Lemur catta (Ring-tailed lemur): 123633345
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Entry
123633345 CDS
T08326
Symbol
SHPRH
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH isoform X1
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
lcat
Lemur catta (Ring-tailed lemur)
Brite
KEGG Orthology (KO) [BR:
lcat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lcat04121
]
123633345 (SHPRH)
Enzymes [BR:
lcat01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123633345 (SHPRH)
Ubiquitin system [BR:
lcat04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123633345 (SHPRH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-1st
SHPRH_helical-2nd
Linker_histone
Helicase_C
zf-RING_UBOX
PHD
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
TPR_10
TPR_12
TPR_2
PEP-utilisers_N
Motif
Other DBs
NCBI-GeneID:
123633345
NCBI-ProteinID:
XP_045400482
LinkDB
All DBs
Position
2:complement(130189479..130280454)
Genome browser
AA seq
1684 aa
AA seq
DB search
MSSRRKRAPPVRIDEEKQQQLHWNMHEDRRNEPLTLTDDEYPCPASDATSAHCIILDDGL
KEEVAHRDKKRCSEAVSFSKSIEKEETVGIFSPLSVKLSILITPYHFDNSWKALLGELTL
QLLPEQSLIENFSERSFTLMSSESSNQFLIYVHSECEDVEKQEKGLKEPIHACDKSVLVE
SSFSGEMLEDLGWLQKKRRIKLYQRPEGNHIIKVGIYLLEAGLAKLDFLSDANSRMKKFN
QLMKRVMEKLYNFIILDALEEDDEDSESEPEGQDIDELYHFVKQTHQQETQSIQVDVQHP
ALTPVLRPYQREAVNWMLQQEYFRSTPTGESTLHFLWREIITSEGLKLYYNPYTGCIIRE
FPNSGPQLLGGILADEMGLGKTVEVLALILTHTRQDVKQDALTLPEGKVVNYFIPSHFGG
KVKDKEIQNIEIEPKEKVQCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSMYRYDVQRN
RSLLKRMLKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDICDKTKKQAVGSPRKIQKESR
KSGNKDTDSEYLPSNTSDDDDDDPYYYYYKPKRNRSKFRKKPVLSIKKGKSQPNSNSDSQ
GHCPATSDSGIDVTTSESICVSKFKQEHEAKDYGESLNPAGSDVPYSNVMSPCNTADYRF
ECICGELDQMDRKPRVQCLKCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMEPVSTRATL
IISPSSICHQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSEL
NYVDIPHSNSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPAVKAAEMAQRLS
GINRWCISGTPVQRGLEDLFGLVVFLGIEPYCVKHWWVRLLYRPYCKKNPQHLYTFIAKI
LWRSAKKDVIDQIQIPPQTEEIHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKL
SSLDRRTVTSILYPLLRLRQACCHPQAVRGEFLPLQKSTMTMEELLTSLQKKCGTECEEA
HRQLVCALNGLAGIHIIKGEYASAAELYREVLRSSEEHKGKLKTDSLQRLHATHNLMELL
IAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALQPVQQTIRELQRKIHSNS
PWWLNVIHRAIEFTIDEELVQRVRNEITSNYKQQTGKLSMSEKFRDCRGLQFLLTTQMEE
LYKFQKLVREAVKNLEGPPSRNIIESATICHLRPTRLPLNCCVFCKADELFTEYESKLFS
NTVKGQTAIFEEMIEDEEGLVDDRVPTTTRGLWAISETERSMKAILSFAKSHRFAVEFID
EGSTSMDLFEAWKKEYKLLHEYWMALRNRVSAVDELAMATERLRVRDPREPKPSPPVLHI
IEPHEVEQNRVKLLNDKAVATSQLQKKLGQLLYLTNLEKSQDKTSGGINPEPCPICARQL
GKQWAVLTCGHCFCNECISIIIEQYSVGSHRSSIKCAICRQTTSHREISYVFTSEKASQE
EDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDIISKALTDNNMEFAQIS
