Lemur catta (Ring-tailed lemur): 123633383
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Entry
123633383 CDS
T08326
Symbol
SYNE1
Name
(RefSeq) nesprin-1 isoform X1
Organism
lcat
Lemur catta (Ring-tailed lemur)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
SYNE1
Spectrin_SYNE1
KASH
M157_N_1
STIV_B116-like
Motif
Other DBs
NCBI-GeneID:
123633383
NCBI-ProteinID:
XP_045400547
LinkDB
All DBs
Position
2:complement(134923671..135351423)
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AA seq
2999 aa
AA seq
DB search
MFPQELAQKIKGYQEQIASLNSKCKMLTMKAKHATMLLTVTEVEGLAGGTEDLDGELLPA
PSAHPSVVMDIAYFQALSAEKLQTDAARISPSTSTSQEFYEPGLEPSATAKLGDLQRSWE
TLKNVISEKQRTLYEALERQQRYQDSLQSISTKMEAVELKLSESLEPDRSPESQMAEHQS
FLQALMDEILMLQDEINELQSSLAEELLSESRESDPAEQLALQSTLTVLAERMSTIRMKA
SGKRQLLEEKLNDQLEEQRQEQALQRYRCEADELDHWLLSTKATLDTALGALTEPMDMEA
QLVDCQNMLVEIEQKVVALSELSVHNENLLLEGKAHTKEEAEQLAGKLRQLKGSLLELQR
ALHDKQLHMQGTAQEKEESDVDLTATQSPGVQEWLAQARSTRTHQRQSSLQQQKELEQEL
AEQKSLLRSVASRGEEILTQHSAAETSGGAGEKPDVLSQELGMEGEKSSMEDQMRMKWES
LHQEFSTKQKLLQNVLEQEQEQMLYSRPNRLLSGVPLYKGDGQTQDKSAVTSLLDGLNQA
FEEVSSQGGGTKRQSIHLEQKLYDGVSATSTWLDDVEERLFVATALLPEEAETCLFNQET
LAKDIKEMSEEMDKNKNLFAQAFPENGDNRNVIEDTLGCLLGRLSLLDSVVNQRCCQMKE
RLQQILSFQNDLKVLFTSLADNKYIILQKLANVFDQPVAEQIEAIQQAEEGLKELDAGII
ELKRRGDKLQIEQPSVQELSKLQDMYDELTMIIGSRRSGLNQNLTLRSQYERALQDLADL
LETGQEKMAGDQKIIVSSKEEIQQLLDKHKEYFQGLESHMILTETLFRKIISFAVPKETQ
FHTELMAQASAVLKQAHKRGVELEYILETWSHLDEDRQELRRQLEVVEGSIPSVGLVEES
EDRLIDRITLYQHLKSSLSEYQPKLYQVLDDGKRLLISISCSDLESQLNQLGEHWLNNTN
KVSKELHRLETILKHWTRYQSESADLIHWLQSAKEKLEFWTQQSVTVPQELETVRDHLNA
FLEFSKEVDAKSSLKSSVLSTGNQLLRLKKVDTAALRSELSHIDSQWTDLLTNIPAVQEK
LHQLQMDKLPSRHAISEVMSWISLMENVIQKDEDNIKNSIGYKAIHEYLQKYKGFKIDIN
CKQLTVDFVNQSVLQISSQDVESKRSDKTDFAEQLGAMNKSWQILQGLVTEKIQLLEGLL
ESWSDYENNVQGLKTWFETQEKKLKQQQQVGDQASVQNALKDCQDLEDLIKAKEKEVEKI
EQNGLALIQNKKEDVSGVVMSTLRELSQTWANLDHTVGQLKIQLTSVLDQWGSHKVAFDE
INSGLMEARYSLSRFRLLTGSLEAVQVQVDNLQSLQDDLEKQEKSLEKFGSITNQLLKEC
HPPVTETLTNTLKEVNMRWNNLLEEIAEQLHSSKALLQLWQRYKDYSKQCASTVQQQEDR
TNELLKAAANKDIPDDEVATWIQDCNDLLKGLGTVKDSLFVLHELGEQLKQQVDASAASA
IQSDQLSLSQHLCALEQALCKQQTMLQAGVLDYETFAKSLEALEAWIVEAEDLLQGQDPS
HSSDLSTIQERMEELKGQMLKFSSMAPDLDRLNELGYRLPLNDKEIKRMQNLNRHWSLIS
SQTTERFSKLQSFLLQHQTFLEKCETWMEFLVQTEQKLAVEISGNYQHLLEQQRAHELFQ
AEMFSRQQILHSIIIDGQRLLEQGQVDDRDEFNLKLTLLSNQWQGVIRRAQQRRGIIDSQ
IRQWQRYREMAEKLRKWLVEVSYLPMSGLGSVPIPLQQARTLFDEVQFKEKVFLRQQGSY
ILTVEAGKQLLLSADSGAEAALQVELTEIQEKWKSASMSLEEQKKKLAFLLKDWEKCEKG
IADSLEKLRTFKKKLSQPLPDHHEELHAEQTHCKELENAVGSWTDDLTQLTLLKDTLSAY
ISADDISILNERIELLQRQWEELCHQLSLRRQQVSERLNEWAVFSEKNKELCEWLTQMES
