Lemur catta (Ring-tailed lemur): 123632394
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Entry
123632394 CDS
T08326
Symbol
GSPT1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A isoform X1
KO
K03267
peptide chain release factor subunit 3
Organism
lcat
Lemur catta (Ring-tailed lemur)
Pathway
lcat03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123632394 (GSPT1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcat03019
]
123632394 (GSPT1)
03012 Translation factors [BR:
lcat03012
]
123632394 (GSPT1)
Messenger RNA biogenesis [BR:
lcat03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
123632394 (GSPT1)
Translation factors [BR:
lcat03012
]
Eukaryotic type
Release factors
123632394 (GSPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
123632394
NCBI-ProteinID:
XP_045398574
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Position
2:complement(8291250..8318656)
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AA seq
642 aa
AA seq
DB search
MDPGSGGGGGGGGGGGSSSGSSSSESAPDCWDQADMEAPGPGPCGGGGGGPMAAAGAEAQ
REQHLSAAFSRQLNVNAKPFVPNVHAAEFVPSFLRGPAQPPPPPAGAAANNHGAGSGAGG
PSAPVESSQEEHLLCEGSNSAVSMELSEPVVENGETEMSPEESWEHKEEISEVEPEGGSL
GDGRPPEESAHEMMEEEEEIPKPKSVVAPPGAPKKEHVNVVFIGHVDAGKSTIGGQIMYL
TGMVDKRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTIL
DAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIV
LINKMDDPTVNWSNERYEECKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKEQSDFCP
WYIGLPFIPYLDNLPNFNRSVDGPIRLPIVDKYKDMGTVVLGKLESGSICKGQQLVMMPN
KHNVEVLGILSDDVETDTVAPGENLKIRLKGIEEEEILPGFILCDPNNLCHSGRTFDAQI
VIIEHKSIICPGYNAVLHIHTCIEEVEITALICLVDKKSGEKSKTRPRFVKQDQVCIARL
RTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPEKD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggatccgggcagtggcggcggcggcggcggcggcggcggcggcgggagcagcagcggc
agcagcagcagcgagtcggcgcccgattgctgggaccaggcggacatggaagcccccggg
ccgggcccgtgtggtggtggcggcggcggccccatggcggcggcgggggccgaggcccag
cgtgagcagcacctcagtgcggccttcagccggcaactcaacgtcaacgccaagcccttc
gtgcccaacgtccacgccgccgagttcgtgccgtcgttcctccggggtccggcgcagcct
ccgccacctcccgctggcgccgccgccaacaaccacggagccggcagcggcgcgggaggc
ccttcggcacctgtggaatcctctcaagaggaacatttgttgtgtgaaggttcaaattca
gctgttagcatggaactttcagaacctgttgtagaaaatggagagacagaaatgtcccca
gaagaatcatgggagcacaaagaagaaataagtgaagtagagccagagggtggttccttg
ggagatggaaggccaccagaggaaagtgcccatgaaatgatggaggaggaagaggaaata
ccaaaacctaaatctgtggttgcacctccaggtgctcctaaaaaagaacatgtaaacgta
gtattcattgggcatgtagatgctggcaagtcaaccattggaggacaaataatgtatttg
actggaatggttgacaaaaggacacttgaaaagtatgaaagagaagctaaagaaaaaaac
agagaaacttggtacttgtcttgggccttagatacaaatcaggaagaacgagacaagggt
aaaacagtagaagtgggtcgtgcctattttgaaaccgaaaagaagcatttcacaattcta
gatgcccccggccacaagagttttgtcccaaatatgattggtggtgcctctcaagctgat
ttggctgtgctggtaatctcagccaggaaaggagagtttgaaactggatttgaaaaagga
ggacagacaagagaacatgcaatgttggcaaagacagcaggtgtaaaacacttaattgtg
ctcattaataagatggatgatccaacagtaaattggagcaatgagagatatgaagaatgt
aaagagaaactagtgccatttttgaaaaaagttggctttaatcccaaaaaggacattcac
ttcatgccctgctcgggactgactggagcaaatctcaaagagcagtcagatttctgccct
tggtacatcggattaccatttattccatatctggataatttgccaaacttcaatagatca
gttgatggaccaatcaggctgccaattgtggataagtacaaggacatgggcacggtggtc
ctgggaaagctggaatcaggatctatttgtaaaggccagcagctcgtgatgatgccaaac
aagcacaacgtggaagttcttggaatactttctgatgatgtagagactgatactgtagcc
ccaggtgaaaacctcaaaatcagactgaaaggaattgaagaagaggagattcttcccgga
ttcatactttgtgatcctaataatctttgtcattctggacgtacatttgatgcccagata
gtgattatagagcacaaatccatcatctgcccagggtataatgcggtgctgcatattcac
acctgtattgaggaagtggaaataacagccttaatctgcttggtagacaaaaaatcagga
gaaaaaagtaagactcgaccccgttttgtgaagcaagatcaagtatgcattgctcggtta
aggacagcaggaaccatctgccttgagacctttaaagacttccctcagatgggtcgtttt
accttaagagatgagggtaagaccattgcaattggaaaagttctgaaactggttccagag
aaagactaa
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