Lemur catta (Ring-tailed lemur): 123626048
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Entry
123626048 CDS
T08326
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat05014
Amyotrophic lateral sclerosis
lcat05017
Spinocerebellar ataxia
lcat05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123626048 (ATXN2)
05017 Spinocerebellar ataxia
123626048 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
123626048 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123626048 (ATXN2)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
123626048 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
123626048
NCBI-ProteinID:
XP_045390774
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All DBs
Position
21:25435708..25528186
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AA seq
1138 aa
AA seq
DB search
MSLKPQQQQQQQPPAAANVRKPGGGGLLTSPAAAPSASSSSVSSSSAAASSSAAAASAGG
GRPGLGRGRNSSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGIYEGVFKTY
SPKCDLVLDAAHEKSTESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYARRDAFTDSA
ISAKVNGEHKEKDLEPWDAGELTTNEELEALENDVSNGWDPNDMFRYNEENYGVVSTYDS
SLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEEKYTAVQRN
SSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRSASHTSDFNL
NSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPPSRPSRPPS
HPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPPSE
AATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPSGPVLASPQAGIIPT
EAVAMPVPAASPTPASPASNRAVTPSVEAKDSRLQDQRQNSPAGNKENIKPSETSPSFSK
AENKGVSPIISEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSRELIKDKIE
SSVKDSFIDNSSSNCTSGSSKANSPSVSPSILSNTEHKRGPEVTSQGVQTSSPACKQEKD
DKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMVGHQQPTPV
YTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQRQDQHHQST
MMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYSPVIQGNAR
MMAPPAHAQPGLVSSSAAQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTGSLAQQYAH
PNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASPQQQSAIYH
AGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVPQAHVQSGM
VPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQAHHQQQL
NT seq
3417 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcagcagcagcagcagcagccgcccgcggcagccaatgtccgc
aagcccggcggcggcggccttctcacgtcgcctgccgccgcgccgtcggcgtcctcgtcc
tcagtctcgtcgtcctcggccgcggcttcctcctcggcggccgcagcgagcgcaggcggc
gggaggcccggactgggcagaggtcgaaacagtagcaaaggactgcctcagtctacgatt
tcttttgacggaatctatgcaaacatgaggatggttcatatacttacatcggttgttgga
tccaaatgtgaagtacaagtgaaaaatggaggtatatatgaaggagtttttaaaacatac
agtcctaagtgcgatttggtacttgatgctgcacacgagaaaagtacagaatccagttcg
ggcccaaaacgtgaagaaataatggaaagtattttgtttaagtgttctgactttgttgtc
gtacagttcaaagatatggactcgagttatgcaagaagagatgcttttactgactctgct
atcagtgctaaagtgaatggtgaacacaaagagaaggacctggagccctgggatgcgggg
gaactcacaaccaatgaggaactggaggctttggaaaatgacgtgtctaatggatgggat
cccaatgatatgtttcgatataatgaagaaaattatggtgtagtgtctacatatgatagc
agtttatcttcatatacggtgcccttagaaagggataactcagaagaatttttaaaacgg
gaagcaagggcaaaccagttagcagaagaaatcgaatcaagtgcccagtacaaagctcgg
gtggccctggaaaatgatgataggagcgaggaagaaaaatacacagcagttcagagaaat
tccagtgaacgtgaggggcacagcataaacactagggaaaataaatatattcctcctgga
caaagaaatagagaagtcatatcctggggaagtgggagacagaattcaccgcgtatgggc
cagcctggatcgggctccatgccatcaagatccgcttctcacacttcagatttcaacctg
aattctggttcagaccaaagagtagttaatggaggtgttccctggccatcgccttgccca
tctccttcctctcgcccaccttctcgctaccagtcaggtcccaactctcttccacctcgg
gcagccacccctacacggccgccctccaggcccccctcgcggccatccagacccccgtct
cacccctctgctcatggttctccagctcctgtctctactatgcctaaacgcatgtcttca
gaaggacctccaaggatgtccccaaaggcccagcgacaccctcgaaatcacagagtttct
gctgggaggggttccatttccagtggcctagagtttgtatcccacaacccaccaagtgaa
gcagctactcctccagtggcaaggaccagtccctcggggggaacatggtcatcagtggtc
agtggggttccaagattgtcccctaaaactcacagacccaggtcacccagacaaaacagt
attggaaatactcccagtgggccagttcttgcttctccccaagctggaattattccaact
gaagctgttgccatgcctgttccagctgcatctcctacacctgctagtcctgcatctaac
agagctgttaccccttctgttgaggctaaagattccaggcttcaagatcagaggcagaac
tctcctgcagggaataaagaaaatattaagcccagtgaaacatcacctagcttctcaaaa
gctgaaaataaaggtgtatcgccaattatttctgaacatagaaaacagattgatgattta
aagaaatttaagaatgattttaggttacagccaagttctacttctgaatctatggatcaa
ctattaaacaaaaatagagagggagaaaaatcaagagagttgatcaaagacaaaattgaa
tcaagtgttaaggattctttcattgacaatagcagcagcaactgtaccagtggcagcagc
aaggcgaatagccccagcgtttccccttcaatacttagtaacacagagcacaagagggga
cctgaggtcacatcccaaggagttcagacttccagtccagcatgtaagcaagagaaagat
gataaagaagagaagaaagatgcagctgagcaagttaggaaatcaacattgaatcccaat
gcaaaggagttcaacccacgttccttttctcagccaaagccttctaccaccccaacttct
cctcggcctcaagcacaacctagcccatctatggtgggtcatcaacagccgactccagtt
tatactcagcctgtttgttttgcaccaaatatgatgtatccagtcccagtgagcccaggc
gtgcaacctttatacccaatacccatgacgcccatgcctgtgaatcaagccaagacatat
agagcaggtaaagtaccaaatatgccccaacagcggcaagaccagcatcaccagagcacc
atgatgcatccagcctccgcagcaggcccaccgattgtagccaccccaccagcttactcc
acgcaatacgttgcctatagtcctcagcagtttccaaatcagccacttgttcagcatgtg
ccacattatcagtctcagcatcctcacgtctacagtcctgtcatacagggtaacgctagg
atgatggcaccaccagcacatgcccagcctggtttagtgtcttcatcagcagctcagtac
ggagctcatgagcagacacatgccatgtatgcatgtcccaaattaccatacaacaaggag
acaagcccttctttctactttgccatttccacgggctcccttgctcagcagtatgcgcac
cctaacgctaccctgcacccacatactccacatcctcagccttcagccacccccactgga
cagcaacaaagccaacatggtggaagtcatcctgcacccagtcctgttcagcaccatcag
caccaggctgcccaggctctccatctggccagtccgcagcagcagtccgccatctaccac
gcagggctcgcgccaaccccaccttccatgacacctgcctctaatacgcagtcgccacag
aatagcttccccacagcacaacagaccgtctttacgatccatccttctcacgtccagccg
gcatataccaacccaccccacatggcccacgtacctcaggctcatgtacagtcaggaatg
gttccttctcatccaactgcccatgcgccaatgatgctaatgacgacacagccacccggc
ggtccccaggccgccctcgctcaaagtgcactacagcccattccagtctcgacaacagcg
catttcccctatatgacgcacccttcagtacaagcccaccaccaacagcagttgtaa
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