KVSQNGDILIEEMIEKLKKDYQEEIAIAQENKIQLQQMGERLAKASHESKASEIEYKLGK
VNDRWQHLLDLIAARVKKLKETLVAVQQLDKNMSSLRTWLAHIESELAKPIVYDSCNSEE
IQRKLNEQQELQRDIEKHSTGVASVLNLCEVLLHDCDACATDAECDSIQQATRNLDRRWR
NICAMSMERRLKIEETWRLWQKFLDDYSRFEDWLKISERTAALPRSSGVIYIVAKEELKT
FEAFQRQVHECLTQLELINKQYRRLARENRTDSACSLKQMVHEGNQRWDNLQKRVTSILR
RLKHFIGQREEFETARDSILVWLTEMDLQLTNIEHFSECDVQAKIKQLKAFQQEISLNHN
KIEQIIAQGEQLIEKSEPLDAAVIEEELDELRRYCQEVFGRVERYHKKLIRLPLPDDEHD
LSDRELELEDSAALSDLHWHDRSADSVLSPQPSSNPSLSLAQPLRSERSGRDTPASVDSI
PLEWDHDYDLSRDLESAVSRTLPSEDEEGQEDKDFYLRGAVGLSDVTIPESPEAYVKLTE
NAIKSTSGDHSALESHMRQLGKALDDSRFQMQQTENIIRSKTPTGPELDTSYKGYMKLLG
ECSGSIDSVKRLEHKLKEEEESLPGFVNLHSTETQTAGVIDRWELIQAQALSKELRMKQN
LQKWQQFNADLNNIWAWLGDTEEELERLQCLELSTDIQTIERQIQKLKELQKAVDHRKAI
ILSINLCSPEFTQADSEESRDLQDRLSRMNGRWDRVCCLLEEWRGLLQDALMQCQDFHEM
SHGLLLMLENIDRRKNEIVPVDSNLDVEILQDHHRQLMQIRRELLESQLKVTSLQDMSCQ
LLVNAEGTDCLEAKEKVHVIGNRLKLLLKEVSRHIKELEKLLDMSSSQQDLSSWSSADEL
DTSGSVSPASGRSTPNRQKTPRGKCSLSQPGPSVSSPHSRSTKGGSDSSLSEPRPARSGR
AFLLRVLRAALPLQLLLLLLIGLACLVPMSEEDYSCALSNNFARSFHPMLRYTNGPPPL
NT seq
9000 nt
NT seq
+upstream
nt +downstream
nt
atgtttcctcaggagctggctcagaaaatcaagggctaccaggagcagatcgcctctttg
aactccaagtgcaagatgctgacgatgaaagccaagcacgccaccatgcttctgacggtg
accgaggtcgaggggctggcgggaggcacggaggacctggatggggagctcctccccgcg
ccctcggcccacccctccgtggtcatggacattgcatatttccaagccttgtctgctgag
aagctgcagacggatgctgcaaggatttcccccagcacatcgacatcccaggagttctat
gaaccgggactggagccatctgctactgctaaactgggtgatttgcagcgttcttgggaa
accttaaagaatgtgatcagtgagaagcagcgcacactctacgaagctctggaacgccag
cagaggtaccaggactcgctccagtccatctccacgaagatggaggccgtggagctgaaa
ctcagtgagagtctcgagcccgacaggagtccggaaagccagatggctgaacatcagtct
ttcctccaggcattgatggatgagattctcatgctccaagatgaaatcaatgagctccag
tcctctctcgcagaggagctgctgtctgagtctcgtgagtcggaccccgcggagcagctg
gccttgcagtccacgctcactgtcttagccgagcgaatgtctaccatcaggatgaaagcc
tcggggaaacggcagcttttggaggagaagctgaatgatcagctggaggagcagaggcag
gaacaggccctgcagaggtatcgctgtgaagccgacgagctggaccactggctgctgagt
accaaggccaccctggacactgcactgggtgcactcacggagcccatggacatggaggcc
cagcttgtggactgccagaacatgctggtggaaatagagcagaaggtggtggccttgtcg
gagctctcagtgcacaacgagaacctgctgctggagggcaaggcgcacaccaaggaagag
gctgagcagctggcagggaagctgaggcagctcaaggggagcctgctggagctgcaaaga
gccctgcacgacaagcagctccacatgcagggaacagcacaagagaaagaggagagcgat
gtcgacctaacagccacccagagccccggcgtgcaggaatggctggcccaagcccgctcc
acacggacccaccagcggcagagcagtctccagcaacaaaaagagttagaacaggaattg
gccgagcagaagagcctcctccgctccgtcgccagccgaggagaggagattctaacccag
cattcggctgcagagacctctggtggcgctggcgaaaaacctgatgtgttatcccaggag
ttgggaatggaaggggagaaatcatccatggaagaccagatgaggatgaaatgggaaagc
cttcatcaggaatttagtaccaagcagaaactactacagaatgttctggaacaggaacaa
