Lemur catta (Ring-tailed lemur): 123630342
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Entry
123630342 CDS
T08326
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
123630342 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcat04131
]
123630342 (VPS8)
Membrane trafficking [BR:
lcat04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
123630342 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
TPR_Vps41
zf-RING_Vps41
WD40_CDC20-Fz
zf_RING_Vps8_fungal
Clathrin
zf-RING_11
zf-C3H2C3
zf-RING_2
zf-RING_5
zf-RING_UBOX
Beta-prop_WDR3_1st
UBA_HOIP
PHD
Beta-prop_WDR5
EIF3I
zf-C3HC4
GED
Motif
Other DBs
NCBI-GeneID:
123630342
NCBI-ProteinID:
XP_045395798
LinkDB
All DBs
Position
1:209692660..209908597
Genome browser
AA seq
1426 aa
AA seq
DB search
MENEPDHENVEQSLCAKTTEEELNKSFNLEASLSKFSYIDLDKELEFKNDLIDDKEFDIP
QVDTPPTLESILNETDDEDESFVLEDPTLLNIDTIDSHSYDTSSVASSDSGDRTNLKRKK
KLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFDQ
NQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAKGQITMWDLASGKLLRSITDAHP
PGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPLH
SKPELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAVH
NYVNPMLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSVE
KLHVIDRQTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYGG
QIFYLGTKSVYVMMLRSWRERVDHLLKQDCLTEALALAWSFHEGKAKAVVGLSGDASKRK
AVVADRMVEILFHYADRALKKCPDQGKIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMY
DKLSENSVAKGVFLECLEPYILSDKLMGITPQVMKDLIVHFQDKKLMENVEALIVHMDIT
SLDIQQVVLMCWENHLYDAMIYVYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVVMG
NKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYVRTLLH
FDTREFLNVLALTFEDFKNDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQL
AKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEK
AEFYQICEFMYEREHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAM
DHIEELVSLKPCKAAELVATHFSGQIETVIKKLQNQILLFKFLRSLLDPREGIHVNQESL
QISPCITEQFIELLCQFNPNQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDI
HGAFLIMLERLQSKLQEITHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQREAL
WFPLLEAMMAPQKLSSSAVPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKG
KLGEIQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICL
QQYKRRQEMADEIIVFSCGHLYHAFCLQNKECTTEIEGQTRWTCYKCSSSNKVGKLSENS
SEIKKGRITPSQVKMSPSYHQSKGDPTAKKATSEPILDPQQIQAFDQLCRLYRGSSRLAL
LTELSQNRSSESYRLFSGSQSSPAFNSIFQNENFQLQLIPPPVTED
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgaaccagaccatgaaaatgtggaacagagcctctgtgccaagactactgaa
gaagaactgaataagtctttcaatctagaagcttcactttcaaaattctcttacatagat
ctggacaaggaactggagttcaaaaatgatctgattgatgacaaggagtttgatattcct
caagttgatactcctccaacactggaaagcatactaaatgagactgatgatgaagatgag
tcttttgttcttgaggatcctacattgttaaacattgatactattgattctcactcatat
gatacttcatctgtggcaagctcagacagtggtgacaggaccaacttaaaaaggaagaag
aaattacctgattctttttcactccatggatcagttatgcgacattcacttttgaaggga
atttctgcccagatagtatctgcagctgacaaagtagatgctggcttgcccacagcaatt
gcagtgtccagtctgatagcagtgggtacatctcatggactggctttaatatttgatcag
aatcaagcattgcgactctgtctgggtagcactagtgttggaggtcagtacggagccatc
tctgccctcagtatcaacaatgactgctcgagacttctttgtggcttcgctaaaggtcag
atcaccatgtgggatttggccagtggaaaacttctaagatcaataacagatgctcatcct
ccaggaacggcaatattgcatatcaagtttacagatgacccaactcttgcaatttgcaac
gacagcggaggctctgtttttgaattgacatttaagagagtgatgggagtgagaacatgt
gaatctagatgtctcttcagtggttccaaaggtgaagtttgctgtattgagcctctacat
tctaagcctgaactgaaagatcatcccatcacacagttttcattattggccatggcatcc
ttaacaaagatactggtcattggtttgaaaccatccttgaaagtgtggatgacttttcca