RVKTFQENLSAFKRDPQINILLLPLHTGSNGLTIIEATHVLLVEPILNPAHELQAIGRVH
RIGQTKPTIVHRFLIKATIEERMQAMLKTAEKSHTNSSVKHSEASVLTVADLADLFTKET
EELE
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagacggaaacgtgctcctccagtgaggatagatgaagaaaagcagcagcag
cttcactggaatatgcatgaggacagaaggaatgaacctctcaccttaactgatgatgag
tatccctgcccggcttcagatgccacttctgctcattgcatcatcctagatgatggtcta
aaggaagaggtggctcacagagataagaagaggtgttcagaggcagtgagcttctcaaaa
tcaatcgaaaaagaagagactgtgggtattttttcccctttgtctgtaaaattgagtatt
ttgattactccatatcactttgataattcttggaaagcacttctgggagaattaactctt
cagcttcttcctgaacagagtttaattgaaaatttttctgaaaggagttttacattgatg
agttcagagtcaagcaatcagttcctgatctatgttcattcagaatgtgaagatgtagag
aaacaggaaaaagggctcaaagaaccaatccatgcttgtgacaagagtgttctagtggaa
tcatccttcagtggtgaaatgttagaagatttggggtggctacaaaagaagagaaggata
aaactttaccaaagaccagaaggaaatcacattatcaaggttggaatttatcttttggaa
gctggcctagcaaaactagactttttgagtgatgcaaattcaagaatgaaaaagttcaat
cagctcatgaagagagtgatggaaaagttatacaattttattattctagatgcgttggaa
gaggatgatgaagattcagagagtgaaccagagggacaggacattgatgagctctatcac
tttgtgaagcaaacacatcagcaagaaacacagtccatccaagtggatgtccagcatcct
gcactgacccctgtgttgagaccctaccaaagagaggctgtcaattggatgctacaacaa
gagtatttcagaagcactcctactggtgaaagtaccctgcacttcttatggcgagagatt
attacatctgagggtttgaaactctactataatccatacacaggctgcatcattcgtgaa
ttcccaaattctgggccacagttgcttggtggaatcttagcagatgagatgggccttgga
aaaacagtggaggttttggctctgattctgacacatactcgacaagatgtcaaacaagat
gctctcactcttcctgagggaaaagtggtgaattatttcattccatcacattttggagga
aaagtaaaagacaaagaaatccagaatattgaaattgaaccaaaagaaaaagttcagtgc
ccccctacacgtgtgatgatcctgacagctgtgaaagaaatgaatgggaaaaaaggagtt
tccatcctttccatctataaatatgtcagttctatgtatagatacgatgttcaacggaac
agaagtcttctgaaacggatgctgaaatgtttaatttttgaaggtcttgtgaaacagatc
aaaggccatggtttttctgggacttttacactgggaaagaattataaggaagaggatata
tgtgataaaacaaaaaagcaggcagtagggagtccaaggaaaatccagaaagaatctaga
aaatcagggaacaaggacacagattctgaatacttgccatcaaacacctctgatgatgat
gatgatgatccttactattattattataagcctaagagaaatcgtagtaaattcaggaaa
aagcctgttctatccataaaaaaaggaaaaagtcaaccaaatagcaattctgattcacaa
ggtcactgtccagctaccagtgactctggaattgatgttaccacatctgaaagtatatgt
gtctccaaattcaaacaagaacatgaagcaaaggactatggtgaatctttaaaccctgct
ggtagtgatgtgccatattctaatgtcatgagtccctgtaacaccgctgattatcgcttt
gagtgcatatgtggtgaacttgaccagatggaccgtaagccacgtgttcagtgcctaaaa
tgtcacctgtggcaacatgcaaagtgtgtaaattatgaagagaagaatctgaaggttaag
cctttttactgcccccactgccttgttgcaatggagcctgtgtcaacaagagcaactcta
atcatctctccaagttccatctgtcaccagtgggtggatgagatcaacagacatgtaagg
tcatcatctcttcgagtcttggtatatcaaggagtgaagaaagatggctttttacagcct
cattttttggcagaacaggatatagttatcattacctatgatgtccttcgttcagaacta
aactatgtcgatatcccacatagcaatagtgaggatgggcgtcgcttacggaaccagaaa
cgctatatggctattcccagccccctagtagctgtggagtggtggaggatctgccttgat