gaacaaatgctttacagcagaccaaatcgactcttgtctggcgtgccactgtacaaaggg
gacgggcagacccaagataaatctgcagtcacatctttgctggatggactgaaccaggcc
ttcgaggaggtttcatcccagggtggagggacaaagaggcagagtatacacttggaacag
aagttatatgatggggtctcagctacctctacttggttggacgatgttgaagaacgttta
tttgttgccacagcacttttaccagaagaagcagaaacttgtctcttcaaccaagagact
cttgccaaagacattaaggaaatgtctgaagaaatggacaagaacaagaacttgtttgca
caagcctttccagagaatggcgataatcgaaatgttattgaagataccttgggttgtctt
ttgggcaggttgtctttgctagactcagtagtgaatcagcgttgttgtcagatgaaggaa
agacttcagcaaatactaagcttccagaatgatctgaaggtgctatttacatccctggct
gacaacaaatacatcattctgcagaaactggcaaatgtgtttgaccagcctgtggcagaa
caaatagaggcaatacaacaggctgaagagggactaaaggaattggatgcagggatcatt
gaattgaaaaggcgtggggacaagttacagatcgagcagccttccgtgcaagaactctcc
aaactgcaggacatgtacgacgagctgacgatgatcattggctcccggcgcagtggcctg
aaccagaacctcacactgaggagtcagtatgaaagggccctgcaggatctggctgacctg
ctggaaactggtcaggagaagatggcaggggaccagaaaatcatcgtgtcttccaaagag
gaaatccaacaactgcttgacaaacataaggaatactttcagggcctggagtctcacatg
atcttgactgaaacactcttcaggaagatcatcagctttgcagtcccaaaggaaacccaa
ttccatacggaactgatggcgcaggcttccgctgttctgaaacaggctcacaagaggggc
gtggagctggagtacattctggagacgtggtcccatctggacgaggaccgccaggagctc
cgcagacagctggaggtggtagaaggcagcatcccgagtgtgggcctggtggaggagagc
gaggacaggctcatcgaccggataacactctaccagcacttaaaatctagcctcagtgaa
taccagcccaaattatatcaggtattagatgatggcaaacgacttctgatatccatcagc
tgctcagatctggaaagccagctgaatcagcttggagaacactggctgaataataccaat
aaagtgtctaaggaacttcacagattggaaacaatattgaaacactggaccagatatcaa
agtgaatctgcagatctaattcactggttacaatctgcaaaagaaaagctagaattttgg
actcagcaatctgtgacagtcccacaagagctggaaacggtccgtgatcatctaaatgct
ttcctggagttttcgaaagaagtagatgccaaatcttccctgaaatcatctgtcctgagc
actggaaatcagcttcttcgattaaagaaggtggacacagcggcactgcgctctgagctg
tcgcacatcgacagccagtggactgacctgctgaccaacattccagccgtgcaggagaag
ctccaccagctccaaatggataagctgccttcccgccatgccatttctgaagtcatgagt
tggatttctctaatggaaaatgttattcaaaaggatgaagataatataaagaattccata
ggttacaaagcaattcatgaataccttcagaaatataagggttttaagatagacattaac
tgtaaacagttgacggttgattttgtgaaccagtccgtgctacaaatcagcagtcaggat
gtggaaagtaaacgtagtgataagaccgattttgctgagcaacttggagcaatgaataaa
agttggcaaatcttgcaaggtctagtaactgagaagatccagctgttggaaggcttactg
gaatcttggtcagactatgaaaacaatgtacaaggtctgaaaacttggtttgaaactcag
gaaaagaaactaaaacaacaacagcaagttggagatcaggcctctgtccagaatgcactg
aaagactgtcaggatctggaagatttgattaaagcaaaagaaaaagaagtagagaaaatt
gagcagaatggacttgctttgattcagaacaagaaagaagacgtctctggcgttgtcatg
agcacactgcgggaactcagccaaacctgggcaaatttagaccacacggtcgggcaatta
aagatacagttgacgtcggtgcttgaccagtggggcagtcacaaagtggcctttgacgag
ataaacagtggcctcatggaggccaggtattctctttcccgattccgtctgctcaccggc
