Lemur catta (Ring-tailed lemur): 123626545
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Entry
123626545 CDS
T08326
Symbol
FDFT1
Name
(RefSeq) squalene synthase isoform X1
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat00100
Steroid biosynthesis
lcat01100
Metabolic pathways
Module
lcat_M00101
Cholesterol biosynthesis, FPP => cholesterol
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
123626545 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lcat01006
]
123626545 (FDFT1)
Enzymes [BR:
lcat01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
123626545 (FDFT1)
Prenyltransferases [BR:
lcat01006
]
Terpene biosynthesis
Squalene/phytoene synthase
123626545 (FDFT1)
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Octopine_DH
Motif
Other DBs
NCBI-GeneID:
123626545
NCBI-ProteinID:
XP_045391561
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Position
22:27685152..27706419
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AA seq
466 aa
AA seq
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MAAAACGTKAMSFFKRTWVRSPAAAPRSAGAGTPPRGCPLSPSAGPCRDRPRGESGCPRL
WSRLSHSCSSASPTAVCLLCPQDSLSSSLKTCYKYLNQTSRSFAAVIEALDGEMRNAVCI
FYLVLRALDTLEDDMTISVEKKVPLLHNFHSFLYEPDWRFMESKEKDRQVLEDFPTISLE
FRNLAKKYQTVIADICRRMGIGMAEFLDKHVTSEQEWDKYCHYVAGLVGIGLSRLFSASE
LEDALVGEDEERANSMGLLLQKTNIIRDYLEDQREGREFWPQEVWGRYVKKLGDFAKPEN
IDLAVQCLNELITNALHHIPDVITYLSRLRNQSVFNFCAIPQVMAIATLAACYNNQQVFR
GVVKIRKGQAVTLMMDATNMPAVKAIIYQYMEEIYHRIPDSDPSSSKTRQIISTIRTQNL
PSCQLISRSHYSPIYLSFVMLLAALSWQYLSTLSQVTEDYVQTGEH
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggccgcagccgcctgcggcaccaaggccatgtccttcttcaagcgcacctgggtgcgg
agccccgccgcggcgcccaggagcgcgggcgcaggcaccccgccgcggggctgccccctg
agcccctccgccgggccctgcagagaccggcctcgcggggagagcggctgccccaggctg
tggagccgcctgtcccactcctgctcctcggcgtctcccaccgccgtgtgtcttctctgc
ccgcaggactcgctcagcagcagcctgaaaacttgctacaagtatctgaatcagaccagc
cgcagtttcgcagccgttatcgaggcgctggatggggaaatgaggaatgccgtatgcata
ttttatctggttctccgagctctggacactctggaagatgacatgaccatcagtgtggaa
aagaaggtcccactgttacacaactttcactctttcctttacgaaccagactggcggttc
atggagagcaaggagaaagatcgacaggtgctggaggatttcccaacgatctccctcgag
tttagaaacctggctaagaaatatcaaacagtgattgctgacatttgccggagaatggga
attgggatggcagagtttttggataaacacgtgacctctgaacaggagtgggacaagtac
tgccactacgttgctgggctggtggggattggcctctcccgtctcttctcggcctcagag
ctcgaagacgccttagttggtgaagatgaagaacgtgccaactcgatgggcctgctcctg
cagaaaacaaacatcattcgggattacctggaagaccagcgagagggaagagagttttgg
ccccaagaggtttggggcaggtatgttaagaagttgggggattttgctaaaccagagaat
attgacttggccgtccagtgcctgaatgaacttatcaccaatgccctgcaccacatccca
gatgtcatcacctacctttcaaggctcagaaaccagagcgtgtttaacttctgtgctatt
ccacaggtaatggccattgctactctggctgcctgttacaataaccagcaggtgttcaga
ggggtggtgaagattcggaaagggcaagcagtgaccctaatgatggacgccaccaatatg
ccagctgtgaaagctataatataccagtatatggaagagatttatcatagaatccccgac
tcggacccatcttctagcaaaacaaggcagatcatctccacgatcaggacgcagaatctt
cccagctgtcagctcatctcccgaagccactactcccccatttacctgtcatttgtcatg
ctcttggccgccctgagctggcagtacctgagcacactctcccaggtcacagaagactat
gtccagactggggagcactga
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