Lemur catta (Ring-tailed lemur): 123626021
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Entry
123626021 CDS
T08326
Symbol
DDX54
Name
(RefSeq) ATP-dependent RNA helicase DDX54 isoform X1
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcat03009
]
123626021 (DDX54)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123626021 (DDX54)
Ribosome biogenesis [BR:
lcat03009
]
Eukaryotic type
Pre-60S particles
Helicases
123626021 (DDX54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
ResIII
Motif
Other DBs
NCBI-GeneID:
123626021
NCBI-ProteinID:
XP_045390734
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All DBs
Position
21:24450653..24469028
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AA seq
880 aa
AA seq
DB search
MAAGTRAAAGPRSRAAMAQWRKRKGLRRRRGAASQTRSSDSEDGEFEIRAEDDARARKLR
PGRPLPTFPTSECTSDVEPDTREMVRAQNKKKKKSGGFQSMGLSYPVFKGIMKKGYKVPT
PIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLKTRSAQTGARALILSPTRELAL
QTMKFTKELGKFTGLKTALILGGDKMEDQFAALHENPDIIIATPGRLVHVVVEMNLKLQS
VEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTVLFSATLPKLLVEFARAGLTEPVLIR
LDVDAKLNEQLKTSFFLVREDTKAAVLLYLLRNVVRPQDQTVVFVATKHHAEYLTELLTT
QRVSCTHIYSALDQTARKINLARFAHGKCSALIVTDLAARGLDIPLLDNVINYSFPAKGK
LFLHRVGRVARAGRSGTAYSLVAPDEVPYLLDLHLFLGRALTLARPHEEPSGSAGEDGVL
GRVPQSVVDEEDGGLQSTLEQSLELRGLGRVADNAQQQYVRSRPAPSPESMKRAKELDLA
GLGLHPLFSSRFEGDELRRLRLVDSIRNYRSRATIFEINASSRDLSNQVMRAKRQKDRKA
IARFQQGRQEGPVGPAPSRPALQEKQPEEEEEEEEEEEEGENVEDIFTEVLGRKRQQPGP
NRRAKRRREEAQQRDQEFYVPYRPKDFDSERGLSVGGDGGTFEQQVTGAVLDLMGDEAQN
LTRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDS
EEEGASDRRGPERRGGKRGRGRAGAPQSRTPGTPAGRVRSELKTKQQILKQRRRTQKLRF
LQRGGLKQLSARNRRRVQELRQGAFGRGAPSKKGKMRKRM
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atggcggccggcacgcgcgcggcggccgggcctcggtcgcgagctgccatggcccagtgg
aggaagaggaaggggctccggagacgccggggcgcggcctcccagacccgcagcagcgac
tcggaggacggcgagttcgagatccgggcggaagatgacgcccgggcccggaagctgaga
cctggcagacccctgcccaccttccccacctcggaatgcacctcggacgtggagccggac
acccgggaaatggttcgagcccagaataagaagaagaagaagtctggaggcttccagtcc
atgggcttgagctacccggtgttcaaaggcatcatgaagaaggggtacaaggtgcccacg
cccatccagaggaagaccatcccggtgatcctggacggcaaggacgtggtggccatggcc
cggacgggcagcggcaagacggcctgcttcctgctccccatgttcgagcggctcaagacg
cgcagtgcccagaccggggcccgtgccctcatcctgtcacccactcgcgagctggccctg
cagaccatgaagttcaccaaagagctgggcaagttcactggcctcaagaccgccctgatc
ctgggcggggacaaaatggaagaccagtttgcagccctgcacgaaaatcctgacataatc
attgccacccctgggcggttggtgcacgtcgtggtggagatgaacctaaagctgcagagc
gtggagtacgtggtgtttgacgaagccgaccggctcttcgagatgggctttgcagagcag
ctgcaggaaatcatcgcccgcctccccgggggccaccagacggtgctgttctctgccacg
ctgcccaagctgctggtggagtttgcccgggcaggcctcacggagcccgtgctcatccgg
ctagacgtggacgccaagctcaacgagcagctcaagacctccttcttcctggttcgcgag
gacaccaaggctgctgtgctgctctacctgctgcgcaacgtggtgcggccccaggaccag
acggtggtgttcgtggccacaaagcaccacgccgagtatctcacggagctgctgacgacg
cagcgggtgagctgcacgcacatctacagcgccctggaccagacggcccgcaagatcaac
ctcgccaggttcgcgcacggcaagtgctccgccctcatcgtgaccgacctggccgcccgg
ggcctggacatccccctgctggacaacgtcatcaactacagcttccccgccaagggcaag
ctcttcctgcaccgcgtcggccgtgtggcccgggccggccgaagtggcacagcctactcc
ttggtggccccagacgaagtcccctacctgctggacctgcacctgttcctgggtcgtgct
ctcaccctcgcccgcccccacgaggagccctcaggttcggccggcgaggatggcgtgctg
ggccgggtgccgcagagcgtggtggacgaggaggacggcggcctgcagagcaccctggag
cagtcgctggagctgcggggcctgggccgcgtggccgacaacgcccagcagcagtacgtg
cgctcgcggccggcgccctcgcccgagtccatgaagagggccaaggagctggacctggcg
gggctgggcctgcaccccctcttcagctcacgcttcgagggggacgagctgcggcggctg
aggctggtggacagcatcaggaactaccgctcgcgggcgaccatctttgagatcaacgcc
tccagccgggacctgagcaaccaggtgatgcgtgccaagcggcagaaggaccgcaaggcc
atcgccagattccagcaggggcgacaggagggtccagtgggcccagccccgagccgtccg
gcactgcaggagaagcagcctgaggaggaggaggaggaggaggaggaggaggaggaagga
gagaatgtggaggacatcttcacagaggtcttgggcaggaagcggcagcagccaggaccc
aacaggagagccaagaggcggagggaggaggcccagcagcgggaccaggagttctatgtc
ccctaccggcccaaggacttcgacagcgagcggggcctgagtgtcggcggtgacgggggg
accttcgagcagcaggtgaccggtgccgtcctggacctgatgggggacgaagcacagaac
ctgaccaggggccggcagcagctgaagtgggaccggaagaagaagcggtttgtgggacaa
tcgggacaggaggacaagaagaagatcaagacagagagtggccgctacatcagcagctct
tacaagcgagacctctaccaaaagtggaaacagaaacagaaaattgatgaccgggactcg
gaggaggaaggggcatctgatcggagaggcccagagcgaagaggtgggaagcgaggccgc
ggacgagcaggcgcaccccagtcccgcaccccgggcacccctgcaggccgcgtgcgctca
gagctcaagaccaaacaacagatcctgaagcagcggcgaaggacccagaagctgcgcttc
ctgcagcgcgggggcctcaagcagctctcagcccgcaaccgccgccgcgtccaggagctg
cggcagggcgccttcggccggggcgccccctccaagaagggcaagatgaggaagaggatg
taa
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