Lemur catta (Ring-tailed lemur): 123630130
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Entry
123630130 CDS
T08326
Symbol
TRPC1
Name
(RefSeq) short transient receptor potential channel 1 isoform X1
KO
K04964
transient receptor potential cation channel subfamily C member 1
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04360
Axon guidance
lcat04724
Glutamatergic synapse
lcat04726
Serotonergic synapse
lcat04929
GnRH secretion
lcat04972
Pancreatic secretion
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09152 Endocrine system
04929 GnRH secretion
123630130 (TRPC1)
09154 Digestive system
04972 Pancreatic secretion
123630130 (TRPC1)
09156 Nervous system
04724 Glutamatergic synapse
123630130 (TRPC1)
04726 Serotonergic synapse
123630130 (TRPC1)
09158 Development and regeneration
04360 Axon guidance
123630130 (TRPC1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcat04040
]
123630130 (TRPC1)
Ion channels [BR:
lcat04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
123630130 (TRPC1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRP_2
Ion_trans
Ank_2
Ank_4
LHD_TRPY1
MTR4-like_stalk
RIN1
Motif
Other DBs
NCBI-GeneID:
123630130
NCBI-ProteinID:
XP_045395348
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All DBs
Position
1:174372212..174443790
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AA seq
843 aa
AA seq
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MTFGANGPHAEAAVGTTHPFSSPGAGLGSGSGPVGAPPPSPGLPPSWAAMMAALYPSTDL
SGASSSSLPSSPSSSSSPNEVMALKDVREVKEENTLNEKLFLLACDKGDYYMVKKILEES
SSGDLNINCVDVLGRNAVTITIENENLDILQLLLDYGCQSADALLVAIDSEVVGAVDILL
NHRSKRSSRPTVVKLMERIQNPEYSTTMDVAPVILAAHRNNYEILTMLLKQDVSLPKPHA
VGCECTLCSAKNKKDSLRHSRFRLDIYRCLASPALIMLTEEDPILRAFELSADLKELSLV
EVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRGLLEERMNLSRL
KLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYLI
APKSQFGRIIHTPFMKFIIHGASYFTFLLLLNLYSLVYNEDKKNTMGPALERIDYLLILW
IIGMIWSDIKRLWYEGLEDFLEESRNQLSFVMNSLYLATFALKVVAHNKFHDFADRKDWD
AFHPTLVAEGLFAFANVLSYLRLFFMYTTSSVLGPLQISMGQMLQDFGKFLGMFLLVLFS
FTIGLTQLYDKGYTPKEQKDCVGIFCEQQSNDTFHSFIGTCFALFWYIFSLAHVAIFVTR
FSYGEELQSFVGAVIVGTYNVVVVIVLTKLLVAMLHKSFQLIANHEDKEWKFARAKLWLS
YFEDKCTLPPPFNIIPSPKTICYMISSLSKWICSHTSKGKVKRQNSLKEWRNLKQKRDEN
YQKVMCCLVHRYLTSMRQKMQSTDQATVENLNELRQDLSKFRNEIRDLLGFRTSKYAMFY
PRN
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcggggccaacgggcctcacgctgaggcggccgtgggaacgactcatcccttt
tccagccctggggcggggctggggtcggggtcggggccggtgggggccccgcccccgtct
cctggcctgcccccttcatgggcggcgatgatggcggccctgtacccgagcacggacctc
tcgggagcgtcctcctcctccctgccttcctccccatcctcctcttcgtcgcctaacgag
gtgatggcgctgaaggatgtgcgggaggtgaaggaggagaacacactgaatgagaagctt
ttcttgctggcgtgcgacaagggtgattattatatggttaaaaagattttggaggaaagc
agttcaggtgacttgaacataaattgcgtagatgtgcttgggagaaatgctgttaccata
actattgaaaacgaaaacttggatatactgcagcttcttttggactacggttgtcagtct
gcagatgcacttttggtggcaatcgactctgaagtagtgggagctgttgatatactactt
aatcatcgatcaaaacgatcatcaagaccaactgtagtaaaactaatggaacgaattcag
aatcctgagtattcaacaactatggatgttgctcctgtcattttagctgctcatcgtaac
aactatgaaattctcacaatgctcttaaaacaggatgtatctctacccaagccccatgca
gttggctgtgaatgcacattgtgttctgcaaaaaacaaaaaggacagcctgcgacattcc
aggtttcgtcttgatatatatcgatgtttggccagtccagctctaatcatgttaacagag
gaagatccaattctgagagcatttgaacttagtgctgatttgaaagaactaagccttgtg
gaggtggaattcaggaatgattatgaggagctagcccggcaatgtaaaatgtttgctaaa
gatttgctcgcacaagcccgaaattcacgtgaattggaagttatcctaaatcatacatct
aatgatgagcctcttgataaacgaggattactagaagaaagaatgaatttaagtcgtcta
aaacttgctatcaaatataaccaaaaagagtttgtctcccagtctaactgccagcagttc
ctgaacactgtttggtttggacagatgtcaggttaccgacgtaagcccacctgtaagaag
atcatgactgttttgacagtaggcatcttttggccagttttgtcactttgttatttgata
gctcctaaatctcaatttggcagaatcattcacacaccttttatgaaatttattattcac
ggagcatcatatttcacattcctactgttactaaatctatattctcttgtctacaatgag
gataaaaaaaacacaatggggccagcccttgaaagaatagactatcttcttatactgtgg
attattggaatgatttggtcagacattaaaagactttggtatgaagggctggaagacttt
ttagaagaatctcgtaatcaactcagttttgtcatgaattccctctatttggcaaccttt
gccctcaaagtggttgctcacaataagtttcatgattttgctgatcggaaggattgggat
gcattccatcctacactggtggcagaagggctttttgcatttgcaaatgttctgagttat
cttcgtctcttttttatgtatacaaccagttctgtcttgggtccattacagatttcaatg
ggacagatgttacaagattttggaaaatttcttgggatgttccttcttgttttgttttct
ttcacaattggactgacacaactgtatgataaaggctatactccaaaagaacagaaggac
tgtgtaggcatcttctgcgaacagcaaagcaatgataccttccattcgttcattggcact
tgctttgctttgttctggtatattttctctttagcacatgtggcaatctttgttacaaga
tttagctatggagaagaattgcaatcctttgttggagccgttattgttggtacatacaac
gtcgtggttgtgatcgtgcttaccaagctgctggtagcaatgcttcataaaagttttcag
ttgatagcaaatcatgaagacaaagagtggaagtttgctcgagcaaagttgtggcttagc
tactttgaggacaaatgtacattacccccacctttcaacatcattccttcaccaaagact
atctgctatatgattagtagcctcagtaagtggatttgttctcatacctcaaaaggcaaa
gtcaaacggcagaacagtttaaaggaatggagaaatttgaaacaaaagagagatgaaaac
taccaaaaagtgatgtgctgcttagtgcatcgttacttgacttccatgagacagaagatg
caaagtacagatcaggcaactgtggaaaatctaaacgaactacgccaagatctgtcaaaa
ttccgaaatgaaataagggatttacttggctttcggacttctaaatatgctatgttttat
ccaagaaattaa
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