Lemur catta (Ring-tailed lemur): 123632375
Help
Entry
123632375 CDS
T08326
Name
(RefSeq) MHC class II transactivator-like isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat04612
Antigen processing and presentation
lcat05145
Toxoplasmosis
lcat05152
Tuberculosis
lcat05164
Influenza A
lcat05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
123632375
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
123632375
09171 Infectious disease: bacterial
05152 Tuberculosis
123632375
09174 Infectious disease: parasitic
05145 Toxoplasmosis
123632375
09163 Immune disease
05340 Primary immunodeficiency
123632375
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lcat01001
]
123632375
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lcat04054
]
123632375
Enzymes [BR:
lcat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
123632375
Protein kinases [BR:
lcat01001
]
Serine/threonine kinases: Other
TAF1 family
123632375
Pattern recognition receptors [BR:
lcat04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
123632375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
LRR_8
LRR_14
nSTAND_NTPase5
nSTAND1
WWE_4
AAA_16
LRR_9
Motif
Other DBs
NCBI-GeneID:
123632375
NCBI-ProteinID:
XP_045398540
LinkDB
All DBs
Position
2:7598795..7637628
Genome browser
AA seq
1128 aa
AA seq
DB search
MRCLAPRPAGSYLSEPQGSAQRAGMELGALEGGYLELLNSNADPWHLYHRYDWMDLAAEE
EIELFSEPDTDTINCDQFSSLLCDMEGDEETRETYANIAELDQYVFQDSQLEGLSKDIFI
EHIGSDEAIGDSVEVPAEVGQKSQKRPFPEELPADLKHRKLAEAPAMPMVTGSFLVGPVS
DSSALPFLPPPALFNQEPACGQTRLEETVQMPTAPSWSSVSCLNLPAGPIQLISTLPALP
QGLWQISGVGVSSVFIYQGEMPQARQAPPSSGPAIHSLPKSPDRPGSTSPFAPSAADLPS
MPEPALTSHADVTEGEMSPTQCQADEEVSNKLPKWPGPVERFCRSLQEEYRAEPPGPDGI
LVPVDLVRAGLERTSSKSQEWALATPDWAERQLAQGGLAEVLLAARERRRPRETRVVAVL
GRAGQGKSCWARAVSRAWARGQLPQYDFVFHVPRHAVDRPGDAYCLRDLLFSLGPRPLEA
DDEVLSYILRRPDRVLLILDAFEELEAQEGLLHSAAAAEPCSLRALLAGLLQRKLLRGCT
LLLTARPRGRPAQSLGKADALFEMAGFSTEQARAYVSRYFECSGAAEHRDRALALLRDQP
FLLSHGHSPTVCRAVCQLSEALLEQGQGARLPATLTGLYVGLLGPAVRDGPPGALAELAK
LAWELGRRRQGTLREDRFPSVEVRTWAVAKGLVRPAPGAAVAELAFSSFLLQCFLGAVWL
ALSSEIKSKELPQYLALTPRKKRPYDNWLEGTPRFLAGLIFQPRTRCLGALAGPAEAALA
DRKRKVLTRYLKQLQPGTLRARRLLELLHCAHEAQEAGIWQHVVQELPTRLSFLGTRLTP
PDAHVLGRALEAAGRDFSLDLRSTGIDPSGLGNLVGLSCVTRFRAALSDTVGLWESLQQR
GETRLLQAAEEKFTIEPFKAKSPKDVQDLGNLVQTQRTRSSSEDTAGELPAVRDLKKLEF
ALGPIAGPQAFPKLVRILPAFSSLQHLDLDSLSENKIGDEGVAQLSATLPQLKALETLNL
SQNSITDVGACKLAEALPSLAVSLLRLSLYNNCICDAGAESLARVLPDMVSLRVMDVQYN
KFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVQEHLKQLDSRISLR
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgcctggctccacgccctgctgggtcctacctgtcagagccccaaggcagtgca
cagcgtgcaggcatggagttgggggcgctagaaggcgggtacctggagcttctcaacagc
aatgctgacccctggcacctataccaccgctatgactggatggacctggctgcagaagaa
gagattgagctcttttcagaacccgacacagacaccatcaactgcgaccagttcagcagc
ctgctgtgtgacatggaaggtgacgaagagaccagggagacttatgccaatattgcggag
ctggaccagtacgtgttccaagactcccagctggaggggctgagcaaagacattttcata
gagcacataggatcagatgaagcgatcggtgacagtgtggaggtgccagcggaagtggga
cagaaaagtcagaaaagacccttcccagaggagcttcctgcagacctgaagcaccggaag
