Lemur catta (Ring-tailed lemur): 123630302
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Entry
123630302 CDS
T08326
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04390
Hippo signaling pathway
lcat04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
123630302 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
123630302 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lcat03000
]
123630302 (SOX2)
Transcription factors [BR:
lcat03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
123630302 (SOX2)
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
123630302
NCBI-ProteinID:
XP_045395708
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Position
1:207142725..207145245
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AA seq
320 aa
AA seq
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MYNMMETELKPPGPQQTSGGGGGGGGNSTAAAAGGNQKNSPDRVKRPMNAFMVWSRGQRR
KMAQENPKMHNSEISKRLGAEWKLLSETEKRPFIDEAKRLRALHMKEHPDYKYRPRRKTK
TLMKKDKYTLPGGLLAPGGNSMASGVGVGAGLGAGVNQRMDSYAHMNGWSNGSYSMMQDQ
LGYPQHPGLNAHGAAQMQPMHRYDVSALQYNSMTSSQTYMNGSPTYSMSYSQQGTPGMAL
GSMGSVVKSEASSSPPVVTSSSHSRAPCQAGDLRDMISMYLPGAEVPEPAAPSRLHMSQH
YQSGPVPGTAINGTLPLSHM
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgatggagacggagctgaagccgccgggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcaactccaccgcggcggcggcgggcggcaaccagaagaacagc
ccggaccgcgtcaagcggcccatgaacgctttcatggtgtggtcccgcgggcagcggcgc
aagatggcccaggagaaccccaagatgcataactcggagatcagcaagcgcctgggcgcc
gagtggaaacttttgtcggagacggagaagcggccgttcatcgacgaggccaagcggctg
cgagcgctgcacatgaaggagcacccggattataaataccggccccggcggaaaaccaag
acgctcatgaagaaggataagtacacgctgcccggcgggctgctggcccccggcggcaac
agcatggcgagcggggtcggggtgggcgccggcctgggcgcgggcgtgaatcagcgcatg
gacagttacgcgcacatgaacggctggagcaatggcagctacagcatgatgcaggaccag
ctgggctatccgcagcacccgggcctcaacgcgcacggcgccgcgcagatgcagcccatg
caccgctacgacgtgagcgccctgcagtacaactccatgaccagctcgcagacctacatg
aacggctcgcccacctacagcatgtcctactcgcagcagggcacccctggcatggctctt
ggctccatgggttcggtggtcaagtccgaggccagctccagcccccctgtggttacctct
tcctcccactccagggcgccctgccaggccggggacctccgggacatgatcagcatgtac
ctccccggcgccgaggtgccggaacccgccgcccccagcagacttcacatgtctcagcac
taccagagcggcccggtgccgggcacggccattaacggcacactgcccctctcgcacatg
tga
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