Lemur catta (Ring-tailed lemur): 123626123
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Entry
123626123 CDS
T08326
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcat03009
]
123626123 (DDX55)
Enzymes [BR:
lcat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123626123 (DDX55)
Ribosome biogenesis [BR:
lcat03009
]
Eukaryotic type
Pre-60S particles
Helicases
123626123 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
CTT_SPB4
Helicase_C_2
SBF_like
AAA_22
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
123626123
NCBI-ProteinID:
XP_045390935
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All DBs
Position
21:28032673..28052164
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AA seq
600 aa
AA seq
DB search
MEHVTEGSWEALPVPLDPRVLGALRELGFPYMTPVQSATIPLFMKNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKSQVGAIIITPTRELAIQIDEVLAHFTKHFPQFSQILWIGG
RNPGEDVERFKQQGGNIVVATPGRLEDMFRRKAEGLDLASCVRSLDVLVLDEADRLLDMG
FEASINTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRVSVKEKGVAASSTQKTPS
RLENYYMVCKADEKFNQLVHFLRNHKQEKHLVFFSTCACVEYYGKALEALVKGVKIMCIH
GKMKYKRNKIFMEFRKLQSGILVCTDVMARGIDIPEVNWVLQYDPPSNASAFVHRCGRTA
RIGHSGSALVFLLPMEESYINFLAINQKCPLQEMKLQKSTADLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRLKDLDLASLARGFALLKMPKMPELRGKQFPDFVPVDVN
TDTIPFKDKIREKQRQKLLEQQRKEKTENEGRRKFIKNKAWSKQKAKKEKKKKMNEKRKR
EEGSDIEDEDMEELLNDTRLLKRFKKGKITEEEFEKGLLTSGKRTIKTTDLGISDLEDDG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggagcacgtgacggagggttcctgggaggcgctgccggtgccgctggacccacgggtg
ctgggcgcgctgcgggagctgggcttcccgtacatgacgccggtgcagtctgcaaccatc
cctctcttcatgaaaaacaaagatgtcgccgcagaagcggtcacaggtagtggcaaaaca
ctcgcttttgtcattcccattctggaaattctcctgagaagggaagagaagttaaaaaag
agtcaggttggagccataatcatcacccccactcgagagctggccattcaaatagacgag
gtcctggcacatttcacgaagcacttcccacagttcagccagattctttggatcggtggc
aggaatcctggggaagatgttgagaggtttaagcaacaaggcgggaacattgttgtggcc
acgccaggccgcttggaggacatgttccgaaggaaggccgaaggcttggatctggccagc
tgtgtgcgctccctggatgtcctggtgttggatgaagcagacagacttctggacatggga
tttgaggcaagcataaacaccatcctggagtttttgccaaagcagaggcgaacgggcctt
ttctctgccactcagacgcaggaggtggagaacctggtgagagcaggcctccggaacccc
gtccgggtctcggtgaaggagaagggcgtggcagccagcagcacccagaagaccccctcc
cgcctggagaactactacatggtatgcaaggcagatgagaaatttaatcagctggtacat
tttcttcgaaatcataagcaggaaaagcacctggtcttcttcagcacctgtgcctgtgtg
gagtactacgggaaggctctggaggccctggtgaagggtgtgaagattatgtgcattcat
ggaaagatgaaatataagcgcaataagatcttcatggagttccgcaaattgcagagtggg
attttagtgtgcactgatgtgatggcccgggggatagatattcctgaagtaaactgggtt
ttgcagtacgaccctcccagcaatgcaagtgccttcgtgcatcgctgtggccgcacagcc
cgcattggccacagtggcagtgccctggtgttcctcctgcccatggaagagtcatacatc
aatttccttgcaattaaccaaaaatgtcccctgcaggagatgaagctccagaagagcaca
gctgaccttctgccaaagctcaagtccatggccctggccgacagagctgtgtttgaaaag
ggcatgaaagcttttgtgtcgtatgtccaggcttatgcaaagcatgaatgcaacctcatt
ttcagattaaaggaccttgatcttgccagtctcgctcgaggttttgccctgttgaagatg
cctaagatgccagaactgagaggaaagcagtttccagactttgtgcccgtggatgttaat
acagacactattccatttaaagataaaattagagaaaagcagaggcagaaactattggag
caacaaagaaaagagaaaacagaaaatgaagggagaagaaaattcataaaaaataaagcg
tggtcaaagcagaaggccaaaaaagaaaagaagaaaaaaatgaatgagaaaaggaaaaga
gaagagggttctgatatcgaagatgaggacatggaggaactacttaatgacacaaggctc
ttgaaaaggtttaaaaaaggcaaaattactgaagaagaatttgagaagggattgttgaca
agtggcaaaagaacaatcaagacgacagatttagggatctcagatttggaagatgacggc
tga
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