ctggccgaggcccctgctatgcccatggtgactggcagtttcctggtggggccagtgagc
gactcctctgccctgcccttcctgccgccacctgctctgttcaaccaggagccagcgtgc
ggccagacccgcctggaagaaaccgtccagatgcccacggctccttcctggtcctcggtg
agctgcttgaacctccctgccggacccatccagttgatctccactctccccgctctgccc
caggggctctggcaaatctcaggggtcggggtgtccagtgtcttcatctaccagggtgag
atgccccaggccagacaagcacccccttccagcggcccagctatccacagcctccccaag
tccccagaccggcccggctccaccagccccttcgctccctctgcagctgatctgcccagc
atgcctgagcctgccctgacctcccatgcagatgtgacagagggcgaaatgtcccccacc
caatgccaggcagacgaggaggtttccaacaagcttcccaaatggcctgggccggtggag
cggttctgtcgctcgctgcaggaggagtaccgggcggagcccccaggccccgacggcatc
ctggttccggtggacctcgtgagggccgggctggagaggaccagcagcaagagccaggag
tgggcgctggccaccccggactgggcggagcggcagctggcccaggggggcctggccgag
gtgctgctggcggccagggagcgccggcggccgcgtgaaacgcgggtggttgccgtgctg
ggcagggccgggcagggcaagagctgctgggctcgcgccgtgagccgggcctgggcccgc
gggcagctcccgcagtacgacttcgtcttccacgtgccccgccacgccgtggaccgtccg
ggggatgcctactgcctgcgggacctgctcttctccctgggcccacggccgctcgaggcg
gacgacgaggtcctcagctacatcctgagaaggcccgaccgcgtcctgctcatcctggac
gccttcgaggagctggaggcccaggagggccttctgcacagcgcggcggccgcggagccc
tgctccctccgggcgctgctggccgggctcctccagcggaagctgctgcggggctgcacc
ctgctcctgaccgcccggccccgcggccgcccggcccagagcctgggcaaggccgacgcc
ctgtttgagatggccggcttctccacggagcaggcccgggcctacgtgtcgcgttacttt
gagtgctcgggggccgccgagcaccgagatagagccctggcgctcctccgggaccagccg
tttctcctcagtcacggccacagccctaccgtgtgccgggcagtgtgccagctctcggag
gccctgctggagcaggggcagggggccaggctgcccgccacactcacgggactctacgtg
ggcctgctgggcccggcagtccgcgacggccccccgggggccctggcggagctggccaag
ctggcctgggagctgggccgcagacgccaagggaccctgcgggaggaccggttcccctcc
gtggaggtgaggacctgggctgtggccaagggcttagtgcgacccgccccgggggccgca
gtggccgagctggccttctccagcttcctcctgcagtgcttcctgggggccgtgtggttg
gctctgagcagcgaaatcaagagcaaggagctgccgcagtatttggcactgaccccgagg
aagaagaggccctatgacaactggctggagggcacgccgcgcttcctggccgggctgatc
ttccagcctcgcacccgctgcctgggagccttggccgggccagcggaggccgccttggcg
gaccggaagcggaaggtgctcaccaggtacctgaagcagctgcagccggggacgctgcgg
gccaggcggctgctggaactgctgcactgcgcccacgaggcccaggaggctggcatttgg
cagcacgtggtgcaggagctccccacccgcctgtccttcctgggcacccggctcacgcct
cccgatgcacatgtgctgggcagggccttggaggcggcgggccgagacttctccctggac
cttcgcagcactggcattgacccctctggactggggaacctcgtgggactcagctgtgtc
acccgtttcagggctgccttgagcgacaccgtggggctgtgggagtccctccagcagcgt
ggggagaccaggctactccaggcggcggaggagaagttcaccatcgagcctttcaaagcc
aagtccccgaaggatgtgcaagacctgggcaacctcgtgcagacccagaggacgagaagt
tcctcggaagacacagccggggagctccccgctgttcgggacttaaagaaactggagttt
gcgttgggccccatcgcaggcccccaggccttccccaaactggtgaggatcctcccggcc
ttctcctccctccagcatctggacctggactcgctgagcgagaacaagattggggacgag
ggcgtcgcgcagctctcagccaccctccctcagctgaaggccctggaaaccctcaacctg
tcccagaacagcatcaccgacgtgggtgcctgcaagctcgctgaggccctgccctcgctc
gctgtgtccctgctcaggctgagcttgtacaacaactgcatctgcgatgcgggggccgag
agcctggcccgggtgcttccggacatggtgtccctccgggtgatggacgtccagtacaac
aagttcacggccgccggggcccagcagcttgccgccagcctgcggaagtgtcctcacgtg
gagaccctggcgatgtggacacccaccatcccatttggtgtccaggagcacctgaaacaa
ctggactcacggatcagcctgagatga
DBGET
integrated database retrieval system