gaagctcagatggttgaatgtcctgcggtaaaagctgcagaaatggctcagcgtttgagt
ggaattaatcggtggtgcatcagtggcactccagtacagagaggattggaggatcttttt
gggttagtggtctttcttggtattgaaccttactgtgtcaaacactggtgggttcgactt
ctctatcgcccttactgtaagaagaatcctcagcatctctatacctttattgctaagata
ctgtggaggtctgcaaagaaagatgtgattgaccaaatccagataccaccgcagactgaa
gaaatacactggctccacttttctccagtggaaaggcatttctatcaccgtcagcatgag
gtgtgctgccaggatgcagtggtaaaactcaggaagatttccgactgggctctcaagctc
agcagcctggacagaagaactgtcacctccatcctgtatccattgctgaggctcaggcag
gcctgctgccacccacaggccgttcgtggggagttcttgcctctccaaaaaagcaccatg
acaatggaagaactgctgacatctttgcaaaagaaatgtggaactgaatgtgaagaagca
catcggcagctagtttgtgccctcaatggcttagcaggcatccatatcattaaaggtgag
tatgcctcagcagcagaactatacagagaagtgttgcgctcgtctgaggagcacaaagga
aaactcaaaactgattcacttcaaagacttcatgctacccataacttgatggaattgttg
atagccaagcacccagggatacctcctaccctgcgagatggcagacttgaagaagaggcc
aaacaactacgagagcactatatgagcaagtgtaatacagaagttgctgaagcccagcaa
gctttacagcctgtgcagcagaccatacgtgagcttcaaagaaaaattcattctaattct
ccttggtggctgaatgtgatccacagggcaatagaatttactattgacgaggagcttgtt
cagcgagtgagaaatgaaataaccagcaactataagcaacaaactggcaagctttctatg
tcagagaaatttcgtgactgtagaggtcttcagttcttacttacaacacaaatggaagag
ctatataaattccagaagctagtaagagaagctgtaaaaaacctggagggaccgccatct
cgtaatattattgaatctgcaacaatctgccacctccgaccaactcgacttcctctcaac
tgctgtgtcttttgtaaagctgatgaattattcacagagtatgaatcaaagctattttct
aacacagtcaaaggccagactgcaatatttgaggagatgatagaagatgaggaaggactg
gtagatgatagagtacctaccaccacccggggtctatgggcaataagtgaaacggaacga
tctatgaaagcaatactatcatttgcaaaatcacatagatttgctgttgaattcattgat
gaaggaagtacttcaatggatctctttgaagcatggaagaaggaatataagttacttcat
gaatattggatggctctgaggaatcgtgtatctgctgttgatgaacttgcaatggctacg
gaacgactaagagtgcgtgatcctagggagccaaaacccagtccacctgttcttcatatc
atagaaccacatgaggtagaacaaaatcgtgtaaaactactaaatgataaagccgttgct
acatcacagcttcagaaaaaacttgggcagcttctttacctaactaatttggaaaagtct
caggacaaaacgtcgggaggtattaatccagaaccttgtccaatctgtgctcgacaactg
ggaaaacagtgggcagtattgacctgtgggcactgtttctgtaatgaatgcatttctata
attattgaacagtacagcgtggggtctcacagaagctccattaagtgtgccatctgtcgc
cagaccacatctcacagagagatctcatatgtcttcacctcagagaaagcaagccaggaa
gaagacattcctgtcaagggcagccattctacaaaagtggaagctgtggtcagaactctg
atgaaaatacagcttagagatccaggggcaaaagcacttgttttctcaacgtggcaagat
gtgttagacattatttcaaaagctctcactgacaacaacatggaatttgcacagatcagt
cgtgttaagacattccaggagaacctttcagcatttaaacgtgatccccaaatcaatatt
ttgctgctgcccctgcacacaggttctaatggattaactatcattgaagcaactcatgtt
ctcttggtggagcccatattgaaccctgcccatgagcttcaggccatagggagggtgcac
cgaattggacagacaaaacctactattgtacacagattcttaattaaagcaacaatagaa
gaaagaatgcaggcaatgctgaaaactgctgagaaaagtcacacgaactcatcagtgaag
cattcagaggcctccgtcttgaccgtggctgatctggcagacctgtttaccaaagaaact
gaagagcttgaatga
DBGET
integrated database retrieval system
