Lemur catta (Ring-tailed lemur): 123628370
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Entry
123628370 CDS
T08326
Symbol
HDAC6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04613
Neutrophil extracellular trap formation
lcat05014
Amyotrophic lateral sclerosis
lcat05034
Alcoholism
lcat05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
123628370 (HDAC6)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
123628370 (HDAC6)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
123628370 (HDAC6)
09165 Substance dependence
05034 Alcoholism
123628370 (HDAC6)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcat01009
]
123628370 (HDAC6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123628370 (HDAC6)
04131 Membrane trafficking [BR:
lcat04131
]
123628370 (HDAC6)
03036 Chromosome and associated proteins [BR:
lcat03036
]
123628370 (HDAC6)
Enzymes [BR:
lcat01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
123628370 (HDAC6)
Protein phosphatases and associated proteins [BR:
lcat01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123628370 (HDAC6)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
123628370 (HDAC6)
Membrane trafficking [BR:
lcat04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
123628370 (HDAC6)
Chromosome and associated proteins [BR:
lcat03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
123628370 (HDAC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
123628370
NCBI-ProteinID:
XP_045394018
LinkDB
All DBs
Position
X:57685151..57706113
Genome browser
AA seq
1207 aa
AA seq
DB search
MTSTGQDSTTNRHRRSRHNPQSPPHHSSVTSSSVTSKRSIKKGAVPRSSPNLAEVKKKGK
MKKLRQGTEDLIVGLQGMDLNLEAKPLSGTGLVLDDQLNEFHCLWDDSFPEGPERLHAIK
EQLVQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNERELHTLADTYDSVYL
HPNSYTCACLASGSVLRLVDAVLGAEIRNGMAIVRPPGHHAQHSLMDGYCMFNHVAVAAR
YAQKKHGIKRILIVDWDVHHGQGTQFTFNQDPSVLYFSIHRYEQGRFWPHLKASNWSTTG
FGEGQGYTINVPWNQVGMRDADYIAAFLHLLLPVTLEFQPQLVLVAAGFDALQGDPKGEM
AATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSASLHTLLGDPCPMLDSPGAP
CPSAQASLSCALEALEPFWEVLVRPAEPIEEDNVEEDDMEENEEEGPWEPPVLPILTWPV
LQARTGLVYDKRMMSHYNLWDNHHPEMPQRISRIMCRLEELGLVERCLVLPMRPATNAEL
LTCHSAEYMGRLRATEKMKSRELHRESSNYDSIYICPSTFTCARLAAGAACCLVEAVLSG
EVLNGIAVVRPPGHHAEQDAACGFCFFNSVAVAARHAQAISGRALRILIVDWDVHHGNGT
QHMFEDDPSVLYVSLHRYDHGTFFPMGDEGASSQIGRALGTGFTVNVAWNGPRMGDADYL
AAWHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGYQVSPEGYAHLTHLLMGLANGRIIL
ILEGGYNLTSISESMAACTRSLLGDPLPLLALPRPPLSGALASITETIQVHRRYWRSLRV
TKVEDKEAPSSSKSVTKKAPKPANPGPAEGMTTPEEKVLEAGMGMATSALSAEESTPGQT
KSEIAVVALTQDRSSEAAKGRAVLGQTTAEQAVGGATLDQTTSEETVGGATLGQTTSEKA
VGGATLDQATSEEAVGGASLDQTTSEAAMEGATLDQTTSGEVMGGAQLIQTPLASCRDNQ
NPPTIPVQGATPQISPSKLIGSLRTLELGKKSQEDPDSQTPEEESLLGEAAGGQDMDDLI
LMQRAGDLTGTDQAMFYAVTPLPWCPHLVAVCPIPTAGLDVTQPCGDCGSLQENWVCLCC
YQVYCGRYINGHMLQHHGDSGHPLVLSYVDLSTWCYHCQAYVHHQALLDVKNIAHQNKFG
EDMPHPH
NT seq
3624 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaggattccaccacaaacaggcatcgaaggagtagacacaacccc
caatcgccccctcaccattccagtgtcacctcttccagtgtcacctcgaagcgaagcatt
aaaaagggtgccgtaccccgctccagccccaatctagcagaggtaaagaagaaaggcaaa
atgaagaagctccgccaagggactgaagacctaatcgtggggctgcaagggatggatctg
aaccttgaggccaagccactgtctggcactggcttggtgttggatgaccaactaaatgaa
ttccactgcctctgggatgacagcttccctgaaggccctgagcggctccatgccatcaag
gagcagctggtccaggagggcctcctagatcgctgtgtgtcctttcaggcccggttcgct