tccctagaagctgtgcaagttcaggtcgacaatcttcagagtcttcaagatgatctagaa
aaacaggaaaagagcttagagaaatttggctctatcaccaaccagctattaaaagagtgt
cacccacctgtgacagaaactcttaccaatacactgaaggaagtcaatatgagatggaat
aacttgttggaagagattgccgagcagctgcactccagcaaggccctgcttcagctttgg
caaagatacaaggactactccaaacagtgtgcttccacggtgcagcagcaggaggatcga
accaacgagctcttgaaggcagccgctaacaaagacatccctgatgatgaagttgctacg
tggattcaagactgcaacgacctcctcaaaggattggggacagtcaaggattcccttttt
gttctccatgagctgggagagcaactcaagcaacaagtggatgcttcggctgcatcagcc
attcaatctgatcaactctctctgagtcaacacttatgtgccctagagcaggctctttgc
aaacagcagactatgttacaggctggagttcttgactatgaaacctttgccaagagttta
gaagctttggaggcctggatagtggaagctgaagacctcctgcaaggacaggaccccagc
cactcgtctgacctctccaccatccaggaaaggatggaggaacttaagggacagatgtta
aaattcagcagcatggctccagatttagaccgtctaaatgagcttggatataggttacct
ctgaatgataaggaaatcaaaaggatgcagaatctgaaccgccattggtctctgatctcc
tctcagactacagaaagattcagtaagttgcagtcatttttgctacaacatcagactttc
ctggaaaaatgtgaaacatggatggaattcctggttcaaacggaacaaaagttagcagta
gagatttcaggcaattatcagcatcttttagaacagcagagagcacatgagttgtttcaa
gccgagatgttcagtcgtcagcagattttgcactcgatcattattgatgggcagcgtctt
ctagaacaaggtcaagttgatgacagggatgagttcaacctgaagttgacgctgctcagc
aatcagtggcagggagtgattcgcagggcccagcagaggcggggcatcatcgacagccag
attcgccagtggcagcgctacagggagatggcagaaaagcttcgtaaatggctggttgaa
gtgtcctacctccccatgagcggtctcggaagcgtccctataccactgcagcaagcgagg
accctctttgatgaagtgcagttcaaagaaaaagtgttcctgcgacagcaaggcagttac
atcctaactgtggaggccggcaagcagctcctgctctctgcagacagtggagctgaggcc
gctttgcaggtggaactcactgaaatccaagagaaatggaaatcagccagcatgagtctg
gaggaacagaagaaaaaactggccttcttgttgaaagactgggaaaaatgtgagaaagga
atagctgattctctggagaaactgcgaactttcaaaaagaagctttctcagcctctgcca
gatcaccacgaagagctccacgcagaacaaacacattgcaaggaattagagaatgcagtt
gggagctggacagatgacttgacacagctgacgctgctgaaggacaccctctctgcgtac
atcagtgccgatgacatctccatccttaatgaacgcatagaacttctgcaaagacagtgg
gaagaactatgccaccagctctccttgaggcggcagcaagtaagtgaaagactgaacgag
tgggcagtcttcagtgagaagaacaaggagctttgtgagtggttgactcaaatggaaagc
aaagtgtcccaaaatggcgacatcctcattgaggaaatgatcgagaagctcaagaaggat
tatcaagaagaaattgctattgcccaagagaacaaaatacagctccagcaaatgggagaa
cgtcttgccaaagccagccacgaaagcaaagcatccgagattgaatacaagcttggaaag
gtcaacgaccggtggcagcatctcctagacctcattgcagccagggtgaagaagctgaag
gagaccctggtggccgtgcagcagctcgataagaacatgagcagcctgaggacttggctc
gctcacatcgagtcagagctggccaagccaatagtctacgattcctgtaactcggaagaa
atacagagaaagctcaacgagcagcaggagcttcagagagacatagagaagcacagtaca
ggcgtcgcctctgttctcaacctgtgtgaagtcctgctgcacgactgtgacgcttgtgcc
actgacgccgagtgcgactccatccagcaggctacgagaaacctggaccggcggtggaga
aatatctgtgccatgtccatggaaaggaggctcaaaatcgaagagacgtggcgattgtgg