tatggtcggatggatccttccagtgttccattgctggcctggcactttgtggcagtgcat
aattatgtgaatcccatgcttgccttctgcagaggggatgttgttcattttctgttggtt
aagagagatgaatctggagctatacatgttacaaagcaaaagcatcttcacctgtactat
gacctcatcaactttacttggataaactcacgcacaattgtgctcttagacagtgtagag
aagttgcatgtgattgatcggcaaactcaagaggaattggaaacggtggaaatatcagaa
gttcagttggtctataacagcagccatttcaaatcactagccacgggaggaaatgttagc
caggcactggctttggttggagagaaggcttgttatcaatccatcagtagctatggtggt
cagatcttttatttggggacaaaatctgtttatgtgatgatgctgaggagctggagagag
agagtggatcatctcctgaaacaagattgtcttacggaagccttggctcttgcgtggtct
ttccatgaaggaaaagcaaaagcagttgtgggattatcaggagatgccagcaagcgaaaa
gctgttgttgcagaccggatggtagaaatcctattccattatgcagatcgagctctgaaa
aagtgtccagaccaaggaaaaatccaggtgatggagcagcattttcaggacatggtgcct
gtcatagttgattactgccttctgctgcaacgaaaggatctcttatttagccagatgtat
gacaaattaagtgagaattcagtggccaaaggagtgtttttggagtgccttgagccatat
attttaagtgataaattgatgggtatcacaccccaggtaatgaaagacttgatcgttcat
ttccaagataagaagttaatggaaaatgtagaagcccttattgtacatatggatattacc
agcctggatattcagcaggtagttcttatgtgttgggaaaatcatttatatgacgctatg
atctacgtctacaacagaggcatgaatgaatttattagtccgatggagaaacttttcaga
gtcattgctcctcctctgaatgcaggaaaaacgctaacagatgaacaagttgttatggga
aacaagcttcttgtctatattagctgttgtttagcaggtcgtgcctatccccttggtgac
atccctgaagatcttgttcctttggttaaaaatcaggtttttgaatttctaattcgccta
cattcagcagaagcttcccctgaggaagaaatctatccttatgttcggactttactacat
tttgatacaagagaatttctaaatgtattggcactgacttttgaagattttaaaaatgac
aagcaagctgtggaatatcaacagcgaattgtggatattttgttgaaagttatggtggag
aattcagattttactccctcgcaagtagggtgtctctttacattcctcgctcggcagctt
gcaaagcctgacaataccttattcgtaaatagaacactttttgatcaggtccttgaattt
ctctgtagtcctgacgatgactcccgacactctgaaagacagcaggtccttttagaattg
ctgcaggctggaggcatagttcaatttgaagagagtcgtctcatccgtatggcagaaaaa
gctgagttctatcaaatttgtgaattcatgtatgaacgagaacaccaatatgacaaaatt
attgattgctacttacgtgacccattgagagaggaggaagtctttaattacattcacaat
atcttatccattcctggacacagtgcagaggaaaagcagtctgtatggcagaaagcaatg
gatcatattgaggaacttgtgtctctgaagccctgtaaagctgcggagctggttgctacc
cacttttctggacagattgaaacagtcattaaaaaacttcagaaccagattttgcttttc
aaatttttgaggagtcttcttgacccaagggaaggtattcatgtaaatcaagaatcgctg
caaatatctccgtgtattacagaacagttcattgagctgttgtgtcagttcaacccaaac
caagttatagaaacgctgcaagtccttgagtgctaccgcctagaagaaactattcagatt
actcagaagtatcaacttcatgaagtcactgcttatctattagaaaagaaaggagatatt
catggtgcctttttaataatgttagagcgactacagagcaaacttcaagagataacacat
caaggtgaaaataccaaagaggatccctcacttaaggatgttgaagatactatggtagag
acaattgctctttgccagagaaattcacataatttgaaccagcagcaacgagaggcactc
tggtttccattattggaggcaatgatggcccctcagaagctgtctagttcagctgtccct
catctacactctgaagccctgaaatctttgaccatgcaagttctaaacagcatggcagca
tttattgcccttccatcaatcttgcaaagaatcttacaggatccagtttatggaaaagga
aaacttggagaaatccagggacttattctgggcatgttagatacctttaactatgaacaa
actctgctggaaacaacaactagccttctaaaccaagatctccattggtcactgtgtaac
cttagagcttcggtcacgagaggactgaatcccaaacaggattattgctctatatgtttg
cagcagtacaagagacgccaagaaatggctgatgaaattattgtgtttagctgtggccat
ttgtatcacgcattctgtctacaaaacaaagaatgcaccacagaaattgagggccaaaca
agatggacatgctacaagtgcagctcaagtaacaaagtaggaaaactaagtgaaaattca
tctgaaattaaaaagggaaggataaccccatcacaggtaaaaatgtctccatcttatcat
cagtctaaaggggatcctacagctaagaaggcaacctcagaacctattctggatccacag
caaatccaagcatttgatcagctttgccgtctctaccgaggaagttccaggttggctctc
cttacggaactctcccagaatcgcagcagtgagagctacaggctgttcagtggctcccag
agcagcccggctttcaacagcatcttccagaatgagaacttccagctgcagctcattccc
ccgcccgtgactgaggactga
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integrated database retrieval system
