814450
AA seq 643 aa
MPLLFLERFPWPSLRTYTGLSGLALLGTIVSAYRALSLPEAAPGEPEPLTASLQSEPPAP
AQPSAGGPRARDVAQYLLSDSLFVWVLVNTACCVLMLVAKLIQCIVFGPLRVSERQHLKD
KFWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFAGLVFLHLMVQLCKDRFEYLSFSPTTPM
SSHGRVLSLLIAMLLSCCGLAVVCCVTGYTHGMHTLAFMAAESLLVTVRTAHVILRYIIH
LWDLNHEGTWEGKGTYVYYTDFVMELTLLSLDLMHHIHMLLFGNIWLSMASLVIFMQLRY
LFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNNDDCAICWDSMQAARKLPCGHLF
HNSCLRSWLEQDTSCPTCRMSLNIADNNRVREDHQGENLDENLVPVAAAEGRPRLNQHNH
FFHFDGSRIASWLPSFSVEVMHTTNILGITQASNSQLNAMAHQIQEMFPQVPYHLVLQDL
QLTRSVEITTDNILEGRIQVPFPTQRSESIRPALNSPMERPNSDQEEGETSAQAERVPLD
LSPRLEETLDLSEVEVEPSEVEDFEARGSRFSKSADERQRMLVQRKDDLLQQARKRFLNK
SSEDDTASDSFLPSEGASSDPVTLRRRMLAAAAERRLQKQQSS
NT seq 1932 nt   +upstreamnt  +downstreamnt
atgccgctgctcttcctcgagcgcttcccctggcccagcctccgcacttacacgggcctc
agcggcctggccctgctgggcaccatcgtcagcgcctaccgcgccctcagcctgcccgag
gccgcgccaggcgagccggagccgctaacggcctcgctgcagtcggagccgcccgcgccc
gcccagccgagcgccgggggaccccgggcccgcgacgtggcccagtacctgctctcggac
agcctcttcgtgtgggttctagtaaacactgcttgctgtgttttgatgttggtggctaag
cttatccagtgtattgtgtttggccctcttcgagtgagcgagagacagcatctcaaagac
aagttttggaattttatcttctacaagttcattttcatttttggtgtgctgaatgtccag
acagtggaagaggtcgtcatgtggtgcctctggtttgctggacttgtatttctgcatctg
atggttcagctctgcaaggaccggtttgaatatctttccttttctcccacgacaccaatg
agtagccacggtcgagtcttgtccctgttgattgctatgctgctttcatgctgtggattg
gcagttgtctgctgtgtcacaggctacacccatggaatgcacaccttggctttcatggct
gcagagtctcttcttgtgacagtgaggactgctcatgtgattttacgatatataattcac
ctctgggacctcaaccacgaggggacctgggaaggaaagggaacatatgtgtattataca
gattttgtcatggagctcactctcttgtccctggacctcatgcaccacattcacatgctg
ttatttggcaacatctggttgtccatggccagcctagtcatctttatgcagctgcgttac
ctgtttcatgaggtgcagcgtcggattcgtcggcacaagaactatctgcgtgtggttggt
aacatggaagccaggtttgcagttgcgactccagaggagctggctgtcaataatgacgac
tgtgccatctgctgggactccatgcaggctgcaaggaagctgccctgtggacatcttttc
cacaactcctgtcttcgttcctggctagaacaagacacctcctgtccaacatgcagaatg
tcccttaacattgctgacaataaccgtgtcagggaagaccatcaaggagagaacttggac
gagaatttggttcctgtagcagcagccgaaggcagacctcgcctaaaccagcacaatcac
ttcttccacttcgatgggtcccggattgcaagctggctgccgagtttttcggttgaagtg
atgcacaccaccaacattctgggcattacgcaggcaagcaactcccagctcaatgcaatg
gcccatcagattcaggagatgtttccgcaggttccgtaccacctagtgctgcaggacctg
cagctgacacggtcggtggaaataacaacagacaacattttagaaggacggattcaagta
ccttttcccacacagcggtcagagagcattagacctgcgttgaacagtcctatggagagg
ccaaacagtgaccaggaagagggagaaacttccgctcaggcggagcgcgtgccgctggac
ctcagccctcgcctggaggagacgctggacttgagcgaggtggaggtggagcccagcgag
gtggaggacttcgaggctcgggggagccgcttctccaagtctgcggacgagagacagcgc
atgctggttcagcgcaaggacgacctcctgcagcaggcccgcaagcgtttcttgaacaaa
agttctgaagatgacacggcctcagacagcttcctcccctcagaaggcgcgtcctctgac
cctgtgaccctgcgtcgaaggatgctggccgccgccgccgagcggaggcttcagaagcag
cagagctcctag

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