cagaagtttctggatgactattcccgttttgaagattggctgaagatttcagaaaggaca
gctgctctccctaggtcttctggggtgatctatatagttgccaaggaagaactaaagaca
tttgaggctttccagcgacaggtccacgagtgcctgacgcagctggaactgatcaacaag
cagtaccgccgcctggccagagagaatcgcaccgactccgcgtgcagcctcaaacagatg
gttcacgaaggcaaccagagatgggacaacctgcaaaagcgcgtcacctccatcctgcgc
agactcaagcattttattggccagcgggaggagtttgagaccgcacgggacagcatcttg
gtctggctcacagagatggacctgcagctcacgaacatcgagcacttttctgagtgtgat
gtgcaagctaaaatcaagcagctcaaggccttccagcaggaaatttcactgaaccacaat
aagattgagcagataatcgcccagggagaacagctgatagaaaagagcgagcccttggac
gcggccgttatcgaggaagagttggatgagctccgacgatactgtcaggaggttttcggg
cgcgtggaaagatatcacaagaaattgatccgcctgcctctcccagacgatgagcacgac
ctctcggacagggagctggagctggaagactctgcggctctctcggacctgcactggcac
gaccgctctgcagacagcgtgctgtccccgcagccctcctccaacccctcgctctcactc
gcccagcccctgcggagcgagcggtcggggcgagacacccccgccagtgtggactccatc
cccctggagtgggatcatgactatgacctcagtcgggacctggagtctgcagtgtccaga
accctgccctctgaggacgaagagggtcaggaggacaaagatttctacctcaggggagcc
gttggcttatcagatgtaaccatccccgaaagccctgaggcctatgtaaaactcacagaa
aatgcaatcaaaagtacctctggggatcacagcgccttagagtcacacatgcgacaactg
ggcaaagccctggatgacagccggtttcagatgcagcaaactgaaaatatcatccgaagc
aaaactcccacggggccggagctagacaccagctacaaaggctacatgaaactcctgggt
gagtgcagtggcagcatagactccgtgaagagattggaacacaaactgaaggaggaagaa
gagagccttcctggctttgttaacctgcatagtaccgagacccaaacagctggtgtcatt
gaccggtgggagcttatccaggcccaggccctgagcaaggagttgaggatgaagcagaac
ctccagaagtggcagcagttcaatgcggacctgaacaacatctgggcctggctgggggac
acagaggaggaattggaacggctccagtgcctggaactcagcaccgacatccagaccata
gagcgccaaatccaaaagctcaaggagctccagaaagctgtggaccaccgcaaagccatc
atcctctccatcaatctctgcagccccgagttcacccaggctgacagcgaggagagccgg
gacctgcaggaccgcttgtcccggatgaacgggcgctgggaccgggtgtgctgtctgctg
gaggagtggcggggcctgctgcaggacgcgctgatgcagtgtcaggatttccatgaaatg
agccatggtttgcttcttatgctggagaacatcgacagaaggaaaaatgaaattgtccct
gttgattctaaccttgatgtggagatactccaggaccatcacagacagcttatgcaaata
cggcgtgaactgttggagtcccagctcaaagtgacctcattgcaagacatgtcttgccaa
ctgctggtgaatgctgaaggcacagactgtttagaagccaaagaaaaagtgcatgttatt
ggaaatcggctcaaacttcttttgaaggaggtcagtcgtcatatcaaggaactggagaag
ttattagacatgtcaagcagtcagcaggatttgtcttcctggtcttctgctgatgagctg
gacacctcgggatctgtgagccctgcatcgggaagaagcaccccaaacagacagaaaacg
ccacgaggcaagtgtagtctctcacagcctggaccctctgtcagcagtccacatagcagg
tccacaaaaggtggttccgattcctccctttctgagcctcggccggctcggtcgggccga
gccttcctgttgagagtcctccgagccgctcttccccttcagcttctcttgctgctcctc
atcgggctggcctgcctcgtaccgatgtcagaggaggactacagctgcgccctctccaac
aactttgcccggtcattccaccccatgctcagatacacaaacggccctcccccgctctga
DBGET
integrated database retrieval system