Lemur catta (Ring-tailed lemur): 123627030
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Entry
123627030 CDS
T08326
Symbol
SMG7
Name
(RefSeq) protein SMG7 isoform X1
KO
K14409
protein SMG7
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123627030 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123627030 (SMG7)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
123627030 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
123627030 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
123627030
NCBI-ProteinID:
XP_045392329
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All DBs
Position
23:19281240..19356326
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AA seq
1165 aa
AA seq
DB search
MRNWMFLQIVIVGENVSYKSQMRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWT
SRQALQDLYQKMLVTDLEYALDKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANL
SLFLEAASGFYTQLLQELCTVFNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYIC
QHCLVHLGDIARYRNQTSQAESYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCR
SIAVKFPFPAASTNLQKALSKALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSP
LREKLEEQFKRLLFQKAFNSQQLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQL
LALFMSFLGILCKYPLQNESQEESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWP
WLISLLNSFHPHEEDLSSTNATPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQ
RRIRQQRLISIGKWIADNQPRLIQCENEVGKLLFITEIPELILEDPSEAKENLILQETSV
MESLTADGSPGLKSVLSTGRNLSNNCDTGEKPMVTFKENIKPREMNRDQGRSFPPKEVRR
DYSKGITVTKNDGKKDNNKRKTETKKCTLEKLQETGKQNVAVQVKSQTELRKTPVSEARK
TPVTQTPSQASNSQFIPIHHPGAFPPLPSRPGFPPPTYVIPPPVAFSVGSGYTFPAGVSV
PGTFLQPPAHSPAGNQVQAGKQSHIPYSQQRPSGPGPMNQGPQQSQPPSQQPLTSLPAQP
TAQSTSQLQVQALGQQQSPTKAVSALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGK
IMPVKQPYYLQTQDPIKLFEPSLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVSVPEFYWD
SSYSMADNRAVMAQQANMDRRGKRSPGVFRPEQDPMPRMPFEKSLLEKPSELMSHSSSFL
SLTGFSLNQERYPNNSMFNEVYGKNLTGSSKAELSPSVAPQETSLYSLFEGTPWSPSLPA
SSDHSTPASQSPHSSNPSSLPSSPPTHNHNSVPFSNFGPIGTPDNRDRRTADRWKTDKPA
MGGFGIDYLSATSSSESSWHQASTPSGTWTGRGPSMEDSSAVLMESLKSIWSSSMMHPGP
SALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagaaattggatgttcttgcagatagtcattgtgggagaaaacgtttcatataagtcc
cagatgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcag
gcagaagtcctgaaggctgacatgacagattctaagctgggtccagctgaagtctggaca
tccaggcaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgct
ttagacaagaaagtagaacaggatctctggaatcacgcctttaagaatcagatcacaaca
ctacaaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctt
tctctgttcctagaggcagctagtggcttctatactcagttattacaagaactgtgtaca
gtgtttaatgtagatttaccatgccgtgtgaagtcttcccaactgggaattatcagcaat
aaacagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgc
cagcactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggca
gagtcctactataggcatgcagctcagcttgtcccctccaatggtcagccttacaatcag
ttggctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcaga
agcattgctgtgaagttccctttcccagctgcctccactaatctacaaaaagcactttct
aaagcactggaaagccgggatgaggtgaaaaccaagtggggtgtttctgacttcatcaag
gcctttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccct
cttcgagagaaattggaagaacagtttaagaggctgctattccaaaaagctttcaactct
cagcagttagttcatgtcactgtcattaacctgtttcaacttcatcacctccgtgacttt
agcaatgaaacagagcagcatagttacagtcaagatgaacagctatgttggacacagttg
ctggccctctttatgtcttttcttggcatcctgtgcaagtaccctctccagaacgagtct
caggaggagtcctacaatgcctatcctcttcccgcagtcaaggtctccatggactggcta
agactcagacccagggtctttcaggaggcagtggtggatgaaagacagtacatttggccc
tggctgatttctcttctgaacagtttccatccccatgaagaggatctctcaagtactaat
gctacaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttc
aggaacttggatttttccaaaggccaccagggtattacaggagacaaagagggtcagcag
cgacgaatacgacagcagcgcttgatttctataggcaaatggatcgctgataatcagcca
aggctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagag
ttaatactagaagaccccagtgaagccaaagagaacctcattctgcaagaaacatctgtg
atggagtcgctgactgcagatgggagcccaggactgaaatcagtgctgtctacaggccga
aatctaagcaacaactgtgacacaggagagaagccaatggtcaccttcaaagagaacatt
aagccacgagaaatgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagg
gactatagcaaaggaataactgtaactaagaatgatggaaagaaggacaacaacaagagg
aaaactgaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagaatgtg
gcagtgcaggtaaaatcccagacagaactaagaaagactccagtgtctgaagccagaaaa
acacctgtaactcagaccccaagtcaagcaagtaactcccagttcatccccattcatcat
cctggagccttccctcctcttcccagccggccagggttcccgcccccaacatatgttatc
ccccctcctgtggcattttctgtgggctcaggttacaccttcccagctggtgtttctgtc
ccaggaacctttctgcagcctccagctcactctccagcaggaaaccaggtgcaagctggg
aaacagtcccacattccttacagccagcaacggccctctggaccagggccgatgaaccag
ggacctcaacagtcacagccaccttcccagcagccccttacatctttaccagctcagcca
acagcacagtccacaagccagttgcaggttcaagctctaggtcagcaacaatcccctaca
aaagccgtgtcggctttggggaaaagcccgcctcaccactctggattccagcagtatcaa
caggcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattagggaaa
attatgcctgtgaaacagccctactaccttcagacccaagaccctataaaactgtttgag
ccgtcattgcaacctcccgtaatgcagcagcagcctttagagaaaaaaatgaagcctttt
cccatggagccatataaccataatccctcagaagtcagcgtcccagaattctactgggat
tcttcgtacagcatggctgataacagagctgtcatggcacagcaagcaaatatggaccgc
aggggcaaacggtcaccaggagtcttccgtccagagcaggatcctatgcccaggatgcca
tttgagaaatccttattggagaaaccctcggagctaatgtcacattcatcctctttcctg
tcccttaccggattctctctcaatcaggaaagatacccaaataacagtatgttcaatgag
gtatatgggaaaaacctgacaggcagctccaaagcggaactcagcccctcagtggcgccc
caggaaacatctctgtattcccttttcgaagggactccgtggtctccatcacttcctgcc
agctcagatcattcaacaccagccagccagtctcctcattcctctaacccaagcagcctg
cccagctctcctccaacacacaaccataattctgttccattctccaattttggacccatt
ggaactccagataacagggataggaggactgcagatcggtggaaaactgataagccagcc
atgggtgggtttggcattgattatctctcagcaacgtcatcctcagagagcagctggcat
caggccagcactccaagtggcacctggacaggccgtggcccctccatggaggattcctct
gccgtcctcatggaaagcctaaagtctatctggtccagttccatgatgcatcctggacct
tccgctctggagcagctattaatgcagcagaagcagaaacagcagcggggacaaggcacc
atgaaccctccacactga
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integrated database retrieval system