KEGG   Lemur catta (Ring-tailed lemur): 123626048
Entry
123626048         CDS       T08326                                 
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
  KO
K23625  ataxin 2/2L
Organism
lcat  Lemur catta (Ring-tailed lemur)
Pathway
lcat05014  Amyotrophic lateral sclerosis
lcat05017  Spinocerebellar ataxia
lcat05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:lcat00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    123626048 (ATXN2)
   05017 Spinocerebellar ataxia
    123626048 (ATXN2)
   05022 Pathways of neurodegeneration - multiple diseases
    123626048 (ATXN2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lcat03019]
    123626048 (ATXN2)
Messenger RNA biogenesis [BR:lcat03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123626048 (ATXN2)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2 LSM
Other DBs
NCBI-GeneID: 123626048
NCBI-ProteinID: XP_045390774
LinkDB
Position
21:25435708..25528186
AA seq 1138 aa
MSLKPQQQQQQQPPAAANVRKPGGGGLLTSPAAAPSASSSSVSSSSAAASSSAAAASAGG
GRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTY
SPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSA
ISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDS
SLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRN
SSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSASHTSDFNL
NSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPS
HPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSE
AATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPT
EAVAMPVPAASPTPASPASNRAVTPSVEAKDSRLQDQRQNSPAGNKENIKPSETSPSFSK
AENKGVSPIISEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRELIKDKIE
SSVKDSFIDNSSSNCTSGSSKANSPSVSPSILSNTEHKRGPEVTSQGVQTSSPACKQEKD
DKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPV
YTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQST
MMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNAR
MMAPPAHAQPGLVSSSAAQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAH
PNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYH
AGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGM
VPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq 3417 nt   +upstreamnt  +downstreamnt
atgtcgctgaagccccagcagcagcagcagcagcagccgcccgcggcagccaatgtccgc
aagcccggcggcggcggccttctcacgtcgcctgccgccgcgccgtcggcgtcctcgtcc
tcagtctcgtcgtcctcggccgcggcttcctcctcggcggccgcagcgagcgcaggcggc
gggaggcccggactgggcagaggtcgaaacagtagcaaaggactgcctcagtctacgatt
tcttttgacggaatctatgcaaacatgaggatggttcatatacttacatcggttgttgga
tccaaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacatac
agtcctaagtgcgatttggtacttgatgctgcacacgagaaaagtacagaatccagttcg
ggcccaaaacgtgaagaaataatggaaagtattttgtttaagtgttctgactttgttgtc
gtacagttcaaagatatggactcgagttatgcaagaagagatgcttttactgactctgct
atcagtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgggatgcgggg
gaactcacaaccaatgaggaactggaggctttggaaaatgacgtgtctaatggatgggat
cccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtctacatatgatagc
agtttatcttcatatacggtgcccttagaaagggataactcagaagaatttttaaaacgg
gaagcaagggcaaaccagttagcagaagaaatcgaatcaagtgcccagtacaaagctcgg
gtggccctggaaaatgatgataggagcgaggaagaaaaatacacagcagttcagagaaat
tccagtgaacgtgaggggcacagcataaacactagggaaaataaatatattcctcctgga
caaagaaatagagaagtcatatcctggggaagtgggagacagaattcaccgcgtatgggc
cagcctggatcgggctccatgccatcaagatccgcttctcacacttcagatttcaacctg
aattctggttcagaccaaagagtagttaatggaggtgttccctggccatcgccttgccca
tctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgg
gcagccacccctacacggccgccctccaggcccccctcgcggccatccagacccccgtct
cacccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttca
gaaggacctccaaggatgtccccaaaggcccagcgacaccctcgaaatcacagagtttct
gctgggaggggttccatttccagtggcctagagtttgtatcccacaacccaccaagtgaa
gcagctactcctccagtggcaaggaccagtccctcggggggaacatggtcatcagtggtc
agtggggttccaagattgtcccctaaaactcacagacccaggtcacccagacaaaacagt
attggaaatactcccagtgggccagttcttgcttctccccaagctggaattattccaact
gaagctgttgccatgcctgttccagctgcatctcctacacctgctagtcctgcatctaac
agagctgttaccccttctgttgaggctaaagattccaggcttcaagatcagaggcagaac
tctcctgcagggaataaagaaaatattaagcccagtgaaacatcacctagcttctcaaaa
gctgaaaataaaggtgtatcgccaattatttctgaacatagaaaacagattgatgattta
aagaaatttaagaatgattttaggttacagccaagttctacttctgaatctatggatcaa
ctattaaacaaaaatagagagggagaaaaatcaagagagttgatcaaagacaaaattgaa
tcaagtgttaaggattctttcattgacaatagcagcagcaactgtaccagtggcagcagc
aaggcgaatagccccagcgtttccccttcaatacttagtaacacagagcacaagagggga
cctgaggtcacatcccaaggagttcagacttccagtccagcatgtaagcaagagaaagat
gataaagaagagaagaaagatgcagctgagcaagttaggaaatcaacattgaatcccaat
gcaaaggagttcaacccacgttccttttctcagccaaagccttctaccaccccaacttct
cctcggcctcaagcacaacctagcccatctatggtgggtcatcaacagccgactccagtt
tatactcagcctgtttgttttgcaccaaatatgatgtatccagtcccagtgagcccaggc
gtgcaacctttatacccaatacccatgacgcccatgcctgtgaatcaagccaagacatat
agagcaggtaaagtaccaaatatgccccaacagcggcaagaccagcatcaccagagcacc
atgatgcatccagcctccgcagcaggcccaccgattgtagccaccccaccagcttactcc
acgcaatacgttgcctatagtcctcagcagtttccaaatcagccacttgttcagcatgtg
ccacattatcagtctcagcatcctcacgtctacagtcctgtcatacagggtaacgctagg
atgatggcaccaccagcacatgcccagcctggtttagtgtcttcatcagcagctcagtac
ggagctcatgagcagacacatgccatgtatgcatgtcccaaattaccatacaacaaggag
acaagcccttctttctactttgccatttccacgggctcccttgctcagcagtatgcgcac
cctaacgctaccctgcacccacatactccacatcctcagccttcagccacccccactgga
cagcaacaaagccaacatggtggaagtcatcctgcacccagtcctgttcagcaccatcag
caccaggctgcccaggctctccatctggccagtccgcagcagcagtccgccatctaccac
gcagggctcgcgccaaccccaccttccatgacacctgcctctaatacgcagtcgccacag
aatagcttccccacagcacaacagaccgtctttacgatccatccttctcacgtccagccg
gcatataccaacccaccccacatggcccacgtacctcaggctcatgtacagtcaggaatg
gttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagccacccggc
ggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcg
catttcccctatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa

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