gaaaaggaagaactgatgttggttcacagcctggaatacattgatctgatggagacaacc
cagtacatgaacgagcgagaactccacacgctagcagacacctatgactcagtttatctg
catccgaactcatacacctgtgcctgcctggcctcgggctctgtcctcaggctagtggat
gcagtcctgggggctgagatccggaatggcatggccatcgtcaggcctcctggacaccac
gcccagcacagtcttatggatgggtattgcatgttcaaccatgtggctgtggctgcccgc
tatgctcaaaagaagcatggcatcaagaggatccttatcgtggattgggatgtacatcat
ggtcagggaacacagttcaccttcaaccaggaccccagtgtcctctatttctccatccat
cgctatgaacagggtaggttttggccccaccttaaggcctctaactggtccaccacaggt
tttggcgaaggccaaggatacaccatcaatgtgccttggaaccaggtggggatgcgggat
gctgactacattgccgctttcctgcacctcctgctgccagtcacccttgagttccagcct
cagctggtcctggtggctgctggatttgatgccctccaaggggaccccaagggcgagatg
gctgccactccagcagggttcgcccagctaacccacctgctcatgggtctggcaggaggc
aagctgatcctgtccctggagggtggctacaacctccgctcactggctgaaggtgtcagt
gcctcgctccacaccctcctgggagatccttgccccatgctggattcccctggtgccccc
tgcccgagtgcccaggcttccctctcctgtgctctggaagccctcgaacccttttgggag
gtccttgtgagaccagctgagcccattgaggaggacaacgtagaggaggacgacatggag
gagaacgaggaggagggaccttgggagccccctgtgctcccaatcttgacgtggccagtg
ctgcaggcccgcacagggctggtctatgacaaacgcatgatgagtcactacaacttatgg
gacaaccaccaccctgagatgccccagcgcatctcgcgtatcatgtgccgcctggaggag
ctgggccttgtcgagcgctgcctcgtcctgcccatgcggcctgccaccaacgctgagctg
ctcacctgccacagtgctgagtacatgggtcgtctccgggccacggagaagatgaaatcc
cgggagctgcaccgtgagagctccaactacgactctatctacatctgccccagcaccttt
acatgtgcgaggctggctgccggtgctgcctgctgcctggtggaggctgtgctctcagga
gaggttttgaacggtattgctgtggtgcgccccccaggacaccacgccgagcaggacgca
gcctgtggtttctgctttttcaactctgtggctgtggctgctcgccatgcccaggccatc
agtgggcgtgccctgcggatcctgattgtggattgggatgtccatcatggtaatggaact
cagcacatgtttgaggatgaccccagtgtgctatacgtgtccctgcaccgctatgatcat
ggcaccttcttccccatgggggatgagggcgccagcagccagataggacgggccttaggc
acaggcttcactgtcaacgtggcctggaatgggccccgcatgggtgatgctgactacctg
gctgcctggcatcgtctggtgcttcccattgcctacgagtttaacccagaactggtgctg
gtctctgctggctttgacgcggcacggggcgaccccctggggggctaccaggtgtcacct
gagggttatgcccacctcacccacctgctgatgggccttgccaatggccgcattatcctt
atcctagagggtggctataacctgacatccatctccgagtccatggctgcctgcacccgc
tccctccttggagatccactacccctgctggccctgccacggcccccactatcaggggcc
ctggcctcaatcactgagaccatccaagtccatcgcagatactggcgcagcttgcgggtc
acgaaggtagaagacaaggaagcaccctccagttctaagtcagtcaccaagaaggcaccc
aaaccagccaatcctgggccagctgaggggatgaccacaccggaagagaaagttctggaa
gcaggcatggggatggccacctcagcattatctgcggaagagtccaccccaggccagact
aagtcagagatagccgtggtggcgctcactcaggaccggtcctcagaggcagccaagggg
agagctgtgctgggccagaccaccgcagagcaggctgtggggggagccactctggaccag
accacctcggaggagactgtgggaggagccaccctgggccagaccacctcagagaaggct
gttgggggagccacgctggaccaggctacctcagaggaggctgtaggaggagcttcgcta
gaccagaccacctcagaggcagccatggagggagccaccctggaccagaccacctcaggg
gaggttatggggggtgcccaactgatccaaactcctctagcctcatgcagagacaaccag
aaccccccaaccatacctgtgcagggagccacaccccagatatcccccagtaagctgatt
gggagtctcaggaccctggaactgggcaagaaatctcaggaggacccagactctcagacc
ccagaagaggagagcctactcggagaggcagctggaggtcaggacatggatgatttgatt
ctgatgcagagagctggggaccttactggcactgatcaggccatgttttatgcagtgaca
ccactgccctggtgtccccatttggtggcagtatgccccatacctacagcaggcctggat
gtgactcaaccttgtggggactgtggatcactccaggagaactgggtgtgtctatgttgc
tatcaggtctactgcggtcgttacatcaatggccatatgcttcagcaccacggagactct
ggacacccgctggttctcagctacgttgacctgtctacctggtgttatcattgtcaggcc
tatgtccaccaccaggctctcctagatgtgaagaacatcgcccaccagaacaagtttggg
gaggacatgccccacccacactaa
DBGET
integrated database retrieval system
